Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11h05
(591 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 8e-14
SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 67 1e-11
SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1) 50 1e-06
SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 43 2e-04
SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_52108| Best HMM Match : DUF1053 (HMM E-Value=6) 31 0.70
SB_7538| Best HMM Match : Neur_chan_memb (HMM E-Value=6e-24) 31 0.70
SB_10801| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_49419| Best HMM Match : SCP (HMM E-Value=5e-14) 29 2.8
SB_4101| Best HMM Match : SRP19 (HMM E-Value=9.7) 29 3.8
SB_56768| Best HMM Match : VWA (HMM E-Value=0.0042) 29 3.8
SB_30758| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_41759| Best HMM Match : Ion_trans (HMM E-Value=1.1e-08) 27 8.7
SB_29853| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_16098| Best HMM Match : Abhydrolase_1 (HMM E-Value=4.5e-22) 27 8.7
SB_3786| Best HMM Match : THAP (HMM E-Value=7.5e-07) 27 8.7
SB_47317| Best HMM Match : DNA_ligase_OB (HMM E-Value=2.2) 27 8.7
SB_25299| Best HMM Match : RVT_1 (HMM E-Value=1.1e-23) 27 8.7
SB_22509| Best HMM Match : ANF_receptor (HMM E-Value=0) 27 8.7
SB_6687| Best HMM Match : DedA (HMM E-Value=4.1) 27 8.7
>SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 340
Score = 74.1 bits (174), Expect = 8e-14
Identities = 40/92 (43%), Positives = 52/92 (56%)
Frame = +3
Query: 315 VATLKLRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKN 494
+AT+KL +G MPV+ LGT P V+ AI GYR ID AY Y NEK +G A++
Sbjct: 1 MATVKLNNGLEMPVLGLGTWKSKPGQVENAVKFAIKEGYRHIDCAYAYRNEKEVGDALRE 60
Query: 495 KIDDGTVRRDELFIMGKLWSTFHRTDLVETAC 590
+ V R +LFI KLW+T H V + C
Sbjct: 61 LL-GSVVERKDLFITSKLWNTKHNPKDVRSNC 91
>SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 407
Score = 66.9 bits (156), Expect = 1e-11
Identities = 31/62 (50%), Positives = 40/62 (64%)
Frame = +3
Query: 405 VETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFIMGKLWSTFHRTDLVET 584
V AI++GYR ID A IYGNE IG+A+ + +G V+R+ELF+ KLW H D V
Sbjct: 71 VRLAIELGYRHIDCAEIYGNEGEIGEALSEVLTEGKVKREELFVTSKLWCDSHHPDDVLP 130
Query: 585 AC 590
AC
Sbjct: 131 AC 132
Score = 36.7 bits (81), Expect = 0.014
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +3
Query: 405 VETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFIMGKLWST 557
V A ++GYR ID A I+GNE G+A+ + G V+R+E G W +
Sbjct: 18 VRLAAELGYRLIDCAEIHGNE---GEALSGVLTKGKVKREE---CGSTWQS 62
>SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1)
Length = 93
Score = 50.0 bits (114), Expect = 1e-06
Identities = 28/78 (35%), Positives = 44/78 (56%)
Frame = +3
Query: 330 LRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDG 509
L DG +P LG L + + V A++ GYR IDTA Y NEK +G+A++ +
Sbjct: 3 LSDGYKIPRFGLGLYDLDEKHTKQAVLWALENGYRMIDTAASYNNEKRVGEALR----ES 58
Query: 510 TVRRDELFIMGKLWSTFH 563
V R E++++ K++ T H
Sbjct: 59 AVPRSEVYLVTKVYHTDH 76
>SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 46.0 bits (104), Expect = 2e-05
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +3
Query: 318 ATLKLRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYG-NEKLIGKAIKN 494
A + L G MPV+ GTA L + +V+TA++ GYR IDTA Y +E + KAI
Sbjct: 327 ADVLLASGYTMPVMGFGTATLGEDTLS-VVKTALETGYRLIDTAQGYPLSEPQVAKAI-- 383
Query: 495 KIDDGTVRRDELFIMGKL 548
D G R+D +FI+ KL
Sbjct: 384 -ADSGIPRKD-IFIITKL 399
>SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 333
Score = 42.7 bits (96), Expect = 2e-04
Identities = 26/82 (31%), Positives = 47/82 (57%)
Frame = +3
Query: 318 ATLKLRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNK 497
+T + DG +P++ LG + + A V A++ GYR IDTA Y NE+ +G+A++
Sbjct: 66 STRIMNDGRKIPLLGLGAHDIHSKQA---VLWALESGYRLIDTASRYHNEQSVGEAVR-- 120
Query: 498 IDDGTVRRDELFIMGKLWSTFH 563
+ R E++++ K++ T H
Sbjct: 121 --CSNIPRCEIYVVTKVYFTEH 140
>SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 36.7 bits (81), Expect = 0.014
Identities = 17/45 (37%), Positives = 29/45 (64%)
Frame = +3
Query: 414 AIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFIMGKL 548
A+ GYR +DTA IY NEK +G A++ ++R+++++ KL
Sbjct: 53 ALKNGYRMLDTADIYQNEKEVGSAVRK----SGLKREDIYVTTKL 93
>SB_52108| Best HMM Match : DUF1053 (HMM E-Value=6)
Length = 349
Score = 31.1 bits (67), Expect = 0.70
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -2
Query: 536 NEELVSPHGAVVNLVLDRFSYELFVAVNISGIYSSVAHI 420
N+ELV+ H VLD+F+ E FVA + + SVA +
Sbjct: 66 NQELVTAHDDAQENVLDQFADEAFVASAFAAMGESVASV 104
>SB_7538| Best HMM Match : Neur_chan_memb (HMM E-Value=6e-24)
Length = 358
Score = 31.1 bits (67), Expect = 0.70
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +2
Query: 5 FYSPSRRREKTPSFRKSKILDIFLIFVLEIFSKNKQNEDNL-VHIVLLCVQEDNFGQDGG 181
FY S RR P F + I+D +L V F K K+ ED H+ L + + G++GG
Sbjct: 140 FYHRSSRR--MPRFLRIVIID-WLARVAFPFKKRKREEDRFNCHVNHLSSRNEGLGREGG 196
Query: 182 VSRKRASAFGQRQTKTRHERP 244
S T R+ERP
Sbjct: 197 SYSMVESIID--NTDQRNERP 215
>SB_10801| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 910
Score = 30.3 bits (65), Expect = 1.2
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = -3
Query: 319 ATSFTLPFSLASFSSATLVLYCSSVRSLVSRFCLPLSKRRRPLPGDSSILTEVIF-LNTK 143
AT+ LAS+ +A+ +LY S L+ F ++K R+ +P +S I VI L++
Sbjct: 314 ATAAIFASLLASYYAASRLLYSLSYDGLICMFLNKINKSRQ-VPLNSVIAVGVITGLSSL 372
Query: 142 KHNMNQIIFILFVLT 98
NM +++ ++ V T
Sbjct: 373 VFNMRELVELVAVAT 387
>SB_49419| Best HMM Match : SCP (HMM E-Value=5e-14)
Length = 555
Score = 29.1 bits (62), Expect = 2.8
Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 3/106 (2%)
Frame = +3
Query: 144 FVF-RKITSVKMEESPGSG--RRRLDNGKQKRDTRDLTDEQYKTRVAELNEAKLKGSVKE 314
FV+ R++ V + S GSG RRR +G R L D + + + ++
Sbjct: 31 FVYARRLLGVMLRFSSGSGKRRRRSIDGVLSRTKTSLGDSHFAVLMGGRGSNSISFALDT 90
Query: 315 VATLKLRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAY 452
+++ M ++A +ALLP I+ D Y + T Y
Sbjct: 91 TGSMRQEKMAMMTIVAGLSALLPGGTTKFILSPFNDPAYGPV-TVY 135
>SB_4101| Best HMM Match : SRP19 (HMM E-Value=9.7)
Length = 699
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +3
Query: 144 FVFRKITSVKMEESPGSGRRRLDNGKQKRDTRDLTDEQYKTRVAELNEAKLK 299
F K +K+ G D+GK K R LT KTR A++ E ++
Sbjct: 278 FEMEKKLEIKLVAVDALGNVMWDSGKYKTKARALTSAATKTREAKVQEVLIR 329
>SB_56768| Best HMM Match : VWA (HMM E-Value=0.0042)
Length = 815
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +3
Query: 192 SGRRRLDNGKQKRDTRDLTDEQYKTRVAELNEAKLKGSVKEVATLK 329
S R+D K RD L E++ R+A LN K KG ++ A +K
Sbjct: 90 SSASRIDGKKVIRDLAGLLRERFDERIAALNAIK-KGVEEDYAAVK 134
>SB_30758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 424
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = -2
Query: 248 CEVSRVSFLFAVVQTPTPASGR--LLHLDRSYL-PEHKEAQYEPDYLH 114
C+ RV L + P G L HL R + P H+ Y+ DY+H
Sbjct: 322 CDYYRVKMLLEYLNRQEPGLGEATLRHLLRPRVDPPHEHPAYDYDYIH 369
>SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1076
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +2
Query: 14 PSRRREKTPSFRKSKILDIFLIFVLEIFSKNKQNEDNLVHIVLLCV 151
PS RR SF LD F + + K KQ +H++ C+
Sbjct: 748 PSTRRVHATSFVMPFFLDAFALSIPPDAGKTKQCHAACLHVITFCI 793
>SB_41759| Best HMM Match : Ion_trans (HMM E-Value=1.1e-08)
Length = 276
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = -2
Query: 503 VNLVLDRFS-YELFVAVNISGIYSSVAHINSCLDYF 399
V+ LDR+S Y L V + ++ +++ VAH +C+ YF
Sbjct: 163 VSRKLDRYSEYGLAVVILLTCLFTLVAHWLACIWYF 198
>SB_29853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Frame = -3
Query: 232 SRFCLPLSKRRRPLPGDSSILTEVIFLNTK-----KHNMNQIIFILFVLTKDFQN 83
S F PLS RR+P P S+ LT + L + +M I+FI V T+ F++
Sbjct: 34 SAFSKPLSSRRKPDPRYSNALTTRLRLQHEDVQDFNVSMKFIVFIARVQTEKFRS 88
>SB_16098| Best HMM Match : Abhydrolase_1 (HMM E-Value=4.5e-22)
Length = 863
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 197 PASGRLLHLDRSYLPEHKEAQYEPDYLH 114
P S RLL + + + +H +A YE Y+H
Sbjct: 530 PTSDRLLEIAEARILKHLKAHYERKYVH 557
>SB_3786| Best HMM Match : THAP (HMM E-Value=7.5e-07)
Length = 807
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = -3
Query: 199 RPLPGDSSILTEVIFLNTKKHNMNQIIFILFVLTKDFQNKN*KNIQN 59
R L GD + T T++H QI L + DF+N N N N
Sbjct: 517 RLLLGDPAPPTTNAERGTQEHRFQQIALTLMQVRNDFRNNNNNNNNN 563
>SB_47317| Best HMM Match : DNA_ligase_OB (HMM E-Value=2.2)
Length = 167
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = -3
Query: 328 FKVATSFTLPFSLASFSSATLVLYCSSVRSLVSRFCLPLSKRRRPLP 188
F+ T F LPF + F C S +S V R C P S+R+ P P
Sbjct: 109 FRWKTVF-LPFRI--FLWVRHAAECRSNQSTVFRHCYPASQRQSPFP 152
>SB_25299| Best HMM Match : RVT_1 (HMM E-Value=1.1e-23)
Length = 407
Score = 27.5 bits (58), Expect = 8.7
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = -3
Query: 217 PLSKRRRPLPGDSSIL-TEVIFLNTKKHNMNQI-IFILFVLTKDFQNKN*KNI--QNLRF 50
P+ + +P D I+ +++ L +NM I +FV D NKN KN NL
Sbjct: 334 PVFEELNIVPFDKRIIYLQLVLLFKAMNNMTPCYIRDMFVKCSDVHNKNTKNAANHNLVL 393
Query: 49 SKTRRLLSTTA 17
K R L+ TA
Sbjct: 394 PKARTTLAKTA 404
>SB_22509| Best HMM Match : ANF_receptor (HMM E-Value=0)
Length = 752
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +2
Query: 32 KTPSFRKSKILDIFLIFVLEIFSKNKQNEDNLVHIVLLCVQEDNFG 169
K P F K + + + +L++ +K++ D + +V+ C+Q DN G
Sbjct: 233 KLPPFPKEEDFEATIKSLLDL---SKKHSDTVHVVVMFCIQRDNTG 275
>SB_6687| Best HMM Match : DedA (HMM E-Value=4.1)
Length = 295
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 468 KLIGKAIKNKIDDGTVRRDELFIMGKLWSTFHRTDL 575
+ + KAI + ID + +D L IM ++ S F TD+
Sbjct: 190 QFVAKAIHDMIDSSSGAKDSLAIMTEVASVFEFTDV 225
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,513,498
Number of Sequences: 59808
Number of extensions: 307610
Number of successful extensions: 3263
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3260
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1434459094
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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