Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11h05
         (591 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    25   0.63 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   1.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.6  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   3.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   3.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   3.4  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   3.4  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   7.8  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   7.8  

>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 24.6 bits (51), Expect = 0.63
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -2

Query: 584 RLHQISAMECTPQFTHNEELVSPHGAVVNLVLDRFSY 474
           R H  +  +     T+N  LV+P+G  V  ++D  SY
Sbjct: 497 RFHIYTPEDLFAPNTYNRHLVAPNGDHVISLIDEISY 533


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -3

Query: 298 FSLASFSSATLVLYCSSVRSLVSRFCL 218
           ++L+  S   L+ +C+ V  L  +FC+
Sbjct: 171 YTLSKMSQVMLIQFCAFVVVLKQKFCV 197


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -3

Query: 352  GMNVPSRSFKVATSFTLPFSLASFSSATLVLYCSSV 245
            G   PS+   V+ S ++P  +ASF       Y   V
Sbjct: 1289 GEGQPSKKVTVSPSASVPAKIASFDDTFTTTYKEDV 1324


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 278 FCDPGLILFICEVSRVSFLF 219
           FC   L++F C+   V FLF
Sbjct: 68  FCT-ALVIFYCQEGSVDFLF 86


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 278 FCDPGLILFICEVSRVSFLF 219
           FC   L++F C+   V FLF
Sbjct: 301 FCT-ALVIFYCQEGSVDFLF 319


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 278 FCDPGLILFICEVSRVSFLF 219
           FC   L++F C+   V FLF
Sbjct: 301 FCT-ALVIFYCQEGSVDFLF 319


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = +1

Query: 187 PEAGVGVWTTANKNETRETSQMNNIRPGSQN*TKLS*KGA 306
           PE+ V VW    + + R+  + +N +   +  +KL  K A
Sbjct: 109 PESRVQVWFKNRRAKCRQQQKQHNQQQSVEKSSKLKNKSA 148


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -3

Query: 295 SLASFSSATLVLYCSSVRSLVSRFCLPLSKRR 200
           SL    + TL++ C  VRS  S+      K R
Sbjct: 244 SLIFLFNCTLIIMCDCVRSEASKVVKNAQKLR 275


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -3

Query: 301 PFSLASFSSATLVLYCSSVRSLVSRFCLPLS 209
           P ++   ++  L +    VRS+ +  CLPLS
Sbjct: 196 PSAICESAAQLLFMNVQWVRSIPAFTCLPLS 226


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,932
Number of Sequences: 336
Number of extensions: 2700
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)