SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11h03
         (759 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC015994-1|AAH15994.1|  105|Homo sapiens chromosome 10 open read...    66   2e-10
AL358790-6|CAI52502.1|  105|Homo sapiens chromosome 10 open read...    66   2e-10
BX284668-3|CAH70057.1| 1898|Homo sapiens ciliary rootlet coiled-...    35   0.28 
BX284668-2|CAH70055.1| 2017|Homo sapiens ciliary rootlet coiled-...    35   0.28 
BC126912-1|AAI26913.1| 1132|Homo sapiens CROCC protein protein.        35   0.28 
BC126911-1|AAI26912.1| 1132|Homo sapiens CROCC protein protein.        35   0.28 
AL049569-4|CAI20365.1| 1898|Homo sapiens ciliary rootlet coiled-...    35   0.28 
AL049569-3|CAI20363.1| 2017|Homo sapiens ciliary rootlet coiled-...    35   0.28 
AB007914-1|BAA32290.2| 1919|Homo sapiens KIAA0445 protein protein.     35   0.28 
BC033082-1|AAH33082.1|  287|Homo sapiens KIAA1922 protein protein.     34   0.64 
AB067509-1|BAB67815.1|  370|Homo sapiens KIAA1922 protein protein.     34   0.64 
BC009239-1|AAH09239.1|  723|Homo sapiens leucine rich repeat and...    32   2.0  
AY358830-1|AAQ89189.1|  723|Homo sapiens leucine-rich protein pr...    32   2.0  
AL445222-17|CAH72931.1|  696|Homo sapiens leucine rich repeat an...    32   2.0  
AL445222-16|CAH72930.1|  723|Homo sapiens leucine rich repeat an...    32   2.0  
AK091589-1|BAC03703.1|  723|Homo sapiens protein ( Homo sapiens ...    32   2.0  
AK056203-1|BAB71119.1|  696|Homo sapiens protein ( Homo sapiens ...    32   2.0  
Z99496-4|CAM28258.1|  576|Homo sapiens chromosome 6 open reading...    31   6.0  
Z99496-1|CAI21605.1|  805|Homo sapiens chromosome 6 open reading...    31   6.0  
AL589993-1|CAI16048.1|  805|Homo sapiens chromosome 6 open readi...    31   6.0  
AL390069-4|CAM19612.1|  576|Homo sapiens chromosome 6 open readi...    31   6.0  
AL390069-1|CAI14134.1|  805|Homo sapiens chromosome 6 open readi...    31   6.0  
AF308284-1|AAG48252.1|  546|Homo sapiens serologically defined b...    31   6.0  

>BC015994-1|AAH15994.1|  105|Homo sapiens chromosome 10 open reading
           frame 32 protein.
          Length = 105

 Score = 65.7 bits (153), Expect = 2e-10
 Identities = 37/100 (37%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
 Frame = +2

Query: 113 TSASSSSARNLFAES-KQRLAERVQVNMNNISSLARQIQRGSKSNELLTKAAREMASTEH 289
           T    S AR  F +S K  L E+V     ++ +L +Q+ +GS+S+ELL +AAR M   E 
Sbjct: 3   TGTPESQAR--FGQSVKGLLTEKVTTCGTDVIALTKQVLKGSRSSELLGQAARNMVLQED 60

Query: 290 QIETSEENLKKMQLIAVHIGYQFENIHKSAKMLTEINEQI 409
            I  SE++L+KM +I  H+ YQ E I K+ +  +++ +Q+
Sbjct: 61  AILHSEDSLRKMAIITTHLQYQQEAIQKNVEQSSDLQDQL 100


>AL358790-6|CAI52502.1|  105|Homo sapiens chromosome 10 open reading
           frame 32 protein.
          Length = 105

 Score = 65.7 bits (153), Expect = 2e-10
 Identities = 37/100 (37%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
 Frame = +2

Query: 113 TSASSSSARNLFAES-KQRLAERVQVNMNNISSLARQIQRGSKSNELLTKAAREMASTEH 289
           T    S AR  F +S K  L E+V     ++ +L +Q+ +GS+S+ELL +AAR M   E 
Sbjct: 3   TGTPESQAR--FGQSVKGLLTEKVTTCGTDVIALTKQVLKGSRSSELLGQAARNMVLQED 60

Query: 290 QIETSEENLKKMQLIAVHIGYQFENIHKSAKMLTEINEQI 409
            I  SE++L+KM +I  H+ YQ E I K+ +  +++ +Q+
Sbjct: 61  AILHSEDSLRKMAIITTHLQYQQEAIQKNVEQSSDLQDQL 100


>BX284668-3|CAH70057.1| 1898|Homo sapiens ciliary rootlet
           coiled-coil, rootletin protein.
          Length = 1898

 Score = 35.1 bits (77), Expect = 0.28
 Identities = 25/101 (24%), Positives = 47/101 (46%)
 Frame = +2

Query: 119 ASSSSARNLFAESKQRLAERVQVNMNNISSLARQIQRGSKSNELLTKAAREMASTEHQIE 298
           + S S R    E  QRL ++    M       R++QR   +NELL   +RE ++  H ++
Sbjct: 438 SDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELL---SREKSNLAHSLQ 494

Query: 299 TSEENLKKMQLIAVHIGYQFENIHKSAKMLTEINEQITAMQ 421
            +++  ++++     +    E + +    L E  EQ  A+Q
Sbjct: 495 VAQQQAEELRQEREKLQAAQEELRRQRDRLEE--EQEDAVQ 533


>BX284668-2|CAH70055.1| 2017|Homo sapiens ciliary rootlet
           coiled-coil, rootletin protein.
          Length = 2017

 Score = 35.1 bits (77), Expect = 0.28
 Identities = 25/101 (24%), Positives = 47/101 (46%)
 Frame = +2

Query: 119 ASSSSARNLFAESKQRLAERVQVNMNNISSLARQIQRGSKSNELLTKAAREMASTEHQIE 298
           + S S R    E  QRL ++    M       R++QR   +NELL   +RE ++  H ++
Sbjct: 557 SDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELL---SREKSNLAHSLQ 613

Query: 299 TSEENLKKMQLIAVHIGYQFENIHKSAKMLTEINEQITAMQ 421
            +++  ++++     +    E + +    L E  EQ  A+Q
Sbjct: 614 VAQQQAEELRQEREKLQAAQEELRRQRDRLEE--EQEDAVQ 652


>BC126912-1|AAI26913.1| 1132|Homo sapiens CROCC protein protein.
          Length = 1132

 Score = 35.1 bits (77), Expect = 0.28
 Identities = 25/101 (24%), Positives = 47/101 (46%)
 Frame = +2

Query: 119 ASSSSARNLFAESKQRLAERVQVNMNNISSLARQIQRGSKSNELLTKAAREMASTEHQIE 298
           + S S R    E  QRL ++    M       R++QR   +NELL   +RE ++  H ++
Sbjct: 420 SDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELL---SREKSNLAHSLQ 476

Query: 299 TSEENLKKMQLIAVHIGYQFENIHKSAKMLTEINEQITAMQ 421
            +++  ++++     +    E + +    L E  EQ  A+Q
Sbjct: 477 VAQQQAEELRQEREKLQAAQEELRRQRDRLEE--EQEDAVQ 515


>BC126911-1|AAI26912.1| 1132|Homo sapiens CROCC protein protein.
          Length = 1132

 Score = 35.1 bits (77), Expect = 0.28
 Identities = 25/101 (24%), Positives = 47/101 (46%)
 Frame = +2

Query: 119 ASSSSARNLFAESKQRLAERVQVNMNNISSLARQIQRGSKSNELLTKAAREMASTEHQIE 298
           + S S R    E  QRL ++    M       R++QR   +NELL   +RE ++  H ++
Sbjct: 420 SDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELL---SREKSNLAHSLQ 476

Query: 299 TSEENLKKMQLIAVHIGYQFENIHKSAKMLTEINEQITAMQ 421
            +++  ++++     +    E + +    L E  EQ  A+Q
Sbjct: 477 VAQQQAEELRQEREKLQAAQEELRRQRDRLEE--EQEDAVQ 515


>AL049569-4|CAI20365.1| 1898|Homo sapiens ciliary rootlet
           coiled-coil, rootletin protein.
          Length = 1898

 Score = 35.1 bits (77), Expect = 0.28
 Identities = 25/101 (24%), Positives = 47/101 (46%)
 Frame = +2

Query: 119 ASSSSARNLFAESKQRLAERVQVNMNNISSLARQIQRGSKSNELLTKAAREMASTEHQIE 298
           + S S R    E  QRL ++    M       R++QR   +NELL   +RE ++  H ++
Sbjct: 438 SDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELL---SREKSNLAHSLQ 494

Query: 299 TSEENLKKMQLIAVHIGYQFENIHKSAKMLTEINEQITAMQ 421
            +++  ++++     +    E + +    L E  EQ  A+Q
Sbjct: 495 VAQQQAEELRQEREKLQAAQEELRRQRDRLEE--EQEDAVQ 533


>AL049569-3|CAI20363.1| 2017|Homo sapiens ciliary rootlet
           coiled-coil, rootletin protein.
          Length = 2017

 Score = 35.1 bits (77), Expect = 0.28
 Identities = 25/101 (24%), Positives = 47/101 (46%)
 Frame = +2

Query: 119 ASSSSARNLFAESKQRLAERVQVNMNNISSLARQIQRGSKSNELLTKAAREMASTEHQIE 298
           + S S R    E  QRL ++    M       R++QR   +NELL   +RE ++  H ++
Sbjct: 557 SDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELL---SREKSNLAHSLQ 613

Query: 299 TSEENLKKMQLIAVHIGYQFENIHKSAKMLTEINEQITAMQ 421
            +++  ++++     +    E + +    L E  EQ  A+Q
Sbjct: 614 VAQQQAEELRQEREKLQAAQEELRRQRDRLEE--EQEDAVQ 652


>AB007914-1|BAA32290.2| 1919|Homo sapiens KIAA0445 protein protein.
          Length = 1919

 Score = 35.1 bits (77), Expect = 0.28
 Identities = 25/101 (24%), Positives = 47/101 (46%)
 Frame = +2

Query: 119 ASSSSARNLFAESKQRLAERVQVNMNNISSLARQIQRGSKSNELLTKAAREMASTEHQIE 298
           + S S R    E  QRL ++    M       R++QR   +NELL   +RE ++  H ++
Sbjct: 459 SDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELL---SREKSNLAHSLQ 515

Query: 299 TSEENLKKMQLIAVHIGYQFENIHKSAKMLTEINEQITAMQ 421
            +++  ++++     +    E + +    L E  EQ  A+Q
Sbjct: 516 VAQQQAEELRQEREKLQAAQEELRRQRDRLEE--EQEDAVQ 554


>BC033082-1|AAH33082.1|  287|Homo sapiens KIAA1922 protein protein.
          Length = 287

 Score = 33.9 bits (74), Expect = 0.64
 Identities = 18/70 (25%), Positives = 34/70 (48%)
 Frame = +2

Query: 119 ASSSSARNLFAESKQRLAERVQVNMNNISSLARQIQRGSKSNELLTKAAREMASTEHQIE 298
           + S S R    E  QRL ++    M       R++QR   + ELL    RE ++  H ++
Sbjct: 20  SDSESERRALEEQLQRLRDKTDSTMQAHEDAQREVQRLRSAKELL---RREKSNLAHSLQ 76

Query: 299 TSEENLKKMQ 328
            +++  K+++
Sbjct: 77  VAQQQAKELR 86


>AB067509-1|BAB67815.1|  370|Homo sapiens KIAA1922 protein protein.
          Length = 370

 Score = 33.9 bits (74), Expect = 0.64
 Identities = 18/70 (25%), Positives = 34/70 (48%)
 Frame = +2

Query: 119 ASSSSARNLFAESKQRLAERVQVNMNNISSLARQIQRGSKSNELLTKAAREMASTEHQIE 298
           + S S R    E  QRL ++    M       R++QR   + ELL    RE ++  H ++
Sbjct: 103 SDSESERRALEEQLQRLRDKTDSTMQAHEDAQREVQRLRSAKELL---RREKSNLAHSLQ 159

Query: 299 TSEENLKKMQ 328
            +++  K+++
Sbjct: 160 VAQQQAKELR 169


>BC009239-1|AAH09239.1|  723|Homo sapiens leucine rich repeat and
           sterile alpha motif containing 1 protein.
          Length = 723

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
 Frame = +2

Query: 107 KMTSASSSSARNLFAESKQRLAERVQVNMNNISS----LARQIQRGSKSNELLTKAAREM 274
           ++    S   R+L AE +QRL E+++    NISS    L +  QR  KS+E+L     E 
Sbjct: 305 RLEQGLSEHQRHLDAE-RQRLQEQLKQTEQNISSRIQKLLQDNQRQKKSSEILKSLENER 363

Query: 275 ASTEHQIETSEENLKKMQ 328
              E  +  ++E  + ++
Sbjct: 364 IRMEQLMSITQEETESLR 381


>AY358830-1|AAQ89189.1|  723|Homo sapiens leucine-rich protein
           protein.
          Length = 723

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
 Frame = +2

Query: 107 KMTSASSSSARNLFAESKQRLAERVQVNMNNISS----LARQIQRGSKSNELLTKAAREM 274
           ++    S   R+L AE +QRL E+++    NISS    L +  QR  KS+E+L     E 
Sbjct: 305 RLEQGLSEHQRHLNAE-RQRLQEQLKQTEQNISSRIQKLLQDNQRQKKSSEILKSLENER 363

Query: 275 ASTEHQIETSEENLKKMQ 328
              E  +  ++E  + ++
Sbjct: 364 IRMEQLMSITQEETESLR 381


>AL445222-17|CAH72931.1|  696|Homo sapiens leucine rich repeat and
           sterile alpha motif containing 1 protein.
          Length = 696

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
 Frame = +2

Query: 107 KMTSASSSSARNLFAESKQRLAERVQVNMNNISS----LARQIQRGSKSNELLTKAAREM 274
           ++    S   R+L AE +QRL E+++    NISS    L +  QR  KS+E+L     E 
Sbjct: 305 RLEQGLSEHQRHLNAE-RQRLQEQLKQTEQNISSRIQKLLQDNQRQKKSSEILKSLENER 363

Query: 275 ASTEHQIETSEENLKKMQ 328
              E  +  ++E  + ++
Sbjct: 364 IRMEQLMSITQEETESLR 381


>AL445222-16|CAH72930.1|  723|Homo sapiens leucine rich repeat and
           sterile alpha motif containing 1 protein.
          Length = 723

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
 Frame = +2

Query: 107 KMTSASSSSARNLFAESKQRLAERVQVNMNNISS----LARQIQRGSKSNELLTKAAREM 274
           ++    S   R+L AE +QRL E+++    NISS    L +  QR  KS+E+L     E 
Sbjct: 305 RLEQGLSEHQRHLNAE-RQRLQEQLKQTEQNISSRIQKLLQDNQRQKKSSEILKSLENER 363

Query: 275 ASTEHQIETSEENLKKMQ 328
              E  +  ++E  + ++
Sbjct: 364 IRMEQLMSITQEETESLR 381


>AK091589-1|BAC03703.1|  723|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34270 fis, clone FEBRA2003100. ).
          Length = 723

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
 Frame = +2

Query: 107 KMTSASSSSARNLFAESKQRLAERVQVNMNNISS----LARQIQRGSKSNELLTKAAREM 274
           ++    S   R+L AE +QRL E+++    NISS    L +  QR  KS+E+L     E 
Sbjct: 305 RLEQGLSEHQRHLNAE-RQRLQEQLKQTEQNISSRIQKLLQDNQRQKKSSEILKSLENER 363

Query: 275 ASTEHQIETSEENLKKMQ 328
              E  +  ++E  + ++
Sbjct: 364 IRMEQLMSITQEETESLR 381


>AK056203-1|BAB71119.1|  696|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31641 fis, clone NT2RI2003695, weakly similar to
           TRICHOHYALIN. ).
          Length = 696

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
 Frame = +2

Query: 107 KMTSASSSSARNLFAESKQRLAERVQVNMNNISS----LARQIQRGSKSNELLTKAAREM 274
           ++    S   R+L AE +QRL E+++    NISS    L +  QR  KS+E+L     E 
Sbjct: 305 RLEQGLSEHQRHLNAE-RQRLQEQLKQTEQNISSRIQKLLQDNQRQKKSSEILKSLENER 363

Query: 275 ASTEHQIETSEENLKKMQ 328
              E  +  ++E  + ++
Sbjct: 364 IRMEQLMSITQEETESLR 381


>Z99496-4|CAM28258.1|  576|Homo sapiens chromosome 6 open reading
           frame 204 protein.
          Length = 576

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 13/36 (36%), Positives = 25/36 (69%)
 Frame = +2

Query: 140 NLFAESKQRLAERVQVNMNNISSLARQIQRGSKSNE 247
           +LF+E K++L E+++     ISSL ++ Q+ S+ N+
Sbjct: 470 SLFSEEKKKLEEKLKTRDRYISSLKKKCQKESEQNK 505


>Z99496-1|CAI21605.1|  805|Homo sapiens chromosome 6 open reading
           frame 204 protein.
          Length = 805

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 13/36 (36%), Positives = 25/36 (69%)
 Frame = +2

Query: 140 NLFAESKQRLAERVQVNMNNISSLARQIQRGSKSNE 247
           +LF+E K++L E+++     ISSL ++ Q+ S+ N+
Sbjct: 467 SLFSEEKKKLEEKLKTRDRYISSLKKKCQKESEQNK 502


>AL589993-1|CAI16048.1|  805|Homo sapiens chromosome 6 open reading
           frame 204 protein.
          Length = 805

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 13/36 (36%), Positives = 25/36 (69%)
 Frame = +2

Query: 140 NLFAESKQRLAERVQVNMNNISSLARQIQRGSKSNE 247
           +LF+E K++L E+++     ISSL ++ Q+ S+ N+
Sbjct: 467 SLFSEEKKKLEEKLKTRDRYISSLKKKCQKESEQNK 502


>AL390069-4|CAM19612.1|  576|Homo sapiens chromosome 6 open reading
           frame 204 protein.
          Length = 576

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 13/36 (36%), Positives = 25/36 (69%)
 Frame = +2

Query: 140 NLFAESKQRLAERVQVNMNNISSLARQIQRGSKSNE 247
           +LF+E K++L E+++     ISSL ++ Q+ S+ N+
Sbjct: 470 SLFSEEKKKLEEKLKTRDRYISSLKKKCQKESEQNK 505


>AL390069-1|CAI14134.1|  805|Homo sapiens chromosome 6 open reading
           frame 204 protein.
          Length = 805

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 13/36 (36%), Positives = 25/36 (69%)
 Frame = +2

Query: 140 NLFAESKQRLAERVQVNMNNISSLARQIQRGSKSNE 247
           +LF+E K++L E+++     ISSL ++ Q+ S+ N+
Sbjct: 467 SLFSEEKKKLEEKLKTRDRYISSLKKKCQKESEQNK 502


>AF308284-1|AAG48252.1|  546|Homo sapiens serologically defined
           breast cancer antigen NY-BR-15 protein.
          Length = 546

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 13/36 (36%), Positives = 25/36 (69%)
 Frame = +2

Query: 140 NLFAESKQRLAERVQVNMNNISSLARQIQRGSKSNE 247
           +LF+E K++L E+++     ISSL ++ Q+ S+ N+
Sbjct: 208 SLFSEEKKKLEEKLKTRDRYISSLKKKCQKESEQNK 243


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,202,305
Number of Sequences: 237096
Number of extensions: 1665496
Number of successful extensions: 4552
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 4504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4549
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -