Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11h18
(683 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g19330.1 68418.m02303 armadillo/beta-catenin repeat family pr... 53 2e-07
At5g19330.2 68418.m02304 armadillo/beta-catenin repeat family pr... 46 2e-05
At5g13060.1 68418.m01497 armadillo/beta-catenin repeat family pr... 46 2e-05
At3g03740.1 68416.m00379 speckle-type POZ protein-related contai... 32 9e-05
At5g21010.1 68418.m02497 speckle-type POZ protein-related contai... 33 7e-04
At2g39760.1 68415.m04882 speckle-type POZ protein-related contai... 32 0.003
At3g43700.1 68416.m04664 speckle-type POZ protein-related contai... 35 0.058
At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Inter... 31 0.94
At1g01640.2 68414.m00082 speckle-type POZ protein-related contai... 30 1.6
At1g01640.1 68414.m00081 speckle-type POZ protein-related contai... 30 1.6
At3g27500.1 68416.m03438 DC1 domain-containing protein contains ... 29 2.2
At3g06190.2 68416.m00712 speckle-type POZ protein-related simila... 29 2.2
At3g06190.1 68416.m00711 speckle-type POZ protein-related simila... 29 2.2
At1g21780.1 68414.m02726 BTB/POZ domain-containing protein Conta... 29 2.2
At5g58550.1 68418.m07333 tetratricopeptide repeat (TPR)-containi... 28 5.0
At2g04740.1 68415.m00484 ankyrin repeat family protein contains ... 28 5.0
At1g27360.2 68414.m03333 squamosa promoter-binding protein-like ... 28 6.6
At1g27360.1 68414.m03332 squamosa promoter-binding protein-like ... 28 6.6
At1g02980.1 68414.m00268 cullin family protein similar to cullin... 28 6.6
At5g19000.1 68418.m02257 speckle-type POZ protein-related contai... 27 8.8
At5g15020.1 68418.m01761 paired amphipathic helix repeat-contain... 27 8.8
At1g55760.1 68414.m06384 BTB/POZ domain-containing protein Inter... 27 8.8
>At5g19330.1 68418.m02303 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 710
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/81 (32%), Positives = 48/81 (59%)
Frame = +2
Query: 365 EIFQLILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTIDNVIEVLN 544
E+F+L++ +IYT +VDIT+ E + DLL A+ +YLLE L + C I +++T++++ ++
Sbjct: 590 EVFELMMRFIYTGSVDITN-EISKDLLRAADQYLLEGLKRLCEYTIAQDITLESIGDMYE 648
Query: 545 YPDYMHDKQLTTYAVNLFCAH 607
+ H L + H
Sbjct: 649 LSEAFHAMSLRQACIMFILEH 669
>At5g19330.2 68418.m02304 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 636
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/64 (40%), Positives = 41/64 (64%)
Frame = +2
Query: 365 EIFQLILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTIDNVIEVLN 544
E+F+L++ +IYT +VDIT+ E + DLL A+ +YLLE L + C I + +T + + LN
Sbjct: 542 EVFELMMRFIYTGSVDITN-EISKDLLRAADQYLLEGLKRLCEYTIAQYLTKSDTV-TLN 599
Query: 545 YPDY 556
Y
Sbjct: 600 MKGY 603
>At5g13060.1 68418.m01497 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 709
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/63 (34%), Positives = 38/63 (60%)
Frame = +2
Query: 365 EIFQLILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTIDNVIEVLN 544
E+F+L++ +IY+ ++I A DLL A+ +YLLE L + C I + + +DN+ E+
Sbjct: 589 EVFELMMKFIYSGRINIAK-HLAKDLLVAADQYLLEGLKRQCEYTIAQEICLDNIPEMYE 647
Query: 545 YPD 553
D
Sbjct: 648 LAD 650
>At3g03740.1 68416.m00379 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 465
Score = 32.3 bits (70), Expect(2) = 9e-05
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +2
Query: 281 LLVSYEWSDCNFCVSGKKFKAHKLIL 358
LL + + SD F VSG+KF+AH+L+L
Sbjct: 209 LLENEDGSDITFNVSGEKFRAHRLVL 234
Score = 31.1 bits (67), Expect(2) = 9e-05
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 15/81 (18%)
Frame = +2
Query: 356 LEPEIFQLILNYIYTDNV--DITSIEQ-------------AFDLLYASRKYLLEHLTKTC 490
+EP++F+ +L+YIY D + D S A LL A+ KY L L+ C
Sbjct: 261 MEPKVFKALLHYIYKDALIEDAESSSSSGSSVGPSASDTLAAKLLGAADKYKLPRLSLMC 320
Query: 491 IEYIKENVTIDNVIEVLNYPD 553
+ +++++D+V +L D
Sbjct: 321 ESVLCKDISVDSVANILALAD 341
>At5g21010.1 68418.m02497 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 410
Score = 32.7 bits (71), Expect(2) = 7e-04
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +2
Query: 281 LLVSYEWSDCNFCVSGKKFKAHKLIL 358
LL S E SD F ++G+KF AHKL+L
Sbjct: 191 LLDSMEGSDITFNIAGEKFLAHKLVL 216
Score = 27.5 bits (58), Expect(2) = 7e-04
Identities = 22/90 (24%), Positives = 46/90 (51%), Gaps = 17/90 (18%)
Frame = +2
Query: 356 LEPEIFQLILNYIYTDNV--DI----------TSIEQAFD-----LLYASRKYLLEHLTK 484
LEP++F+ +L ++Y D++ D+ + + ++ +L A+ KY L L
Sbjct: 243 LEPKVFKALLQFMYKDSLPEDVEPATAHTFERLKLSEIYETLIVKVLAAADKYDLIRLRL 302
Query: 485 TCIEYIKENVTIDNVIEVLNYPDYMHDKQL 574
C +I + V++ +V ++L D + K+L
Sbjct: 303 LCESHICKGVSVKSVAKILALADRYNAKEL 332
>At2g39760.1 68415.m04882 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 408
Score = 32.3 bits (70), Expect(2) = 0.003
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 11/96 (11%)
Frame = +2
Query: 356 LEPEIFQLILNYIYTD---NV-DITSIEQAFD-------LLYASRKYLLEHLTKTCIEYI 502
+EP IF+ +L++IYTD NV +IT A LL A+ Y L L C +
Sbjct: 240 IEPSIFKAMLSFIYTDVLPNVHEITGSTSASSFTNMIQHLLAAADLYDLARLKILCEVLL 299
Query: 503 KENVTIDNVIEVLNYPDYMHDKQLTTYAVNLFCAHA 610
E + +DNV L + QL + + + A
Sbjct: 300 CEKLDVDNVATTLALAEQHQFLQLKAFCLEFVASPA 335
Score = 25.8 bits (54), Expect(2) = 0.003
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +2
Query: 272 IKKLLVSYEWSDCNFCVSGKKFKAHKLIL 358
+K LL S D F V + +KAHKLIL
Sbjct: 184 LKDLLDSEVGCDIAFQVGDETYKAHKLIL 212
>At3g43700.1 68416.m04664 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 415
Score = 34.7 bits (76), Expect = 0.058
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Frame = +2
Query: 278 KLLVSYEWSDCNFCVSGKKFKAHKLIL--EPEIFQ-LILNYIYTDNVDI 415
KLL + + SD F V+G+KF+AHKL+L + F+ + N + +N D+
Sbjct: 197 KLLDTLQGSDVTFDVAGEKFQAHKLVLAARSQFFRSMFYNTLAENNSDV 245
>At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to POZ 56
protein (GI:17483747) [Mus musculus]
Length = 243
Score = 30.7 bits (66), Expect = 0.94
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 389 YIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTIDN 526
Y+YT + + A DLL S KY ++HL C ++ ++ DN
Sbjct: 126 YLYTAEACLDE-QMACDLLVMSEKYQVKHLKSYCERFLVTKLSPDN 170
>At1g01640.2 68414.m00082 speckle-type POZ protein-related contains
Pfam profile:PF00651 BTB/POZ domain; similar to
Speckle-type POZ protein (SP:O43791) [Homo sapiens]
Length = 207
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = +2
Query: 380 ILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTIDNVIEVLNYPDYM 559
+L ++Y+ N+ Q L A+ KY + +L C + +++ NV+++L
Sbjct: 81 LLEFLYSGNLK-APYNQYRSLYLAADKYDISYLQDVCRNHFIASLSSRNVLDILELASIP 139
Query: 560 HDKQLTTYAVNLFCAH 607
D L A+N H
Sbjct: 140 CDTILKDAAINHIVKH 155
>At1g01640.1 68414.m00081 speckle-type POZ protein-related contains
Pfam profile:PF00651 BTB/POZ domain; similar to
Speckle-type POZ protein (SP:O43791) [Homo sapiens]
Length = 207
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = +2
Query: 380 ILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTIDNVIEVLNYPDYM 559
+L ++Y+ N+ Q L A+ KY + +L C + +++ NV+++L
Sbjct: 81 LLEFLYSGNLK-APYNQYRSLYLAADKYDISYLQDVCRNHFIASLSSRNVLDILELASIP 139
Query: 560 HDKQLTTYAVNLFCAH 607
D L A+N H
Sbjct: 140 CDTILKDAAINHIVKH 155
>At3g27500.1 68416.m03438 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 609
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -1
Query: 566 CHACSLDNSILQ*HCQW*RFL*CIQCMF*SNVPVSIS 456
CH C D L HC +F +QC S+ PV++S
Sbjct: 199 CHICGEDTGNLLYHCDICKFNLDLQCAIKSSPPVALS 235
>At3g06190.2 68416.m00712 speckle-type POZ protein-related similar
to SPOP (novel nuclear speckle-type protein)
(SP:O43791) [Homo sapiens]; contains Pfam PF00651 :
BTB/POZ domain; contains Pfam PF00917: MATH domain
Length = 295
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 254 ASLYDRIKKLLVSYEWSDCNFCVSGKKFKAHKLIL 358
+ L + KLL S + +D F V G+ F AHKL+L
Sbjct: 186 SGLGQQFGKLLESGKGADVTFEVDGETFPAHKLVL 220
>At3g06190.1 68416.m00711 speckle-type POZ protein-related similar
to SPOP (novel nuclear speckle-type protein)
(SP:O43791) [Homo sapiens]; contains Pfam PF00651 :
BTB/POZ domain; contains Pfam PF00917: MATH domain
Length = 406
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 254 ASLYDRIKKLLVSYEWSDCNFCVSGKKFKAHKLIL 358
+ L + KLL S + +D F V G+ F AHKL+L
Sbjct: 186 SGLGQQFGKLLESGKGADVTFEVDGETFPAHKLVL 220
>At1g21780.1 68414.m02726 BTB/POZ domain-containing protein Contains
similarity to gb|AJ000644 SPOP (speckle-type POZ
protein) from Homo sapiens and contains a PF|00651
BTB/POZ domain. ESTs gb|T75841, gb|R89974, gb|R30221,
gb|N96386, gb|T76457, gb|AI100013 and gb|T76456 come
from this gene;supported by full-length
Length = 326
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +2
Query: 380 ILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTIDNVIEVL 541
+L+Y+Y + + LL A+ KY + L C E + E++ NV+E L
Sbjct: 215 LLSYLYGNITQEEFWKHRLALLGAANKYDITDLKAACEESLMEDINSSNVLERL 268
>At5g58550.1 68418.m07333 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 925
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +2
Query: 377 LILN-YIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVT-IDNVIEVLNY 547
L LN Y VD+ +E F+LL + K+ + L C + +VT +D + + Y
Sbjct: 261 LALNIYSRIKRVDLFRVETVFELLQLASKFCCDDLKSECEARLAASVTDLDKALTFVEY 319
>At2g04740.1 68415.m00484 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 578
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +2
Query: 356 LEPEIFQLILNYIYTDNVDITSIEQAFDLLYASRKYLL 469
L E F+ ++ Y+YTD + + QA ++ + +YLL
Sbjct: 393 LSAEAFEKMIEYMYTDGLKEINPNQAEEIFDVASRYLL 430
>At1g27360.2 68414.m03333 squamosa promoter-binding protein-like 11
(SPL11) identical to squamosa promoter binding
protein-like 11 [Arabidopsis thaliana] GI:5931665;
contains Pfam profile PF03110: SBP domain
Length = 393
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 533 EVLNYPDYMHDKQLTTYAVNLFCAHAYYLFQRHIQVISPLCLKDCTPE 676
+V Y +H+ Q A++L + L Q H+Q S LC D P+
Sbjct: 346 DVGEYSGVLHESQDIHRALSLLSTSSDPLAQPHVQPFSLLCSYDVVPK 393
>At1g27360.1 68414.m03332 squamosa promoter-binding protein-like 11
(SPL11) identical to squamosa promoter binding
protein-like 11 [Arabidopsis thaliana] GI:5931665;
contains Pfam profile PF03110: SBP domain
Length = 393
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 533 EVLNYPDYMHDKQLTTYAVNLFCAHAYYLFQRHIQVISPLCLKDCTPE 676
+V Y +H+ Q A++L + L Q H+Q S LC D P+
Sbjct: 346 DVGEYSGVLHESQDIHRALSLLSTSSDPLAQPHVQPFSLLCSYDVVPK 393
>At1g02980.1 68414.m00268 cullin family protein similar to cullin 1
[Homo sapiens] GI:3139077; contains Pfam profile
PF00888: Cullin family
Length = 742
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = -3
Query: 258 LARLLHEFSFFKYPILNLMIQEPRARIMS 172
LARLLH S KY IL I+EP +R +S
Sbjct: 609 LARLLHSLSCLKYKIL---IKEPMSRNIS 634
>At5g19000.1 68418.m02257 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 442
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 254 ASLYDRIKKLLVSYEWSDCNFCVSGKKFKAHKLIL 358
++L ++ LL S + D F V G+ F AHKL+L
Sbjct: 187 SNLGQQLGNLLESGKGCDVVFQVDGETFNAHKLVL 221
>At5g15020.1 68418.m01761 paired amphipathic helix repeat-containing
protein similar to transcription co-repressor Sin3
[Xenopus laevis] GI:4960210; contains Pfam profile
PF02671: Paired amphipathic helix repeat
Length = 1377
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +2
Query: 332 KFKAHKLILEPEIFQLILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTK 484
+F+ ++L+ + F ILN DN DIT + L+ LLE T+
Sbjct: 147 RFQHNELVYKS--FLEILNMYRKDNKDITEVYNEVSTLFEDHSDLLEEFTR 195
>At1g55760.1 68414.m06384 BTB/POZ domain-containing protein Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to POZ 56
protein (GI:17483747) [Mus musculus]
Length = 329
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +2
Query: 374 QLILNYIYTDNVDITSIEQAFDLLYASRKYLLEHLTKTCIEYIKENVTIDNVIEVL 541
Q L+YIY + + + LL A+ KY + L + C + +++ NV+E L
Sbjct: 216 QAFLSYIYGNIQNEDFLIHRLALLQAAEKYDIADLKEACHLSLLDDIDTKNVLERL 271
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,464,121
Number of Sequences: 28952
Number of extensions: 256464
Number of successful extensions: 598
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1447936096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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