Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11h10
(715 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g19080.1 68416.m02423 SWIB complex BAF60b domain-containing p... 32 0.33
At5g40340.1 68418.m04894 PWWP domain-containing protein KED, Nic... 31 1.0
At4g11890.3 68417.m01892 protein kinase family protein contains ... 31 1.0
At4g11890.2 68417.m01891 protein kinase family protein contains ... 31 1.0
At4g11890.1 68417.m01890 protein kinase family protein contains ... 31 1.0
At4g31880.1 68417.m04531 expressed protein 29 2.3
At2g43180.4 68415.m05365 expressed protein 29 2.3
At2g43180.3 68415.m05363 expressed protein 29 2.3
At2g43180.2 68415.m05364 expressed protein 29 2.3
At2g43180.1 68415.m05362 expressed protein 29 2.3
At1g68790.1 68414.m07863 expressed protein 29 2.3
At5g09590.1 68418.m01110 heat shock protein 70 / HSP70 (HSC70-5)... 29 3.1
At2g22520.1 68415.m02671 hypothetical protein and grail 29 3.1
At1g80930.1 68414.m09495 MIF4G domain-containing protein / MA3 d... 29 3.1
At4g01260.1 68417.m00166 hypothetical protein low similarity to ... 29 4.0
At3g20760.1 68416.m02626 hypothetical protein 29 4.0
At5g49400.1 68418.m06113 zinc knuckle (CCHC-type) family protein... 28 5.3
At4g36930.1 68417.m05235 basic helix-loop-helix (bHLH) protein S... 28 5.3
At4g15980.1 68417.m02426 pectinesterase family protein contains ... 28 5.3
At5g14280.1 68418.m01670 DNA-binding storekeeper protein-related... 28 7.1
At5g04110.1 68418.m00397 DNA topoisomerase II family protein sii... 28 7.1
At3g57930.1 68416.m06457 expressed protein 28 7.1
At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains... 28 7.1
At5g53800.1 68418.m06685 expressed protein 27 9.3
At5g44345.1 68418.m05430 F-box family protein-related contains T... 27 9.3
At3g59020.1 68416.m06578 importin beta-2 subunit family protein ... 27 9.3
At3g16840.1 68416.m02150 DEAD/DEAH box helicase, putative (RH13)... 27 9.3
At1g77680.1 68414.m09044 ribonuclease II family protein weak sim... 27 9.3
At1g28310.1 68414.m03474 Dof-type zinc finger domain-containing ... 27 9.3
>At3g19080.1 68416.m02423 SWIB complex BAF60b domain-containing
protein contains Pfam profile PF02201: BAF60b domain of
the SWIB complex
Length = 462
Score = 32.3 bits (70), Expect = 0.33
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 147 LNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTGRKRVSKAPVNNTKK-KRK 314
+ EED D + +G + + Q + + +S E R+ RKR K P + +K KRK
Sbjct: 203 VKEEDEDEASEGTDKKGEQSEEVEENKEEESEEQEVRSLRKRKRKKPAKSVEKPKRK 259
>At5g40340.1 68418.m04894 PWWP domain-containing protein KED,
Nicotiana tabacum, EMBL:AB009883
Length = 1008
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +3
Query: 117 KKMRKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTGRKRVSKAPVNN 296
K RK+K + +++ D DGSG E EE + S D + DS AS + R + V
Sbjct: 462 KTSRKKKKMDVDDGDDDGSGDKEESEEKEIS--DLEINIDSTSLASLRKKVRFDDSVVER 519
Query: 297 T 299
+
Sbjct: 520 S 520
>At4g11890.3 68417.m01892 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 354
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +3
Query: 465 PKHFHSGNFVLLKSDVKWDGDTVISKLDELNLWKIDGKALLQ 590
P++ SG V +KSDV G T+++ + W +DG +L++
Sbjct: 211 PEYIRSGR-VSVKSDVYAFGVTILTIISRRKAWSVDGDSLIK 251
>At4g11890.2 68417.m01891 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 352
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +3
Query: 465 PKHFHSGNFVLLKSDVKWDGDTVISKLDELNLWKIDGKALLQ 590
P++ SG V +KSDV G T+++ + W +DG +L++
Sbjct: 209 PEYIRSGR-VSVKSDVYAFGVTILTIISRRKAWSVDGDSLIK 249
>At4g11890.1 68417.m01890 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 351
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +3
Query: 465 PKHFHSGNFVLLKSDVKWDGDTVISKLDELNLWKIDGKALLQ 590
P++ SG V +KSDV G T+++ + W +DG +L++
Sbjct: 208 PEYIRSGR-VSVKSDVYAFGVTILTIISRRKAWSVDGDSLIK 248
>At4g31880.1 68417.m04531 expressed protein
Length = 873
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Frame = +3
Query: 153 EEDSDGSGQGAEPEEFQ-DSGEDWTPDADSNEPASRT---GRKRVSKAPVNNTKKKR 311
E+ G G+ + E SG++ P S + AS++ ++ V ++P +NTK+KR
Sbjct: 540 EKKKPGRGKAIDEESLHTSSGDNEKPAVSSGKLASKSKKEAKQTVEESPNSNTKRKR 596
>At2g43180.4 68415.m05365 expressed protein
Length = 466
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -1
Query: 598 INFCNNALPSIFHKFSSSSFDITVSPSHFT 509
++FC+++ P I HK S SSF + + S FT
Sbjct: 4 LSFCSSSPPRILHKQSKSSFFPSSASSSFT 33
>At2g43180.3 68415.m05363 expressed protein
Length = 478
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -1
Query: 598 INFCNNALPSIFHKFSSSSFDITVSPSHFT 509
++FC+++ P I HK S SSF + + S FT
Sbjct: 4 LSFCSSSPPRILHKQSKSSFFPSSASSSFT 33
>At2g43180.2 68415.m05364 expressed protein
Length = 451
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -1
Query: 598 INFCNNALPSIFHKFSSSSFDITVSPSHFT 509
++FC+++ P I HK S SSF + + S FT
Sbjct: 4 LSFCSSSPPRILHKQSKSSFFPSSASSSFT 33
>At2g43180.1 68415.m05362 expressed protein
Length = 479
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -1
Query: 598 INFCNNALPSIFHKFSSSSFDITVSPSHFT 509
++FC+++ P I HK S SSF + + S FT
Sbjct: 4 LSFCSSSPPRILHKQSKSSFFPSSASSSFT 33
>At1g68790.1 68414.m07863 expressed protein
Length = 1085
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 492 VLLKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIPME 608
VLL+ D W + LDE +L + D AL++K + +E
Sbjct: 33 VLLREDDDWQKFKEVGLLDEASLERKDRDALIEKILKLE 71
>At5g09590.1 68418.m01110 heat shock protein 70 / HSP70 (HSC70-5)
identical to heat shock protein 70 [Arabidopsis
thaliana] GI:6746590
Length = 682
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 144 KLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNE 245
K+ E S GSG G+ P + G D P+A+ E
Sbjct: 646 KIGEHMSGGSGGGSAPGGGSEGGSDQAPEAEYEE 679
>At2g22520.1 68415.m02671 hypothetical protein and grail
Length = 185
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = -2
Query: 594 ISVIMLCHQFSTSSVHQVLILQYLHPILHLISARQNFLNGNALVHLSIDLNQICF 430
+S+IML H++ VH V L H I +R + L+ + VHL + L + C+
Sbjct: 1 MSIIMLTHRYLVREVHAVPFLT-KHGIGFYFFSRNSVLHVHQKVHLFV-LKRFCY 53
>At1g80930.1 68414.m09495 MIF4G domain-containing protein / MA3
domain-containing protein similar to SP|Q9P6R9 Cell cycle
control protein cwf22 {Schizosaccharomyces pombe};
contains Pfam profiles PF02854: MIF4G domain, PF02847:
MA3 domain
Length = 900
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/63 (20%), Positives = 30/63 (47%)
Frame = +3
Query: 84 SLSYFFRTIPIKKMRKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTG 263
+L + + +P M+++K + +E S ++ E +SG + +D ++ R
Sbjct: 837 NLREYLKNMPSLIMQRQKQVAESESGSSSGSDSSDSESESESGSSSSSSSDESDREKRKR 896
Query: 264 RKR 272
R+R
Sbjct: 897 RRR 899
>At4g01260.1 68417.m00166 hypothetical protein low similarity to
storekeeper protein [Solanum tuberosum] GI:14268476;
contains Pfam profile PF04504: Protein of unknown
function, DUF573
Length = 325
Score = 28.7 bits (61), Expect = 4.0
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +3
Query: 114 IKKMRKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEP--ASRTGRKRVSKAP 287
+KK+ EE+S SG+ A E DS D S +P S+ + + P
Sbjct: 6 LKKIENPVVSSSEEEESASSGESATSGEESDSSADSPVKESSKKPVVVSKPSGSKTTTKP 65
Query: 288 VNNTKKKR 311
++T KR
Sbjct: 66 ESSTAAKR 73
>At3g20760.1 68416.m02626 hypothetical protein
Length = 373
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/66 (24%), Positives = 30/66 (45%)
Frame = +3
Query: 120 KMRKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTGRKRVSKAPVNNT 299
+M++RKS ++ G G +PEE D+ + D D+N ++ + + N
Sbjct: 197 EMKQRKS-RVGNRKRTKPGAGVKPEEVDDTEAEKKSDTDNNMAVMFNILRKNKRVKIENL 255
Query: 300 KKKRKN 317
RK+
Sbjct: 256 VLNRKS 261
>At5g49400.1 68418.m06113 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 275
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +3
Query: 120 KMRKRKSLKLNEEDSDGSGQGAEPEEFQDSGE---DWTPDADSNEPASRTGRKRVSKAPV 290
K KRK ++ +SD E + SGE +++ +DS + R + + SK
Sbjct: 169 KKSKRKHRSKSDSESDSEASVFETDSDGSSGESSSEYSSSSDSEDERRRRRKAKKSKKKQ 228
Query: 291 NNTKKKRK 314
K++R+
Sbjct: 229 KQRKERRR 236
>At4g36930.1 68417.m05235 basic helix-loop-helix (bHLH) protein
SPATULA (SPT) identical to SPATULA (SPT) GI:11245493
from [Arabidopsis thaliana]
Length = 373
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +3
Query: 195 EFQDSGEDWTPDADSNE--PASRTGRKRVSKAPVNNTKKKRK 314
E ++ GE +A S++ P+SR+ KR A V+N +KR+
Sbjct: 168 ESEEGGEAVVDEAPSSKSGPSSRSSSKRCRAAEVHNLSEKRR 209
>At4g15980.1 68417.m02426 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 701
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/56 (25%), Positives = 23/56 (41%)
Frame = +3
Query: 150 NEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTGRKRVSKAPVNNTKKKRKN 317
+ ++S GS Q + P E T D+ N+P + + S + N KN
Sbjct: 228 SRDESVGSSQDSPPNEDSSDDSPSTVDSSENQPVDSSSENQSSDSSNNRPLDSSKN 283
>At5g14280.1 68418.m01670 DNA-binding storekeeper protein-related
contains similarity to storekeeper protein [Solanum
tuberosum] gi|14268476|emb|CAC39398; contains PF04504:
Protein of unknown function, DUF573
Length = 572
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 228 DADSNEPASRTGRKRVSK-APVNNTKKKRK 314
D+D N P RT ++ S+ A TKKK+K
Sbjct: 18 DSDDNPPQKRTSKRTASETATEEETKKKKK 47
>At5g04110.1 68418.m00397 DNA topoisomerase II family protein
siimilar to DNA topoisomerase II subunit B [Thermotoga
maritima] GI:1622792; contains Pfam profiles PF00204:
DNA topoisomerase II (N-terminal region), PF00249:
Myb-like DNA-binding domain
Length = 546
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 87 LSYFFRTIPIKKMRKRKSLKLNEEDSD 167
LSY++ IK+MR KS N DSD
Sbjct: 510 LSYYYNVFLIKRMRLLKSSAANNIDSD 536
>At3g57930.1 68416.m06457 expressed protein
Length = 141
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +3
Query: 117 KKMRKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTGRKRVSKAPVNN 296
K+ R +K +K EE+ + + + EE D +D S E + GRKR K PV +
Sbjct: 32 KRGRPQKPVKDEEEEEEELVKKTDEEE--DKDDDTNGSVTSKENVTENGRKR--KKPVES 87
>At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains
ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
Length = 1340
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/57 (28%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = +3
Query: 150 NEEDSDGSGQGAE-PEEFQDSGEDWTPDADSNEPASRTGRKRVSKAPVNNTKKKRKN 317
+EED DG E PEE + + P+ D E + P +KK +N
Sbjct: 1156 DEEDDDGDDDPEEDPEEDPEEDPEEDPEEDPEECEEMDVANTEQEEPAEEPQKKEEN 1212
>At5g53800.1 68418.m06685 expressed protein
Length = 351
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/66 (22%), Positives = 29/66 (43%)
Frame = +3
Query: 117 KKMRKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTGRKRVSKAPVNN 296
K+ RKS + D S ++ E +S + +++S + R RKR +
Sbjct: 86 KRKSDRKSSRSRRRRRDYSSSSSDSESESESEYSDSEESESEDERRRRKRKRKEREEEEK 145
Query: 297 TKKKRK 314
+K+R+
Sbjct: 146 ERKRRR 151
>At5g44345.1 68418.m05430 F-box family protein-related contains
TIGRFAM TIGR01640 : F-box protein interaction domain
Length = 181
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +3
Query: 84 SLSYFFRTIPIKKMRKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDW 221
S S F I +RKR+ + L E +GSG G +P E Q W
Sbjct: 13 SSSRFGSPAAIVCLRKRQEVALFLEGKEGSGAGYDPVEKQYKVLTW 58
>At3g59020.1 68416.m06578 importin beta-2 subunit family protein
similar to D-Importin 7/RanBP7 [Drosophila melanogaster]
GI:7542336; contains Pfam profile PF03810: Importin-beta
N-terminal domain
Length = 1112
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +3
Query: 135 KSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTG 263
++ K EE+ D G + +EFQ ED D D P G
Sbjct: 967 EAAKAEEEEEDEDGDDDDMDEFQTDDED--EDGDDENPDETDG 1007
>At3g16840.1 68416.m02150 DEAD/DEAH box helicase, putative (RH13)
similar to RNA helicase GB:CAA09204 from [Arabidopsis
thaliana]; identical to cDNA DEAD box RNA helicase, RH13
GI:3776002
Length = 832
Score = 27.5 bits (58), Expect = 9.3
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +3
Query: 105 TIPIKKMRKRKSLKLNEEDSDGSGQGAEPEEFQDSGE--DWTPDADSNEPASRTGRKRVS 278
TI + +++S + +++ ++ + E EE ++ GE D D D E T +K+
Sbjct: 81 TIESEITERKQSPEDDDDTNETVDEMIEGEEAEEDGEGRDDEDDEDDEE----TRKKKEK 136
Query: 279 KAPVNNTKKKRK 314
KA N KKK K
Sbjct: 137 KAKRNKEKKKEK 148
>At1g77680.1 68414.m09044 ribonuclease II family protein weak
similarity to SP|P37202 Mitotic control protein dis3
{Schizosaccharomyces pombe}; contains Pfam profile
PF00773: RNB-like protein
Length = 1055
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +3
Query: 519 DGDTVISKLDELNLW 563
+GDTV+ KLD L+LW
Sbjct: 205 EGDTVVIKLDPLSLW 219
>At1g28310.1 68414.m03474 Dof-type zinc finger domain-containing
protein
Length = 311
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = -1
Query: 589 CNNALPSIFHKFSSSSFDITVSPSHFTSDFSKTKFPEWKCFG 464
CNN LP I +FS SS T S S S+F + F G
Sbjct: 132 CNNNLPMIPSRFSDSS--KTCSSSGLESEFLSSGFSSLSALG 171
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,129,187
Number of Sequences: 28952
Number of extensions: 309758
Number of successful extensions: 1345
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1344
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1545769616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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