Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11h11
         (257 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457150-1|CAG33431.1|  245|Homo sapiens RNF138 protein.               27   8.2  
BT006878-1|AAP35524.1|  245|Homo sapiens STRIN protein protein.        27   8.2  
BC018107-1|AAH18107.1|  245|Homo sapiens ring finger protein 138...    27   8.2  
AL133557-1|CAB63712.1|  183|Homo sapiens hypothetical protein pr...    27   8.2  

>CR457150-1|CAG33431.1|  245|Homo sapiens RNF138 protein.
          Length = 245

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -3

Query: 156 YKIMLHYKPCKKYRKGMSL*PFFPSKHLSVNEV 58
           Y++  HYK CKKY+    +    P+  +S + V
Sbjct: 96  YRMRHHYKSCKKYQDEYGVSSIIPNFQISQDSV 128


>BT006878-1|AAP35524.1|  245|Homo sapiens STRIN protein protein.
          Length = 245

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -3

Query: 156 YKIMLHYKPCKKYRKGMSL*PFFPSKHLSVNEV 58
           Y++  HYK CKKY+    +    P+  +S + V
Sbjct: 96  YRMRHHYKSCKKYQDEYGVSSIIPNFQISQDSV 128


>BC018107-1|AAH18107.1|  245|Homo sapiens ring finger protein 138
           protein.
          Length = 245

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -3

Query: 156 YKIMLHYKPCKKYRKGMSL*PFFPSKHLSVNEV 58
           Y++  HYK CKKY+    +    P+  +S + V
Sbjct: 96  YRMRHHYKSCKKYQDEYGVSSIIPNFQISQDSV 128


>AL133557-1|CAB63712.1|  183|Homo sapiens hypothetical protein
           protein.
          Length = 183

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -3

Query: 156 YKIMLHYKPCKKYRKGMSL*PFFPSKHLSVNEV 58
           Y++  HYK CKKY+    +    P+  +S + V
Sbjct: 34  YRMRHHYKSCKKYQDEYGVSSIIPNFQISQDSV 66


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,668,606
Number of Sequences: 237096
Number of extensions: 520247
Number of successful extensions: 935
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 935
length of database: 76,859,062
effective HSP length: 63
effective length of database: 61,922,014
effective search space used: 1362284308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)