Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11h05
(591 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0085 - 22265143-22265226,22265294-22265602,22266915-222671... 71 9e-13
01_06_1336 + 36396904-36397014,36397141-36397191,36397681-363977... 65 3e-11
01_06_1338 + 36411536-36411646,36411738-36411791,36411898-364119... 65 5e-11
10_01_0070 + 902999-903354,904354-904600,904718-904897,905087-90... 60 1e-09
02_01_0179 - 1227573-1227803,1227916-1228138,1228159-1228185,122... 60 1e-09
10_01_0069 + 890634-890941,892146-892395,893146-893175,894956-89... 58 5e-09
04_04_0032 + 22291469-22291818,22292438-22292681,22292873-222930... 56 3e-08
04_01_0350 - 4610444-4610668,4612181-4612969 54 1e-07
04_04_0033 + 22295974-22296290,22296441-22296684,22296797-222969... 53 2e-07
04_04_0034 + 22298636-22298952,22299057-22299300,22299395-222995... 51 6e-07
10_01_0065 + 845447-846187,846969-847193 50 1e-06
03_02_0297 + 7196624-7196931,7198015-7198258,7198385-7198573,719... 49 2e-06
10_01_0066 + 848523-849269,849520-849741 49 3e-06
05_05_0196 + 23152389-23152658,23153042-23153092,23153167-231532... 47 1e-05
01_06_1337 + 36404245-36404355,36404467-36404517,36405304-364053... 44 1e-04
09_04_0688 + 19475847-19477034,19477133-19477384,19477778-194778... 29 3.7
09_04_0493 - 18046553-18046990,18047061-18047180,18047290-180474... 29 3.7
12_02_0499 - 19725896-19726339,19726918-19726960,19727286-197273... 28 4.8
08_02_0536 - 18302394-18302826,18302903-18303183,18303480-183037... 28 4.8
04_03_0436 + 15918144-15918377,15918514-15918717,15918813-15918911 28 4.8
01_06_1154 - 34955235-34955827,34955912-34956045,34956142-349563... 28 4.8
11_05_0026 - 18462749-18462841,18463642-18463726,18463989-184640... 28 6.4
11_04_0216 - 14954047-14956098 28 6.4
06_02_0111 - 11958372-11958713,11959367-11959633,11959729-119601... 27 8.5
05_07_0347 - 29440541-29440664,29440908-29441020,29441522-294416... 27 8.5
02_01_0471 - 3364215-3364912,3365511-3365742,3365827-3366198,336... 27 8.5
>05_05_0085 -
22265143-22265226,22265294-22265602,22266915-22267187,
22267413-22267500,22267620-22267696,22267791-22267841,
22267967-22268077
Length = 330
Score = 70.5 bits (165), Expect = 9e-13
Identities = 36/86 (41%), Positives = 47/86 (54%)
Frame = +3
Query: 330 LRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDG 509
L G +P + LGT P + V A+ GYR ID A Y NEK IG A+K D+G
Sbjct: 7 LNTGAKIPSVGLGTWQAEPGVVGNAVYAAVKAGYRHIDCAQAYFNEKEIGVALKKVFDEG 66
Query: 510 TVRRDELFIMGKLWSTFHRTDLVETA 587
V+R+++FI KLW T H + V A
Sbjct: 67 IVKREDIFITSKLWCTNHAPEDVPVA 92
>01_06_1336 +
36396904-36397014,36397141-36397191,36397681-36397757,
36397876-36397963,36398616-36398891,36399002-36399250,
36400315-36400398
Length = 311
Score = 65.3 bits (152), Expect = 3e-11
Identities = 31/78 (39%), Positives = 44/78 (56%)
Frame = +3
Query: 330 LRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDG 509
L G +P + LGT P + + V A+ GYR ID A +Y NE +G A+K ++G
Sbjct: 7 LNTGAKIPSVGLGTWQSDPGVVGDAVYAAVKAGYRHIDCARMYKNENEVGIALKKLFEEG 66
Query: 510 TVRRDELFIMGKLWSTFH 563
V+R++LFI KLW H
Sbjct: 67 VVKREDLFITSKLWCDCH 84
>01_06_1338 +
36411536-36411646,36411738-36411791,36411898-36411974,
36412108-36412195,36412289-36412561,36412651-36412968
Length = 306
Score = 64.9 bits (151), Expect = 5e-11
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = +3
Query: 330 LRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEK-LIGKAIKNKIDD 506
L G +P + LGT + ++V A+ GYR ID A +Y NE+ +IG A+K DD
Sbjct: 7 LNTGARIPSVGLGTYKAGTGVVADVVSAAVKAGYRHIDCAPLYKNEQEVIGGALKKLFDD 66
Query: 507 GTVRRDELFIMGKLW 551
G V+R++LFI K+W
Sbjct: 67 GVVKREDLFITSKIW 81
>10_01_0070 +
902999-903354,904354-904600,904718-904897,905087-905332
Length = 342
Score = 60.1 bits (139), Expect = 1e-09
Identities = 34/81 (41%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Frame = +3
Query: 330 LRDGTFMPVIALGTALLP------PRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIK 491
LR G MP++ +GTA P P + V AID GYR DTA YG E +G+A+
Sbjct: 21 LRSGKPMPLVGMGTASFPLDAPQLPATVRDAVLRAIDAGYRHFDTAAAYGTEAPLGEAVL 80
Query: 492 NKIDDGTV-RRDELFIMGKLW 551
+ G V RD+L+I KLW
Sbjct: 81 EAVRAGMVASRDDLYITSKLW 101
>02_01_0179 -
1227573-1227803,1227916-1228138,1228159-1228185,
1228519-1228651,1228748-1228865,1229357-1229451,
1229886-1230048
Length = 329
Score = 60.1 bits (139), Expect = 1e-09
Identities = 29/82 (35%), Positives = 44/82 (53%)
Frame = +3
Query: 318 ATLKLRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNK 497
A L L G MP + LG + +++ +A+ +GYR D A Y NE +G A+
Sbjct: 11 AALALSSGHTMPSVGLGVWRMDSPAIRDLIHSALRIGYRHFDCAADYQNEAEVGDALAEA 70
Query: 498 IDDGTVRRDELFIMGKLWSTFH 563
G V+R++LFI KLW++ H
Sbjct: 71 FQTGLVKREDLFITTKLWNSDH 92
>10_01_0069 +
890634-890941,892146-892395,893146-893175,894956-895135,
895418-895669
Length = 339
Score = 58.0 bits (134), Expect = 5e-09
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Frame = +3
Query: 330 LRDGTFMPVIALGTALLP-----PRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKN 494
L G MP + +GTA P P ++V AI+ GYR DTA +Y E ++G A+
Sbjct: 6 LSSGKPMPRVGMGTASFPLGATDPSTVKDVVLRAIEAGYRHFDTAAVYQTEAILGDAVAE 65
Query: 495 KIDDGTV-RRDELFIMGKLW 551
+ G V RDEL+I KLW
Sbjct: 66 AVRAGLVASRDELYITSKLW 85
>04_04_0032 +
22291469-22291818,22292438-22292681,22292873-22293052,
22293843-22294070
Length = 333
Score = 55.6 bits (128), Expect = 3e-08
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Frame = +3
Query: 339 GTFMPVIALGTALLPP---RLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDG 509
G +P + LGTA L + A+++GYR IDTA +YG+E+++G+A+ G
Sbjct: 25 GRAVPAVGLGTASLRSVGEESFRGALLAALEVGYRHIDTASVYGSERVVGEAVAGAARRG 84
Query: 510 TVR-RDELFIMGKLWSTFHRTDLV 578
+ R+E+F+ K+W T DLV
Sbjct: 85 VIACREEVFVTTKVWCTQCHPDLV 108
>04_01_0350 - 4610444-4610668,4612181-4612969
Length = 337
Score = 53.6 bits (123), Expect = 1e-07
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = +3
Query: 315 VATLKLRDGTFMPVIALGT-ALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIK 491
V + L G MPV+ GT + PP + A+ +GYR +DTA +YG E +G A+
Sbjct: 20 VPCVTLNSGHAMPVLGFGTGSSTPPADLAATIAHAVRLGYRHLDTAAVYGTEGAVGAAVA 79
Query: 492 NKIDDGTV-RRDELFIMGKL 548
+ G V R ELF+ KL
Sbjct: 80 EAVRCGAVASRGELFVTTKL 99
>04_04_0033 +
22295974-22296290,22296441-22296684,22296797-22296976,
22297749-22297979
Length = 323
Score = 52.8 bits (121), Expect = 2e-07
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Frame = +3
Query: 318 ATLKLRDGTFMPVIALGTALLP--PRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIK 491
A L+ D MP + +G A P P + V A++ G+R DTA +Y E +G+AI
Sbjct: 8 AVLRHGDARPMPAVGMGVAEYPSTPERTRDAVLAALEAGFRHFDTASLYRTEAPLGEAIA 67
Query: 492 NKIDDGTV-RRDELFIMGKLWSTFHRTDLV 578
G + R+E F+ KLW T DLV
Sbjct: 68 EATRRGLLASREEAFVTTKLWCTQCHPDLV 97
>04_04_0034 +
22298636-22298952,22299057-22299300,22299395-22299574,
22300819-22300842,22301055-22301285
Length = 331
Score = 51.2 bits (117), Expect = 6e-07
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Frame = +3
Query: 303 SVKEVATLKLRDGTFMPVIALGTA---LLPPRLATEIVETAIDMGYRAIDTAYIYGNEKL 473
+V EVA L+ G MP + +GTA P A+++G+R DTA +YG E
Sbjct: 3 AVPEVA-LRHGAGRPMPAVGVGTADSAATSPETKRGAALAALEVGFRHFDTAALYGTEAP 61
Query: 474 IGKAIKNKIDDGTV-RRDELFIMGKLWST 557
+G+AI G V R+E+F+ KLW T
Sbjct: 62 LGEAIAEATRRGLVASREEVFVTTKLWCT 90
>10_01_0065 + 845447-846187,846969-847193
Length = 321
Score = 50.0 bits (114), Expect = 1e-06
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Frame = +3
Query: 348 MPVIALGTALLP---PRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTV- 515
MP + +GTA P T + AI++GYR DTA IY E +G+A+ + G +
Sbjct: 16 MPRVGMGTAAFPFTSSEDTTAAMLRAIELGYRHFDTARIYATEGCVGEAVAEAVRRGLIA 75
Query: 516 RRDELFIMGKLW-STFHRTDLVETA 587
R ++F+ K+W S H +V A
Sbjct: 76 SRADVFVTSKIWCSDLHAGRVVPAA 100
>03_02_0297 +
7196624-7196931,7198015-7198258,7198385-7198573,
7198650-7198874
Length = 321
Score = 49.2 bits (112), Expect = 2e-06
Identities = 33/80 (41%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Frame = +3
Query: 339 GTFMPVIALGTALLPPRLAT--EIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGT 512
G MP + +GTA+ PR V AI+ GYR DTA Y E IG+A + G
Sbjct: 12 GFGMPRVGMGTAVQGPRPEPIRRAVLKAIEAGYRHFDTAAHYETEAPIGEAAAEAVRSGA 71
Query: 513 V-RRDELFIMGKLW-STFHR 566
+ R +LFI KLW S HR
Sbjct: 72 IASRADLFITSKLWCSDAHR 91
>10_01_0066 + 848523-849269,849520-849741
Length = 322
Score = 48.8 bits (111), Expect = 3e-06
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Frame = +3
Query: 348 MPVIALGTALLPPRLATEIVET---AIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTV- 515
MP I +GTA P + E AI++GYR DTA +Y E + +A+ + G V
Sbjct: 18 MPRIGMGTAAFPFTSSEETTAALLRAIELGYRHFDTARLYATEGCVSEAVAEAVRRGLVA 77
Query: 516 RRDELFIMGKLW-STFHRTDLVETA 587
R ++F+ KLW S H +V A
Sbjct: 78 SRADVFVTSKLWCSDLHAGRVVPAA 102
>05_05_0196 +
23152389-23152658,23153042-23153092,23153167-23153240,
23153356-23153443,23153541-23153738,23153824-23153895,
23154034-23154093,23154194-23154370,23154975-23155064
Length = 359
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/67 (31%), Positives = 38/67 (56%)
Frame = +3
Query: 357 IALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFI 536
+A+ + + A ++ + GYR +DTA YG E+ +GK +K ++ G + R +LF+
Sbjct: 69 VAMASKPILSVFANNLIVNHLQAGYRHVDTAAQYGIEQEVGKGLKAAMEAG-INRKDLFV 127
Query: 537 MGKLWST 557
K+W T
Sbjct: 128 TSKIWCT 134
>01_06_1337 +
36404245-36404355,36404467-36404517,36405304-36405337,
36405428-36405485,36405499-36405586,36406110-36406385,
36406505-36406753,36407558-36407641
Length = 316
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/59 (37%), Positives = 30/59 (50%)
Frame = +3
Query: 330 LRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDD 506
L G +P + LGT P + V A+ GYR ID A Y NEK +G A+K ++
Sbjct: 7 LNTGAKIPSVGLGTWQSDPGVVGNAVYAAVKAGYRHIDCASAYNNEKEVGLALKKLFEE 65
>09_04_0688 +
19475847-19477034,19477133-19477384,19477778-19477858,
19477907-19478072,19479009-19479445,19479781-19479837
Length = 726
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = -3
Query: 349 MNVPSRSFKVATSFTLPFSLASFSSATLVLYCSSVRSLVSRFCLPLSKRRRP 194
+NV +F T LPFS S + +LY SS+ LV R LP+S + P
Sbjct: 405 LNVTGGNFSPPTQ-KLPFSATSIDENSSLLYYSSI-DLVGR--LPMSSSKSP 452
>09_04_0493 -
18046553-18046990,18047061-18047180,18047290-18047478,
18047596-18047739,18048673-18048900,18049659-18049838,
18050304-18050399,18051096-18051262,18051356-18051773,
18052335-18052517,18053846-18053953,18054053-18054246,
18054503-18054662
Length = 874
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +3
Query: 303 SVKEVATLKLRDGTFMPVIALGTALLPPRLATEIVETAIDM 425
S V +L LRDG F P I T+L+ LA E E A+D+
Sbjct: 664 SASAVLSLMLRDG-FYPTILTFTSLVKVVLAREDFEGALDL 703
>12_02_0499 -
19725896-19726339,19726918-19726960,19727286-19727389,
19727784-19728539
Length = 448
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 183 SPGSGRRRLDNGKQKRDTRDLTDEQYKTRVAELNEAK-LKGSVKEVATLKLRDGTFMPVI 359
SPG+GR+R ++R + + AE EA+ L+G K +A L+L M ++
Sbjct: 209 SPGAGRKRRSKQGRRRGRAMEAEHFVRIADAEPTEARPLQGLWKLIARLRLHTKGIMAIM 268
Query: 360 AL 365
L
Sbjct: 269 QL 270
>08_02_0536 -
18302394-18302826,18302903-18303183,18303480-18303747,
18303959-18303996,18304459-18304761
Length = 440
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +3
Query: 387 RLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKID 503
R+ATE ++ AI+ GY+ I Y G+ +G+ ++ +++
Sbjct: 317 RVATEKIQEAINHGYKRIAVLYGGGHMPDLGRRLREELN 355
>04_03_0436 + 15918144-15918377,15918514-15918717,15918813-15918911
Length = 178
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = +3
Query: 402 IVETAIDMGYRAIDTAYIYG---NEKLIGKAIK 491
++ A+ G +DTA IYG NE L+GKA++
Sbjct: 49 LIHHAVAAGVTLLDTADIYGPHANEALLGKALQ 81
>01_06_1154 -
34955235-34955827,34955912-34956045,34956142-34956389,
34956431-34956901
Length = 481
Score = 28.3 bits (60), Expect = 4.8
Identities = 21/78 (26%), Positives = 34/78 (43%)
Frame = +2
Query: 5 FYSPSRRREKTPSFRKSKILDIFLIFVLEIFSKNKQNEDNLVHIVLLCVQEDNFGQDGGV 184
F+ R++ + + L + +LE K + NEDN+++IV D+ DG
Sbjct: 234 FFLEERKKLASTKAMDNNGLKCAIDHILEAQQKGEINEDNVLYIVENINVADDAVVDGVG 293
Query: 185 SRKRASAFGQRQTKTRHE 238
R G+ Q K R E
Sbjct: 294 DRGARVNHGEIQEKLRRE 311
>11_05_0026 -
18462749-18462841,18463642-18463726,18463989-18464021,
18464278-18464411
Length = 114
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 229 RFCLPLSKRRRPLPGDSSILTEVIF 155
RF P +RR PLP +S +E +F
Sbjct: 9 RFSTPPQRRRNPLPSSASTTSEEVF 33
>11_04_0216 - 14954047-14956098
Length = 683
Score = 27.9 bits (59), Expect = 6.4
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = -2
Query: 338 VA*FQSSHFLHAPFQLSFVQFCDPGLILFICEVSRVSFLFAVVQTPTPASG 186
VA F +SH LHA + L F + F ++ + L AV+ T P +G
Sbjct: 40 VAAFAASHPLHAAYALFFARHLLALACFFSPLLATTALLLAVLVTVAPCAG 90
>06_02_0111 -
11958372-11958713,11959367-11959633,11959729-11960124,
11961246-11961320
Length = 359
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = -2
Query: 569 SAMECTPQFTHNEELVSPHGAVVNLVLDRFSYELFVAVNISGIYSSVA 426
S + +F H++++ S H V N+V F LF + ++ SS++
Sbjct: 104 SVAKSLAEFKHSQDVSSHHVVVANMVPGSFYERLFTSDSVHFFCSSIS 151
>05_07_0347 -
29440541-29440664,29440908-29441020,29441522-29441689,
29442341-29442391,29442518-29442555,29442885-29442978
Length = 195
Score = 27.5 bits (58), Expect = 8.5
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 456 YGNEKLIGKAIKNKIDDGTVRRDELFIMGKLWSTFHRTDLVETA 587
YG KLIG K + GT+R D ++G+ + H +D ETA
Sbjct: 127 YGR-KLIGATDPQKSEPGTIRGDLAVVVGR--NIIHGSDGPETA 167
>02_01_0471 - 3364215-3364912,3365511-3365742,3365827-3366198,
3366324-3366449,3367056-3367262,3367399-3367492,
3367575-3367621,3367705-3368157,3368261-3368560,
3368656-3369114,3369189-3369410,3369659-3369890,
3370051-3370422,3371210-3371322,3371682-3371903,
3371977-3372180,3372308-3372572,3373123-3373311,
3373441-3373768,3373843-3374248,3374339-3374648,
3375677-3375837,3376825-3376998,3377265-3377609,
3377713-3377754,3378585-3378734,3378847-3379002,
3379088-3379540,3379651-3379966,3380402-3380839,
3381475-3381697,3383538-3383852,3384033-3384095,
3384699-3384903,3385362-3385425,3386014-3386204
Length = 3048
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 339 GTFMPVIALGTALLPPR-LATEIVETAIDMGYRAIDTAYIYGNEKLI 476
G+ P +G+ ++ PR ++T + E +D G + + I+G+ LI
Sbjct: 2737 GSLEPFFGIGSDVISPRKISTSLAEN-VDFGRQCLTAVQIHGDNYLI 2782
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,679,706
Number of Sequences: 37544
Number of extensions: 275161
Number of successful extensions: 1064
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1400060088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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