Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11h10
         (715 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    30   0.083
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    29   0.14 
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    24   4.1  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    24   4.1  
AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    23   9.5  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 29.9 bits (64), Expect = 0.083
 Identities = 20/65 (30%), Positives = 26/65 (40%)
 Frame = +3

Query: 120  KMRKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTGRKRVSKAPVNNT 299
            K RKRK  K   +   G G     E+ +        D+DS E      RKR  K      
Sbjct: 935  KERKRKGEKKPRKSQGGGGSRKRKEKARRGSGG---DSDSEEEEGEGSRKRKKKGASGGQ 991

Query: 300  KKKRK 314
            KK++K
Sbjct: 992  KKRQK 996



 Score = 24.2 bits (50), Expect = 4.1
 Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +3

Query: 126  RKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPA-SRTGRKRVSKAPVNNTK 302
            ++++ +  +EEDSDGS + +       SG      + S   A SR G    S++   +  
Sbjct: 1046 KRKRRIASDEEDSDGSQRRSRSRSRSGSGSRSRSRSGSGSRAGSRAGSGSRSRSRSRSRS 1105

Query: 303  KKR 311
            + R
Sbjct: 1106 RSR 1108


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 29.1 bits (62), Expect = 0.14
 Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +3

Query: 156 EDSDGSGQGAEPEEFQDSGEDW-TPDADSNEPASRTGR 266
           +D+DG+G+G E   ++D  E + TP+       +R GR
Sbjct: 699 KDADGNGEGTEESTYRDKDESFDTPEEQVLHFLARVGR 736


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +3

Query: 132 RKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRT 260
           + +L LN+E S G  +  E  +F+D   D+    +  EPA +T
Sbjct: 73  KSTLVLNDEPSQGDSKDNEIYDFED--PDYIVQ-EEQEPAKKT 112


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 316 FLRFFLVLFTGAFDTRFLPV 257
           +L  FL +F   FDT F P+
Sbjct: 428 YLEAFLSVFQNCFDTGFFPI 447


>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +2

Query: 581 IITEIYPNGIKWKSFTQMYMCVFWV 655
           I+T  YP   K     ++Y+ ++W+
Sbjct: 318 ILTSYYPELTKKPYIQEVYLAIYWL 342


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 715,930
Number of Sequences: 2352
Number of extensions: 13598
Number of successful extensions: 46
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)