Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11h11
         (257 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   1.6  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   1.6  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   1.6  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   2.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    20   4.9  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    19   6.5  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    19   6.5  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    19   6.5  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          19   6.5  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    19   6.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    19   8.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    19   8.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    19   8.6  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    19   8.6  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    19   8.6  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    19   8.6  

>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 1.6
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 36  TIFHTTAILH 65
           T++HTTA LH
Sbjct: 155 TLYHTTAYLH 164


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 1.6
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 36  TIFHTTAILH 65
           T++HTTA LH
Sbjct: 155 TLYHTTAYLH 164


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 1.6
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 36  TIFHTTAILH 65
           T++HTTA LH
Sbjct: 155 TLYHTTAYLH 164


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 2.8
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +3

Query: 84  KEKRATNSFLFYIFYKACNVTLFYNLYKVIHNISET 191
           KEK     ++ Y FYK  +     + +   HN++ T
Sbjct: 421 KEKADFQYYVSYDFYKMNHPVYHKDPHYGFHNVTNT 456


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 19.8 bits (39), Expect = 4.9
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -3

Query: 252 FLLEATFIL*IYTLVCSHNKMFQIYY 175
           F +   F+L IY   C+   +  IYY
Sbjct: 275 FTMHLLFLLCIYYFYCALIILLCIYY 300


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 19.4 bits (38), Expect = 6.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 70  RKVFRRKKGLQTHS 111
           R  F RK+G QT++
Sbjct: 237 RSQFERKRGRQTYT 250


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 19.4 bits (38), Expect = 6.5
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -2

Query: 178 LCITLYKL 155
           LC+T+YKL
Sbjct: 264 LCLTMYKL 271


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 19.4 bits (38), Expect = 6.5
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +3

Query: 60  LHSPKGVSKEKRATNSF 110
           +  PKG S  KRA  ++
Sbjct: 76  MERPKGASNGKRARTAY 92


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 19.4 bits (38), Expect = 6.5
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +3

Query: 60  LHSPKGVSKEKRATNSF 110
           +  PKG S  KRA  ++
Sbjct: 96  MERPKGASNGKRARTAY 112


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 19.4 bits (38), Expect = 6.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 70  RKVFRRKKGLQTHS 111
           R  F RK+G QT++
Sbjct: 239 RSQFERKRGRQTYT 252


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 19.0 bits (37), Expect = 8.6
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 53   CDTSFTERCFEGKKGYK 103
            CD   + +C E K G+K
Sbjct: 1144 CDWPKSAKCEEKKPGHK 1160


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 19.0 bits (37), Expect = 8.6
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -3

Query: 255  FFLLEATFIL*IYTL 211
            FF++ A F+L ++ L
Sbjct: 1272 FFMMNALFVLIVFLL 1286


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 19.0 bits (37), Expect = 8.6
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -3

Query: 255  FFLLEATFIL*IYTL 211
            FF++ A F+L ++ L
Sbjct: 1272 FFMMNALFVLIVFLL 1286


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 19.0 bits (37), Expect = 8.6
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 150 FYNLYKVIHNI 182
           FY +YK  +NI
Sbjct: 39  FYKIYKYTYNI 49


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 19.0 bits (37), Expect = 8.6
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = +3

Query: 126 YKACNVTLFYNLYKVI 173
           Y  CN T+F   + V+
Sbjct: 154 YYVCNTTIFLIFHSVL 169


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 19.0 bits (37), Expect = 8.6
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = +1

Query: 43  FIQLRYFIHRKVFRRKKGLQTHSFSIFFT 129
           ++   YF+ R    +   + +H   IFFT
Sbjct: 146 YLLFDYFVQRNQEYKYYQILSHLSGIFFT 174


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,641
Number of Sequences: 336
Number of extensions: 1138
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  4058134
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)