Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11h05
(591 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical ... 85 4e-17
AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical ... 85 4e-17
U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical pr... 81 6e-16
AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical ... 72 4e-13
U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical pr... 63 2e-10
Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical pr... 59 2e-09
U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical pr... 59 3e-09
Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical pr... 54 6e-08
Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical pr... 51 5e-07
U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical pr... 48 4e-06
U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical pr... 48 4e-06
Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U00033-13|AAC48300.1| 439|Caenorhabditis elegans Mechanosensory... 31 0.61
AL023835-11|CAA19495.1| 335|Caenorhabditis elegans Hypothetical... 28 5.7
Z72517-3|CAA96695.1| 717|Caenorhabditis elegans Hypothetical pr... 27 7.5
U43283-1|AAC69025.1| 412|Caenorhabditis elegans Hypothetical pr... 27 7.5
AF000197-8|AAB52897.2| 328|Caenorhabditis elegans Star (rna bin... 27 7.5
AF000197-7|AAU20839.1| 445|Caenorhabditis elegans Star (rna bin... 27 7.5
AF000197-6|AAP68907.1| 403|Caenorhabditis elegans Star (rna bin... 27 7.5
U80023-13|AAG24043.2| 348|Caenorhabditis elegans Hypothetical p... 27 10.0
U80023-12|AAY86287.1| 564|Caenorhabditis elegans Hypothetical p... 27 10.0
AF099913-2|AAC68749.1| 254|Caenorhabditis elegans Hypothetical ... 27 10.0
>AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1b protein.
Length = 316
Score = 85.0 bits (201), Expect = 4e-17
Identities = 38/83 (45%), Positives = 55/83 (66%)
Frame = +3
Query: 315 VATLKLRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKN 494
V +LKL G +P I LGT P ++TA+ GYR ID A++Y N+K +G+A+K
Sbjct: 2 VQSLKLNSGYSIPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKE 61
Query: 495 KIDDGTVRRDELFIMGKLWSTFH 563
+D+G V+R+ELFI K+W+TFH
Sbjct: 62 ILDEGKVKREELFITSKVWNTFH 84
>AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1a protein.
Length = 316
Score = 85.0 bits (201), Expect = 4e-17
Identities = 38/83 (45%), Positives = 55/83 (66%)
Frame = +3
Query: 315 VATLKLRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKN 494
V +LKL G +P I LGT P ++TA+ GYR ID A++Y N+K +G+A+K
Sbjct: 2 VQSLKLNSGYSIPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKE 61
Query: 495 KIDDGTVRRDELFIMGKLWSTFH 563
+D+G V+R+ELFI K+W+TFH
Sbjct: 62 ILDEGKVKREELFITSKVWNTFH 84
>U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical
protein C07D8.6 protein.
Length = 317
Score = 81.0 bits (191), Expect = 6e-16
Identities = 39/79 (49%), Positives = 52/79 (65%)
Frame = +3
Query: 318 ATLKLRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNK 497
A++KL +G MPVI LGT P V+TA+ GYR IDTA +Y NE+ IG AIK
Sbjct: 6 ASIKLSNGVEMPVIGLGTWQSSPAEVITAVKTAVKAGYRLIDTASVYQNEEAIGTAIKEL 65
Query: 498 IDDGTVRRDELFIMGKLWS 554
+++G V+R+ELFI K W+
Sbjct: 66 LEEGVVKREELFITTKAWT 84
>AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical
protein Y39G8B.2 protein.
Length = 339
Score = 71.7 bits (168), Expect = 4e-13
Identities = 35/81 (43%), Positives = 49/81 (60%)
Frame = +3
Query: 321 TLKLRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKI 500
T+ L G MPVI GT LP LA E V A++ GYR ID+A + N++ + IK+
Sbjct: 6 TVTLNSGYEMPVIGYGTWQLPKNLAAERVRDALEAGYRHIDSALSFKNQEEVAAGIKDWC 65
Query: 501 DDGTVRRDELFIMGKLWSTFH 563
VRR+ELF+ K+W+T+H
Sbjct: 66 KIRKVRREELFLSSKIWNTYH 86
>U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical
protein T08H10.1 protein.
Length = 333
Score = 62.9 bits (146), Expect = 2e-10
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +3
Query: 315 VATLKLRDGTFMPVIALGTALLPPRLA-TEIVETAIDMGYRAIDTAYIYGNEKLIGKAIK 491
V ++ L G +P+ LGT + T + A+D GYR IDTA++Y NE +IGK +
Sbjct: 3 VDSIPLNTGAQLPLFGLGTWQVKDEAELTVALRAALDAGYRLIDTAHLYQNEHIIGKVLH 62
Query: 492 NKIDDGTVRRDELFIMGKLWSTFH 563
I G ++R+++F+ KL T H
Sbjct: 63 EYISSGKLKREDIFVTSKLPFTAH 86
>Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical
protein ZC443.1 protein.
Length = 320
Score = 59.3 bits (137), Expect = 2e-09
Identities = 32/92 (34%), Positives = 48/92 (52%)
Frame = +3
Query: 312 EVATLKLRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIK 491
+V L +G MP I LGT + ++ A+ GYR IDTA +Y NE IG A+
Sbjct: 4 KVPIFTLSNGVLMPSIGLGTWQMTGEEGKTVIRNAVLAGYRHIDTATLYQNEHQIGDALA 63
Query: 492 NKIDDGTVRRDELFIMGKLWSTFHRTDLVETA 587
+G ++R+++FI K + D+VE A
Sbjct: 64 ELFAEGILKREDIFITTKAFCHEVAPDVVEEA 95
>U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical
protein C07D8.5 protein.
Length = 134
Score = 58.8 bits (136), Expect = 3e-09
Identities = 34/85 (40%), Positives = 45/85 (52%)
Frame = +3
Query: 324 LKLRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKID 503
L L + MP + LGT V+ A+ GY IDTA Y NE+ IG AIK I
Sbjct: 48 LTLSNAHSMPAVGLGTWQSNAEDVISAVKAAVKNGYSLIDTASGYNNEEFIGTAIKEVIA 107
Query: 504 DGTVRRDELFIMGKLWSTFHRTDLV 578
+G V+R++LFI K+ + F LV
Sbjct: 108 EGVVKREDLFITTKVPNLFSSLRLV 132
>Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical
protein F53F1.3 protein.
Length = 283
Score = 54.4 bits (125), Expect = 6e-08
Identities = 26/76 (34%), Positives = 44/76 (57%)
Frame = +3
Query: 321 TLKLRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKI 500
++KL G P+I LGT + +++ A+ GYR DTA +Y NEK IG A++ +
Sbjct: 2 SIKLNTGYDCPLIGLGTYKIIGDQVLPVLDAALTAGYRLFDTAKVYNNEKEIGDALEILL 61
Query: 501 DDGTVRRDELFIMGKL 548
++R+++FI K+
Sbjct: 62 PKHNLKREDIFITTKM 77
>Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical
protein K07C5.2 protein.
Length = 301
Score = 51.2 bits (117), Expect = 5e-07
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = +3
Query: 327 KLRDGTFMPVIALGTALLPPRLATEI-VETAIDMGYRAIDTAYIYGNEKLIGKAIKNKID 503
K DG MP I LG + + + ++ +E A+ GYR DTA +Y NE +G ++K +
Sbjct: 13 KFSDGYEMPKIGLGISRIETQQDLDVSIEAALKSGYRQFDTANLYKNETFLGNSLKKYLP 72
Query: 504 DGTVRRDELFIMGKLWSTFHRTDLVET 584
+ R+++FI K+ T + + ET
Sbjct: 73 QFGLTREDVFITTKV-RTLNENTVEET 98
>U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical
protein ZK1290.5 protein.
Length = 321
Score = 50.0 bits (114), Expect = 1e-06
Identities = 30/79 (37%), Positives = 42/79 (53%)
Frame = +3
Query: 315 VATLKLRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKN 494
+ T L + MP+I LGT ++ + GYR IDTA YG EK +G A+KN
Sbjct: 2 IPTTVLSNNVEMPLIGLGTTHSGGYYHDAVLHSIKKCGYRLIDTAKRYGVEKQLGIAVKN 61
Query: 495 KIDDGTVRRDELFIMGKLW 551
+V R+E+F+ KLW
Sbjct: 62 ----CSVPREEMFLSTKLW 76
>U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical
protein C01G5.5 protein.
Length = 287
Score = 48.4 bits (110), Expect = 4e-06
Identities = 24/75 (32%), Positives = 43/75 (57%)
Frame = +3
Query: 327 KLRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDD 506
KL++G +P +ALGT V+ A+ +GYR+ DTA Y NEK +G A+K +
Sbjct: 3 KLKNGQEIPKLALGTYEAKGDQLFAAVDEALKVGYRSFDTAKYYENEKDLGLALKTLLPR 62
Query: 507 GTVRRDELFIMGKLW 551
+ +++++ K++
Sbjct: 63 HNICSEDIYLTSKVF 77
>U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical
protein C35D10.6 protein.
Length = 287
Score = 48.4 bits (110), Expect = 4e-06
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +3
Query: 348 MPVIALGT-ALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRD 524
MP+I +GT + + ++++ GYR IDTA +Y NE IG+ ++ + ++R+
Sbjct: 11 MPLIGIGTWQVQKEEILRQVIDAGFKEGYRFIDTAQVYNNEAKIGRILEKLLPANGLKRE 70
Query: 525 ELFIMGKL 548
+++I KL
Sbjct: 71 DIWITSKL 78
>Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical
protein F53F1.2 protein.
Length = 297
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +3
Query: 327 KLRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDD 506
KL G +P + GT + ++ A+ GYR DTA Y NEK +G+A+K +
Sbjct: 14 KLNSGYNIPFVGFGTYKVTGENVPPAIDAALTAGYRMFDTAKYYLNEKELGEALKILLPK 73
Query: 507 GTVRRDELFIMGKLW 551
+ R ++F+ K +
Sbjct: 74 HGLSRSDVFLTSKFF 88
>U00033-13|AAC48300.1| 439|Caenorhabditis elegans Mechanosensory
abnormality protein14 protein.
Length = 439
Score = 31.1 bits (67), Expect = 0.61
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = +3
Query: 399 EIVETAIDMGYRAIDTAYIYG---NEKLIGKAI 488
+IVETAI G IDT Y Y +E ++GKA+
Sbjct: 118 KIVETAIKQGINYIDTGYWYSQSRSESILGKAL 150
>AL023835-11|CAA19495.1| 335|Caenorhabditis elegans Hypothetical
protein Y37A1B.12 protein.
Length = 335
Score = 27.9 bits (59), Expect = 5.7
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -3
Query: 190 PGDS-SILTEVIFLNTKKHNMNQIIFILFVLTKDFQNKN*KNIQNLRFSKTRRLLST 23
PG + +TE+I NT + + FV TKDF N K+I++ + +L+ +
Sbjct: 90 PGTGKNYVTEIIAKNTFRSGLQSPYVKYFVATKDFPNN--KHIEDYKLKLKEQLIQS 144
>Z72517-3|CAA96695.1| 717|Caenorhabditis elegans Hypothetical
protein T28F4.4 protein.
Length = 717
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = -2
Query: 548 QFTHNEELVSPHGAVVNLVLDRFSYELFVAVNISGIYSSVAHINSCLDYFR 396
QFT + + GA+ +VL + L +S +++++AH+ S + FR
Sbjct: 429 QFTKEDFVHRTKGAIAKIVLVKERIRLAKVPALSELFNALAHVMSSPENFR 479
>U43283-1|AAC69025.1| 412|Caenorhabditis elegans Hypothetical
protein T25G12.5 protein.
Length = 412
Score = 27.5 bits (58), Expect = 7.5
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +3
Query: 180 ESPG--SGRRRLDNGKQKRDTRDLTDEQYKTRVAELNEAKLKGSVKEVATLKLRDGTFMP 353
++PG GR+ ++ G++ DTR +T E RV N G +VA +K D T
Sbjct: 214 DTPGLTRGRKEINMGQRCSDTRGITFED--VRVPAANVVGAPGEGFKVA-MKTFDKTRPT 270
Query: 354 VIALGTAL 377
V AL T +
Sbjct: 271 VAALATGV 278
>AF000197-8|AAB52897.2| 328|Caenorhabditis elegans Star (rna
binding protein) familyprotein 2, isoform a protein.
Length = 328
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = -3
Query: 226 FCLPLSKRRRPLP---GDSSILTEVIFLNTKKH 137
F SK PLP GDS++ TE +F+ K+H
Sbjct: 67 FQCEFSKESAPLPDAEGDSTVHTEKVFVPAKEH 99
>AF000197-7|AAU20839.1| 445|Caenorhabditis elegans Star (rna
binding protein) familyprotein 2, isoform c protein.
Length = 445
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = -3
Query: 226 FCLPLSKRRRPLP---GDSSILTEVIFLNTKKH 137
F SK PLP GDS++ TE +F+ K+H
Sbjct: 109 FQCEFSKESAPLPDAEGDSTVHTEKVFVPAKEH 141
>AF000197-6|AAP68907.1| 403|Caenorhabditis elegans Star (rna
binding protein) familyprotein 2, isoform b protein.
Length = 403
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = -3
Query: 226 FCLPLSKRRRPLP---GDSSILTEVIFLNTKKH 137
F SK PLP GDS++ TE +F+ K+H
Sbjct: 67 FQCEFSKESAPLPDAEGDSTVHTEKVFVPAKEH 99
>U80023-13|AAG24043.2| 348|Caenorhabditis elegans Hypothetical
protein F07C4.12a protein.
Length = 348
Score = 27.1 bits (57), Expect = 10.0
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 210 DNGKQKRDTRDLTDEQYKTRVAELNEAKLKGSVKE 314
D GK+ DTRD + Y V +E KLK + E
Sbjct: 160 DTGKEFEDTRDKVYKYYTRGVDPTDEKKLKEKLVE 194
>U80023-12|AAY86287.1| 564|Caenorhabditis elegans Hypothetical
protein F07C4.12b protein.
Length = 564
Score = 27.1 bits (57), Expect = 10.0
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 210 DNGKQKRDTRDLTDEQYKTRVAELNEAKLKGSVKE 314
D GK+ DTRD + Y V +E KLK + E
Sbjct: 376 DTGKEFEDTRDKVYKYYTRGVDPTDEKKLKEKLVE 410
>AF099913-2|AAC68749.1| 254|Caenorhabditis elegans Hypothetical
protein C29F9.8 protein.
Length = 254
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 190 PGDSSILT-EVIFLNTKKHNMNQIIFILFVLTKDFQNKN 77
P S+++ E++FL+ ++N Q+ IL L + Q+KN
Sbjct: 178 PHSSTLVALELVFLDIFEYNTFQVTVILLKLAAELQSKN 216
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,405,497
Number of Sequences: 27780
Number of extensions: 239957
Number of successful extensions: 932
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 931
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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