Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11h05
         (591 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    23   7.4  
U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles ...    23   9.8  
EF519508-1|ABP73571.1|  250|Anopheles gambiae APL2 protein.            23   9.8  

>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor 24
           protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 15/55 (27%), Positives = 28/55 (50%)
 Frame = -2

Query: 293 LSFVQFCDPGLILFICEVSRVSFLFAVVQTPTPASGRLLHLDRSYLPEHKEAQYE 129
           L+   FC  GL+ +IC+ +     +A     T    +LL ++ S++  + +AQ E
Sbjct: 265 LAVTAFCSVGLLFYICDEAH----YASFNVRTNFQKKLLMVELSWM--NTDAQTE 313


>U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S8 mRNA, complete cds.
           ).
          Length = 135

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = -3

Query: 277 SATLVLYCSSVRSLV-SRFCLPLSKRRRPLPGDSSILTE 164
           +A +V+  S  R    S + LPL K+R    G+  +L++
Sbjct: 28  NAIIVIDASPFRQWYESHYLLPLGKKRELKAGEEDVLSK 66


>EF519508-1|ABP73571.1|  250|Anopheles gambiae APL2 protein.
          Length = 250

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +3

Query: 363 LGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKI 500
           L    +PP L   +   AI  G R +++    G+E ++ K   NK+
Sbjct: 149 LSVVRIPPNLRQLV---AIGNGIRTVESTATNGSELILLKLAHNKL 191


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 557,391
Number of Sequences: 2352
Number of extensions: 10830
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)