Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11h18
         (683 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          30   0.024
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      30   0.024
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          30   0.024
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    23   3.6  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    23   3.6  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 29.9 bits (64), Expect = 0.024
 Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
 Frame = +2

Query: 263 YDRIKKLLVSYEWSDCNFC-VSGKKFKAHKLILEPEIFQLILNYIYTDNVDITSIEQAFD 439
           Y + K+ L  Y   + NF  VS +     KLI   + F+ +LN    + V I S  +A +
Sbjct: 428 YHKYKENLPKYTTEELNFPGVSIESVTVDKLITYFDHFESMLN----NGVSIQSHAKAKN 483

Query: 440 LLYASRKYLLEHLTKTCIEYIKENVTIDNVIEVLNYPDY 556
            +  +R+Y L H   T    +  +  +  ++ +   P Y
Sbjct: 484 TMIKARQYRLNHKPFTYHIVVNSDKNVKGMVRIFLGPKY 522


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 29.9 bits (64), Expect = 0.024
 Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
 Frame = +2

Query: 263 YDRIKKLLVSYEWSDCNFC-VSGKKFKAHKLILEPEIFQLILNYIYTDNVDITSIEQAFD 439
           Y + K+ L  Y   + NF  VS +     KLI   + F+ +LN    + V I S  +A +
Sbjct: 428 YHKYKENLPKYTTEELNFPGVSIESVTVDKLITYFDHFESMLN----NGVSIQSHAKAKN 483

Query: 440 LLYASRKYLLEHLTKTCIEYIKENVTIDNVIEVLNYPDY 556
            +  +R+Y L H   T    +  +  +  ++ +   P Y
Sbjct: 484 TMIKARQYRLNHKPFTYHIVVNSDKNVKGMVRIFLGPKY 522


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 29.9 bits (64), Expect = 0.024
 Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
 Frame = +2

Query: 263 YDRIKKLLVSYEWSDCNFC-VSGKKFKAHKLILEPEIFQLILNYIYTDNVDITSIEQAFD 439
           Y + K+ L  Y   + NF  VS +     KLI   + F+ +LN    + V I S  +A +
Sbjct: 54  YHKYKENLPKYTTEELNFPGVSIESVTVDKLITYFDHFESMLN----NGVSIQSHAKAKN 109

Query: 440 LLYASRKYLLEHLTKTCIEYIKENVTIDNVIEVLNYPDY 556
            +  +R+Y L H   T    +  +  +  ++ +   P Y
Sbjct: 110 TMIKARQYRLNHKPFTYHIVVNSDKNVKGMVRIFLGPKY 148


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +2

Query: 230 NENSCNNRASLYDRIKKLLVSYEWSDCNFCVSGKKFKAHKLI 355
           +E  C N       +KK+L     + CN C   +K  A+K++
Sbjct: 49  DEGPCTNEGR---ELKKILPDALSTGCNKCNEKQKHTANKVV 87


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +2

Query: 230 NENSCNNRASLYDRIKKLLVSYEWSDCNFCVSGKKFKAHKLI 355
           +E  C N       +KK+L     + CN C   +K  A+K++
Sbjct: 49  DEGPCTNEGR---ELKKILPDALSTGCNKCNEKQKHTANKVV 87


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,767
Number of Sequences: 438
Number of extensions: 3666
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)