Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11h05
(591 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyc... 62 4e-11
SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomy... 61 1e-10
SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism... 59 4e-10
SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyc... 45 1e-05
SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde reduc... 39 6e-04
SPAC1565.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 0.38
SPCC965.06 |||potassium channel subunit |Schizosaccharomyces pom... 28 0.89
SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual 28 1.2
SPAC186.01 |||DIPSY family|Schizosaccharomyces pombe|chr 1|||Manual 27 2.7
SPBP22H7.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 26 3.6
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 26 4.7
SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pomb... 26 4.7
SPAC589.09 |||sec14 cytosolic factor family|Schizosaccharomyces ... 25 6.2
SPBPB7E8.01 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 8.3
SPCC1620.11 |mug87||nucleoporin Nic96 homolog|Schizosaccharomyce... 25 8.3
>SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 62.5 bits (145), Expect = 4e-11
Identities = 32/82 (39%), Positives = 46/82 (56%)
Frame = +3
Query: 303 SVKEVATLKLRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGK 482
S E T+ L +G +P I G +L +V A+D GYR IDTA +YGNE + GK
Sbjct: 4 SQTESTTVTLTNGMVIPRIGFGAFMLKYNECYGLVTQALDSGYRHIDTAAVYGNEDICGK 63
Query: 483 AIKNKIDDGTVRRDELFIMGKL 548
AI + + V+R ++F+ KL
Sbjct: 64 AIVDWCEKNNVKRTDIFLTSKL 85
>SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 321
Score = 61.3 bits (142), Expect = 1e-10
Identities = 34/86 (39%), Positives = 46/86 (53%)
Frame = +3
Query: 330 LRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDG 509
L DG+ +P + LGT P V+TA+ GYR ID A IYGNE +G IK + G
Sbjct: 18 LADGSKIPGLGLGTWRSEPNQTKNAVKTALQYGYRHIDAAAIYGNEDEVGDGIK---ESG 74
Query: 510 TVRRDELFIMGKLWSTFHRTDLVETA 587
R+D +++ KLW H + V A
Sbjct: 75 VPRKD-IWVTSKLWCNAHAPEAVPKA 99
>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 59.3 bits (137), Expect = 4e-10
Identities = 36/90 (40%), Positives = 47/90 (52%)
Frame = +3
Query: 318 ATLKLRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNK 497
A L +G +P I LGT V A+ GYR IDTA+IYGNEK IG+ I+
Sbjct: 13 AYFTLPNGDKIPSIGLGTWRSGKDETKNAVCAALKAGYRHIDTAHIYGNEKEIGEGIR-- 70
Query: 498 IDDGTVRRDELFIMGKLWSTFHRTDLVETA 587
+ V R ++++ KLW HR LV A
Sbjct: 71 --ESGVPRTDIWVTSKLWCNAHRAGLVPLA 98
>SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 275
Score = 44.8 bits (101), Expect = 1e-05
Identities = 23/75 (30%), Positives = 41/75 (54%)
Frame = +3
Query: 324 LKLRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKID 503
+KL +G P A G+ ++ + V A+ GYR ID+A +Y NE G+AI ++
Sbjct: 6 VKLNNGLKCPQFAYGSYMVNRTKCFDSVYAALQCGYRHIDSAQMYHNEADCGRAILKFME 65
Query: 504 DGTVRRDELFIMGKL 548
+ +R++++ KL
Sbjct: 66 ETGTKREDIWFTSKL 80
>SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde
reductase AKR3C2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 284
Score = 38.7 bits (86), Expect = 6e-04
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = +3
Query: 348 MPVIALGTALLPP------RLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDG 509
+P +GTAL R + V+ A+ G+ ID A +YGNE+ +G A+K +
Sbjct: 12 VPAYGVGTALFKKEKGEINRTIVDSVKNALAAGFIHIDCAEVYGNEEEVGVALK----EA 67
Query: 510 TVRRDELFIMGKLWSTFHRTDLVETA 587
V R +LFI K+ H D + A
Sbjct: 68 NVPRSKLFITSKV---MHNVDNIPEA 90
>SPAC1565.05 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 773
Score = 29.5 bits (63), Expect = 0.38
Identities = 20/78 (25%), Positives = 37/78 (47%)
Frame = +3
Query: 297 KGSVKEVATLKLRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLI 476
K S+K++ G ++ G A++P L +++ A +G R + G +LI
Sbjct: 366 KSSLKKMNQNSQLTGYIAVLLKKGLAIVPYTLPIKML-LADAVGKRTSKIGKLRGTNELI 424
Query: 477 GKAIKNKIDDGTVRRDEL 530
G+ + K +G RD+L
Sbjct: 425 GEGVLTKSKNGPSMRDQL 442
>SPCC965.06 |||potassium channel subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 344
Score = 28.3 bits (60), Expect = 0.89
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
Frame = +3
Query: 405 VETAIDMGYRAIDTAYIYGN---EKLIGKAIK 491
++ A D+G DTA IY N E ++GKAIK
Sbjct: 50 LKQAWDLGINTFDTAEIYSNGNSETVMGKAIK 81
>SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual
Length = 815
Score = 27.9 bits (59), Expect = 1.2
Identities = 17/59 (28%), Positives = 33/59 (55%)
Frame = -3
Query: 292 LASFSSATLVLYCSSVRSLVSRFCLPLSKRRRPLPGDSSILTEVIFLNTKKHNMNQIIF 116
++SFS+ +LY + +S+VS +PL + L S+LT +I++ K+ Q ++
Sbjct: 49 ISSFSTHLNILYFNLSKSMVSFAQVPLEEYLNLL--GHSLLTSIIYVMLKRRFYEQSVY 105
>SPAC186.01 |||DIPSY family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 26.6 bits (56), Expect = 2.7
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -3
Query: 421 SIAVSTISVANRGGSKAVPKAMTGMNVPSRSFKVA--TSFTLPFSLASFSS 275
SI STI+ GS+ +TG N P + +V T+ T +L S SS
Sbjct: 99 SIITSTITTTITSGSQLYTTTITGQNTPVDTVEVVIPTAGTFTTTLTSGSS 149
>SPBP22H7.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 255
Score = 26.2 bits (55), Expect = 3.6
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 343 VPSRSFKVATSFTLPFSLASFSSATLV 263
+PS+ F++ T F PF+ FS + +V
Sbjct: 177 LPSQRFEIVTGFLSPFNKLYFSKSLIV 203
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.8 bits (54), Expect = 4.7
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +3
Query: 198 RRRLDNGKQKRDTRDLTDEQYKTRVAELNEAKLKGSVKEVATLKLRDG 341
R +LD +++R R+L +++ + + L EAK+ T + DG
Sbjct: 708 REKLDKEEEERRRRELLEKESEEKERRLREAKIAAFFAPNQTKEGSDG 755
>SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2386
Score = 25.8 bits (54), Expect = 4.7
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -3
Query: 349 MNVPSRSFKVAT-SFTLPFSLASFSSATLVLYCSSVRSLVSRFCL 218
MN+ F + T ++TLPF + + + A +V +S V+ CL
Sbjct: 726 MNISEGDFLIRTQAYTLPFLVLTKNKALIVRIAELSQSDVATLCL 770
>SPAC589.09 |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 388
Score = 25.4 bits (53), Expect = 6.2
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = -2
Query: 551 PQFTHNEELVSPHGAVVNLVLDRFSYELFVAVNISGIYSSVAHINSCLDYF 399
PQ T + + SP VN++ D ++ L N+ YS V ++ SCL+Y+
Sbjct: 188 PQKTLKDSMDSPQN--VNVLFDLSNFSLH---NMD--YSFVKYLASCLEYY 231
>SPBPB7E8.01 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 569
Score = 25.0 bits (52), Expect = 8.3
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 420 DMGYRAIDTAYIYGNE 467
DMGY A+D AY+ +E
Sbjct: 233 DMGYEAVDLAYVLFHE 248
>SPCC1620.11 |mug87||nucleoporin Nic96 homolog|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 851
Score = 25.0 bits (52), Expect = 8.3
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +3
Query: 441 DTAYIYGNEKLIGKAIKNKIDDGTV 515
D+ ++GN+ +I KA + +DG+V
Sbjct: 228 DSVTVFGNKGIISKAFDIETEDGSV 252
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,226,465
Number of Sequences: 5004
Number of extensions: 42580
Number of successful extensions: 149
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 148
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 256184654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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