Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11h02
         (636 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M60503-1|AAA63243.1| 1084|Homo sapiens profilaggrin protein.           33   0.64 
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr...    31   4.5  
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr...    31   4.5  

>M60503-1|AAA63243.1| 1084|Homo sapiens profilaggrin protein.
          Length = 1084

 Score = 33.5 bits (73), Expect = 0.64
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
 Frame = -3

Query: 460 GDNTDSTITTAVRHQTSTIRREGAFRDHSAQERKLSNHS---QRSFDGVL*RHSNAGRSN 290
           G + DS+  +  RH  ++ RR+ A     A+ R    H    Q+S D    RHS  GR  
Sbjct: 286 GHSADSSXQSGTRHTQTSSRRQAASSQEQARSRAGDRHGSGHQQSADSS--RHSGIGRGQ 343

Query: 289 GRSA-GDSEAASTRCCQVTGSE 227
             +A  DS    +R  Q + +E
Sbjct: 344 ASTAVRDSGHRGSRGSQASDNE 365


>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
            protein.
          Length = 4262

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = -1

Query: 408  PLDGKVPSVTTVPRNGSCPITAKDPSMAFSDVTVMPVGAMGEVLVTVKP 262
            P+D  +P VTT     S P TAKD SM  S  + +   ++  +LV+  P
Sbjct: 2598 PVDTSIP-VTTSTETSSSPTTAKDTSMPISTPSEVST-SLTSILVSTMP 2644


>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
            protein.
          Length = 4493

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = -1

Query: 408  PLDGKVPSVTTVPRNGSCPITAKDPSMAFSDVTVMPVGAMGEVLVTVKP 262
            P+D  +P VTT     S P TAKD SM  S  + +   ++  +LV+  P
Sbjct: 2598 PVDTSIP-VTTSTETSSSPTTAKDTSMPISTPSEVST-SLTSILVSTMP 2644


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,918,298
Number of Sequences: 237096
Number of extensions: 2182857
Number of successful extensions: 10113
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10112
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)