Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11h11
         (257 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    23   0.46 
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    23   0.46 
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    23   0.46 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   0.46 
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    21   3.2  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    20   5.6  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          20   5.6  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      20   5.6  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    20   5.6  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    20   5.6  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    20   5.6  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    19   7.4  
AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding pr...    19   7.4  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    19   9.8  

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 23.4 bits (48), Expect = 0.46
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 62  KYRSCMKNCAVNSSSYFL 9
           K+  C+KN A   SSYF+
Sbjct: 94  KFYDCLKNSADTISSYFV 111


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 23.4 bits (48), Expect = 0.46
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 62  KYRSCMKNCAVNSSSYFL 9
           K+  C+KN A   SSYF+
Sbjct: 99  KFYDCLKNSADTISSYFV 116


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 23.4 bits (48), Expect = 0.46
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 62  KYRSCMKNCAVNSSSYFL 9
           K+  C+KN A   SSYF+
Sbjct: 99  KFYDCLKNSADTISSYFV 116


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.4 bits (48), Expect = 0.46
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 101 CSPFFLRNTFR*MKYRSCMKN 39
           C  FF R+  + ++YR C KN
Sbjct: 87  CKGFFRRSIQQKIQYRPCTKN 107


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced
          protein 75 protein.
          Length = 87

 Score = 20.6 bits (41), Expect = 3.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 92 FFLRNTFR*MKYRSCMKN 39
          FF R+  + ++YR C KN
Sbjct: 41 FFRRSIQQKIQYRPCTKN 58


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 19.8 bits (39), Expect = 5.6
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 147 LFYNLYKVIHNISETF 194
           +FY LYK + N+ + +
Sbjct: 433 VFYQLYKKVMNLYQQY 448


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 19.8 bits (39), Expect = 5.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 43 KIVLLTALATSC 8
          K+VLL ALA  C
Sbjct: 4  KVVLLVALAAIC 15


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 19.8 bits (39), Expect = 5.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 43 KIVLLTALATSC 8
          K+VLL ALA  C
Sbjct: 4  KVVLLVALAAIC 15


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 19.8 bits (39), Expect = 5.6
 Identities = 8/32 (25%), Positives = 21/32 (65%)
 Frame = -2

Query: 172 ITLYKL*NNVTLQAL*KI*KRNEFVALFSFET 77
           I+ +++ NNVT+Q L K+ + +++ ++    +
Sbjct: 62  ISSHQIANNVTMQLLPKLMEFDDWTSVMELHS 93


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 19.8 bits (39), Expect = 5.6
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +3

Query: 36  TIFHTTAILHSPKGVSKEKRATNSFL 113
           T FH T I++       EKR  N  L
Sbjct: 38  TYFHHTYIIYESLCGRHEKRLLNELL 63


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 19.8 bits (39), Expect = 5.6
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +3

Query: 36  TIFHTTAILHSPKGVSKEKRATNSFL 113
           T FH T I++       EKR  N  L
Sbjct: 38  TYFHHTYIIYESLCGRHEKRLLNELL 63


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 19.4 bits (38), Expect = 7.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 70  RKVFRRKKGLQTHS 111
           R  F RK+G QT++
Sbjct: 265 RSQFERKRGRQTYT 278


>AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding
           protein protein.
          Length = 132

 Score = 19.4 bits (38), Expect = 7.4
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2

Query: 190 VSDILCITLYKL 155
           V DI+C  +YK+
Sbjct: 119 VDDIICTRVYKI 130


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 19.0 bits (37), Expect = 9.8
 Identities = 5/6 (83%), Positives = 6/6 (100%)
 Frame = -1

Query: 254 FFYWRL 237
           FFYWR+
Sbjct: 265 FFYWRI 270


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,882
Number of Sequences: 438
Number of extensions: 1103
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  4636803
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)