Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11h11
(257 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g55420.1 68414.m06339 DC1 domain-containing protein contains ... 29 0.56
At1g55380.1 68414.m06334 DC1 domain-containing protein contains ... 28 0.98
At2g04500.1 68415.m00455 DC1 domain-containing protein contains ... 27 1.7
At5g44770.1 68418.m05487 DC1 domain-containing protein contains ... 26 4.0
At5g41200.1 68418.m05007 MADS-box family protein contains simila... 25 9.1
At5g02140.1 68418.m00135 thaumatin-like protein, putative simila... 25 9.1
At3g50010.1 68416.m05468 DC1 domain-containing protein contains ... 25 9.1
At3g44570.1 68416.m04790 hypothetical protein 25 9.1
At3g25020.1 68416.m03127 disease resistance family protein conta... 25 9.1
At2g28630.1 68415.m03481 beta-ketoacyl-CoA synthase family protein 25 9.1
At1g71970.1 68414.m08319 expressed protein 25 9.1
>At1g55420.1 68414.m06339 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 725
Score = 28.7 bits (61), Expect = 0.56
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
Frame = +3
Query: 120 IFYKACN---VTLFYNLYKVIHNI--SETFCYDCKLKC 218
I+ K C+ V LFY ++ N S FCY C+L+C
Sbjct: 619 IYLKPCHIFKVGLFYKEVEIARNDGNSRLFCYICRLRC 656
>At1g55380.1 68414.m06334 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 661
Score = 27.9 bits (59), Expect = 0.98
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
Frame = +3
Query: 120 IFYKACN---VTLFYNLYKVIHNI--SETFCYDCKLKC 218
I+ K C+ V L+Y ++ N S FCY C+L+C
Sbjct: 579 IYLKPCHIFKVGLYYKEVEIARNDGNSRLFCYTCELRC 616
>At2g04500.1 68415.m00455 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 495
Score = 27.1 bits (57), Expect = 1.7
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = +3
Query: 174 HNISETFCYDCKLKCKF 224
+ ++ FC+ C+L+CKF
Sbjct: 444 NGVTRPFCFHCELRCKF 460
>At5g44770.1 68418.m05487 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 541
Score = 25.8 bits (54), Expect = 4.0
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +3
Query: 141 VTLFYNLYKVIHNISET--FCYDCKLKCKF 224
V L Y +V+ N T FC CK++CKF
Sbjct: 487 VGLVYPGLEVLPNNGATRPFCNSCKVRCKF 516
>At5g41200.1 68418.m05007 MADS-box family protein contains
similarity to hypothetical proteins of [Arabidopsis
thaliana]
Length = 330
Score = 24.6 bits (51), Expect = 9.1
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 46 IQLRYFIHRKVFRRKKGLQTHSF 114
I LRY + + RRKK + H F
Sbjct: 67 IALRYSLLNEALRRKKSVNLHGF 89
>At5g02140.1 68418.m00135 thaumatin-like protein, putative similar
to SP|P50699 Thaumatin-like protein precursor
{Arabidopsis thaliana}; contains Pfam profile PF00314:
Thaumatin family
Length = 294
Score = 24.6 bits (51), Expect = 9.1
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 129 KACNVTLFYNLYKVIHNISETFCYD 203
+AC TLF NL+K I + ++ +D
Sbjct: 198 QACKPTLFANLFKAICPKAYSYAFD 222
>At3g50010.1 68416.m05468 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 769
Score = 24.6 bits (51), Expect = 9.1
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +3
Query: 174 HNISETFCYDCKLKC 218
H++S FC+ CK +C
Sbjct: 723 HHMSRPFCFICKKRC 737
>At3g44570.1 68416.m04790 hypothetical protein
Length = 239
Score = 24.6 bits (51), Expect = 9.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 193 NVSDILCITLYKL*NNVTLQA 131
NV+ +LC TL K+ NNV A
Sbjct: 186 NVAAVLCDTLVKMKNNVPTSA 206
>At3g25020.1 68416.m03127 disease resistance family protein contains
leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Hcr2-0B [Lycopersicon
esculentum] gi|3894387|gb|AAC78593
Length = 890
Score = 24.6 bits (51), Expect = 9.1
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = +3
Query: 135 CNVTLFYNLYKVIHNISETFCYDCKLKCKFIE 230
C+++ F N++K +HN+ + ++ KF E
Sbjct: 400 CDISEFPNVFKTLHNLEYIALSNNRISGKFPE 431
>At2g28630.1 68415.m03481 beta-ketoacyl-CoA synthase family protein
Length = 476
Score = 24.6 bits (51), Expect = 9.1
Identities = 9/36 (25%), Positives = 19/36 (52%)
Frame = +3
Query: 111 LFYIFYKACNVTLFYNLYKVIHNISETFCYDCKLKC 218
L ++F+ LF+ ++K+I + + CY +C
Sbjct: 3 LLFLFFSLLLSYLFFKIWKLIDSKQDKDCYILDYQC 38
>At1g71970.1 68414.m08319 expressed protein
Length = 225
Score = 24.6 bits (51), Expect = 9.1
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 59 YRSCMKNCAVNSSSYFLP 6
Y SC + CAV S +LP
Sbjct: 191 YGSCRRTCAVTESIVYLP 208
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,786,196
Number of Sequences: 28952
Number of extensions: 77700
Number of successful extensions: 188
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 188
length of database: 12,070,560
effective HSP length: 64
effective length of database: 10,217,632
effective search space used: 214570272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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