Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11h02
(636 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY094654-1|AAM11007.1| 919|Drosophila melanogaster AT12613p pro... 35 0.080
AE014134-762|AAF50990.2| 919|Drosophila melanogaster CG11929-PA... 35 0.080
EF057960-1|ABL84895.1| 413|Drosophila melanogaster Nup98 protein. 30 2.3
EF057959-1|ABL84894.1| 413|Drosophila melanogaster Nup98 protein. 30 2.3
EF057958-1|ABL84893.1| 413|Drosophila melanogaster Nup98 protein. 30 2.3
EF057957-1|ABL84892.1| 413|Drosophila melanogaster Nup98 protein. 30 2.3
EF057956-1|ABL84891.1| 413|Drosophila melanogaster Nup98 protein. 30 2.3
EF057955-1|ABL84890.1| 413|Drosophila melanogaster Nup98 protein. 30 2.3
EF057954-1|ABL84889.1| 413|Drosophila melanogaster Nup98 protein. 30 2.3
EF057953-1|ABL84888.1| 413|Drosophila melanogaster Nup98 protein. 30 2.3
EF057952-1|ABL84887.1| 413|Drosophila melanogaster Nup98 protein. 30 2.3
EF057951-1|ABL84886.1| 413|Drosophila melanogaster Nup98 protein. 30 2.3
EF057950-1|ABL84885.1| 413|Drosophila melanogaster Nup98 protein. 30 2.3
EF057949-1|ABL84884.1| 413|Drosophila melanogaster Nup98 protein. 30 2.3
EF057948-1|ABL84883.1| 413|Drosophila melanogaster Nup98 protein. 30 2.3
EF057947-1|ABL84882.1| 413|Drosophila melanogaster Nup98 protein. 30 2.3
BT022228-1|AAY54644.1| 529|Drosophila melanogaster IP12458p pro... 30 2.3
BT011076-1|AAR82742.1| 1191|Drosophila melanogaster SD08263p pro... 30 2.3
AE014296-1057|AAF50706.1| 524|Drosophila melanogaster CG6600-PA... 30 2.3
EF057961-1|ABL84896.1| 413|Drosophila melanogaster Nup98 protein. 29 7.0
AE014297-3391|AAF56190.3| 1960|Drosophila melanogaster CG10198-P... 29 7.0
AY118836-1|AAM50696.1| 276|Drosophila melanogaster GM06606p pro... 28 9.2
AY089675-1|AAL90413.1| 276|Drosophila melanogaster RH47057p pro... 28 9.2
AF258617-1|AAF71752.1| 276|Drosophila melanogaster replication-... 28 9.2
AF186594-3|AAG16723.1| 276|Drosophila melanogaster histone mRNA... 28 9.2
AE014297-4343|AAF56867.1| 276|Drosophila melanogaster CG11886-P... 28 9.2
>AY094654-1|AAM11007.1| 919|Drosophila melanogaster AT12613p
protein.
Length = 919
Score = 35.1 bits (77), Expect = 0.080
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -3
Query: 385 RDHSAQERKLSNHSQRSFDGVL*RHSNAGRSNGRSA-GDSEAASTRCCQVTGSE 227
+ +AQE++ SN+SQR+ D + ++ G R G S + RCC+ G E
Sbjct: 438 KPETAQEKQKSNNSQRTTDTPINSENSTGLQCSRECNGSSSKDNRRCCKANGYE 491
>AE014134-762|AAF50990.2| 919|Drosophila melanogaster CG11929-PA
protein.
Length = 919
Score = 35.1 bits (77), Expect = 0.080
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -3
Query: 385 RDHSAQERKLSNHSQRSFDGVL*RHSNAGRSNGRSA-GDSEAASTRCCQVTGSE 227
+ +AQE++ SN+SQR+ D + ++ G R G S + RCC+ G E
Sbjct: 438 KPETAQEKQKSNNSQRTTDTPINSENSTGLQCSRECNGSSSKDNRRCCKANGYE 491
>EF057960-1|ABL84895.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = -3
Query: 418 QTSTIRREGAFRDHSAQERKLSNHSQRSFDGVL*RHSNAGRSNGRSAGDSEAAST 254
Q+STI R F A E LSN S + D R A + A D E+ T
Sbjct: 211 QSSTIARRETFTSQQANESVLSNRSNEAEDSAANRSRLAIEAAAAEAADDESHPT 265
>EF057959-1|ABL84894.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = -3
Query: 418 QTSTIRREGAFRDHSAQERKLSNHSQRSFDGVL*RHSNAGRSNGRSAGDSEAAST 254
Q+STI R F A E LSN S + D R A + A D E+ T
Sbjct: 211 QSSTIARRETFTSQQANESVLSNRSNEAEDSAANRSRLALEAAAAEAADDESHPT 265
>EF057958-1|ABL84893.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = -3
Query: 418 QTSTIRREGAFRDHSAQERKLSNHSQRSFDGVL*RHSNAGRSNGRSAGDSEAAST 254
Q+STI R F A E LSN S + D R A + A D E+ T
Sbjct: 211 QSSTIARRETFTSQQANESVLSNRSNEAEDSAANRSRLALEAAAAEAADDESHPT 265
>EF057957-1|ABL84892.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = -3
Query: 418 QTSTIRREGAFRDHSAQERKLSNHSQRSFDGVL*RHSNAGRSNGRSAGDSEAAST 254
Q+STI R F A E LSN S + D R A + A D E+ T
Sbjct: 211 QSSTIARRETFTSQQANESVLSNRSNEAEDSAANRSRLAIEAAAAEAADDESHPT 265
>EF057956-1|ABL84891.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = -3
Query: 418 QTSTIRREGAFRDHSAQERKLSNHSQRSFDGVL*RHSNAGRSNGRSAGDSEAAST 254
Q+STI R F A E LSN S + D R A + A D E+ T
Sbjct: 211 QSSTITRRETFTSQQANESVLSNRSNEAEDSAANRSRLAIEAAAAEAADDESHPT 265
>EF057955-1|ABL84890.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = -3
Query: 418 QTSTIRREGAFRDHSAQERKLSNHSQRSFDGVL*RHSNAGRSNGRSAGDSEAAST 254
Q+STI R F A E LSN S + D R A + A D E+ T
Sbjct: 211 QSSTIARRETFTSQQANESVLSNRSNEAEDSAANRSRLAIEAAAAEAADDESHPT 265
>EF057954-1|ABL84889.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = -3
Query: 418 QTSTIRREGAFRDHSAQERKLSNHSQRSFDGVL*RHSNAGRSNGRSAGDSEAAST 254
Q+STI R F A E LSN S + D R A + A D E+ T
Sbjct: 211 QSSTIARRETFTSQQANESVLSNRSNEAEDSAANRSRLAIEAAAAEAADDESHPT 265
>EF057953-1|ABL84888.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = -3
Query: 418 QTSTIRREGAFRDHSAQERKLSNHSQRSFDGVL*RHSNAGRSNGRSAGDSEAAST 254
Q+STI R F A E LSN S + D R A + A D E+ T
Sbjct: 211 QSSTIARRETFTSQQANESVLSNRSNEAEDSAANRSRLAIEAAAAEAADDESHPT 265
>EF057952-1|ABL84887.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = -3
Query: 418 QTSTIRREGAFRDHSAQERKLSNHSQRSFDGVL*RHSNAGRSNGRSAGDSEAAST 254
Q+STI R F A E LSN S + D R A + A D E+ T
Sbjct: 211 QSSTIARRETFTSQQANESVLSNRSNEAEDSAANRSRLAIEAAAAEAADDESHPT 265
>EF057951-1|ABL84886.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = -3
Query: 418 QTSTIRREGAFRDHSAQERKLSNHSQRSFDGVL*RHSNAGRSNGRSAGDSEAAST 254
Q+STI R F A E LSN S + D R A + A D E+ T
Sbjct: 211 QSSTIARRETFTSQQANESVLSNRSNEAEDSAANRSRLAIEAAAAEAADDESHPT 265
>EF057950-1|ABL84885.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = -3
Query: 418 QTSTIRREGAFRDHSAQERKLSNHSQRSFDGVL*RHSNAGRSNGRSAGDSEAAST 254
Q+STI R F A E LSN S + D R A + A D E+ T
Sbjct: 211 QSSTIARRETFTSQQANESVLSNRSNEAEDSAANRSRLAIEAAAAEAADDESHPT 265
>EF057949-1|ABL84884.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = -3
Query: 418 QTSTIRREGAFRDHSAQERKLSNHSQRSFDGVL*RHSNAGRSNGRSAGDSEAAST 254
Q+STI R F A E LSN S + D R A + A D E+ T
Sbjct: 211 QSSTIARRETFTSQQANESVLSNRSNEAEDSAANRSRLAIEAAAAEAADDESHPT 265
>EF057948-1|ABL84883.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = -3
Query: 418 QTSTIRREGAFRDHSAQERKLSNHSQRSFDGVL*RHSNAGRSNGRSAGDSEAAST 254
Q+STI R F A E LSN S + D R A + A D E+ T
Sbjct: 211 QSSTIARRETFTSQQANESVLSNRSNEAEDSAANRSRLAIEAAAAEAADDESHPT 265
>EF057947-1|ABL84882.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = -3
Query: 418 QTSTIRREGAFRDHSAQERKLSNHSQRSFDGVL*RHSNAGRSNGRSAGDSEAAST 254
Q+STI R F A E LSN S + D R A + A D E+ T
Sbjct: 211 QSSTIARRETFTSQQANESVLSNRSNEAEDSAANRSRLAIEAAAAEAADDESHPT 265
>BT022228-1|AAY54644.1| 529|Drosophila melanogaster IP12458p
protein.
Length = 529
Score = 30.3 bits (65), Expect = 2.3
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 341 LAVIGQLPFLGTVVTEGTFPSNGRGLVSYGCGDGAIGIVSE 463
LA++ P L + T P + R LVS G D A+GI+ +
Sbjct: 188 LAIVTSAPLLLAIFTPFVVPESARWLVSQGKVDKAVGILKK 228
>BT011076-1|AAR82742.1| 1191|Drosophila melanogaster SD08263p
protein.
Length = 1191
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = -3
Query: 418 QTSTIRREGAFRDHSAQERKLSNHSQRSFDGVL*RHSNAGRSNGRSAGDSEAAST 254
Q+STI R F A E LSN S + D R A + A D E+ T
Sbjct: 57 QSSTIARRETFTSQQANESVLSNRSNEAEDSAANRSRLAIEAAAAEAADDESHPT 111
>AE014296-1057|AAF50706.1| 524|Drosophila melanogaster CG6600-PA
protein.
Length = 524
Score = 30.3 bits (65), Expect = 2.3
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 341 LAVIGQLPFLGTVVTEGTFPSNGRGLVSYGCGDGAIGIVSE 463
LA++ P L + T P + R LVS G D A+GI+ +
Sbjct: 183 LAIVTSAPLLLAIFTPFVVPESARWLVSQGKVDKAVGILKK 223
>EF057961-1|ABL84896.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 28.7 bits (61), Expect = 7.0
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = -3
Query: 418 QTSTIRREGAFRDHSAQERKLSNHSQRSFDGVL*RHSNAGRSNGRSAGDSEAAST 254
Q+STI R F A E LSN S + D + A + A D E+ T
Sbjct: 211 QSSTIARRETFTSQQANESVLSNRSNEAEDSAANQSRLAIEAAAAEAADDESHPT 265
>AE014297-3391|AAF56190.3| 1960|Drosophila melanogaster CG10198-PA
protein.
Length = 1960
Score = 28.7 bits (61), Expect = 7.0
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = -3
Query: 418 QTSTIRREGAFRDHSAQERKLSNHSQRSFDGVL*RHSNAGRSNGRSAGDSEAAST 254
Q+STI R F A E LSN S + D + A + A D E+ T
Sbjct: 826 QSSTIARRETFTSQQANESVLSNRSNEAEDSAANQSRLAIEAAAAEAADDESHPT 880
>AY118836-1|AAM50696.1| 276|Drosophila melanogaster GM06606p
protein.
Length = 276
Score = 28.3 bits (60), Expect = 9.2
Identities = 16/61 (26%), Positives = 25/61 (40%)
Frame = -3
Query: 502 SRTDGRPWSCHRRLGDNTDSTITTAVRHQTSTIRREGAFRDHSAQERKLSNHSQRSFDGV 323
S T+ P RR T A + ++ RDH K +S+R+FDG+
Sbjct: 186 SYTEADPAILSRRQKQIDYGKNTAAYERYVEMVPKDERTRDHPRTPNKYGKYSRRAFDGL 245
Query: 322 L 320
+
Sbjct: 246 V 246
>AY089675-1|AAL90413.1| 276|Drosophila melanogaster RH47057p
protein.
Length = 276
Score = 28.3 bits (60), Expect = 9.2
Identities = 16/61 (26%), Positives = 25/61 (40%)
Frame = -3
Query: 502 SRTDGRPWSCHRRLGDNTDSTITTAVRHQTSTIRREGAFRDHSAQERKLSNHSQRSFDGV 323
S T+ P RR T A + ++ RDH K +S+R+FDG+
Sbjct: 186 SYTEADPAILSRRQKQIDYGKNTAAYERYVEMVPKDERTRDHPRTPNKYGKYSRRAFDGL 245
Query: 322 L 320
+
Sbjct: 246 V 246
>AF258617-1|AAF71752.1| 276|Drosophila melanogaster
replication-associated histonemRNA stem loop-binding
protein protein.
Length = 276
Score = 28.3 bits (60), Expect = 9.2
Identities = 16/61 (26%), Positives = 25/61 (40%)
Frame = -3
Query: 502 SRTDGRPWSCHRRLGDNTDSTITTAVRHQTSTIRREGAFRDHSAQERKLSNHSQRSFDGV 323
S T+ P RR T A + ++ RDH K +S+R+FDG+
Sbjct: 186 SYTEADPAILSRRQKQIDYGKNTAAYERYVEMVPKDERTRDHPRTPNKYGKYSRRAFDGL 245
Query: 322 L 320
+
Sbjct: 246 V 246
>AF186594-3|AAG16723.1| 276|Drosophila melanogaster histone mRNA
stem-loop bindingprotein protein.
Length = 276
Score = 28.3 bits (60), Expect = 9.2
Identities = 16/61 (26%), Positives = 25/61 (40%)
Frame = -3
Query: 502 SRTDGRPWSCHRRLGDNTDSTITTAVRHQTSTIRREGAFRDHSAQERKLSNHSQRSFDGV 323
S T+ P RR T A + ++ RDH K +S+R+FDG+
Sbjct: 186 SYTEADPAILSRRQKQIDYGKNTAAYERYVEMVPKDERTRDHPRTPNKYGKYSRRAFDGL 245
Query: 322 L 320
+
Sbjct: 246 V 246
>AE014297-4343|AAF56867.1| 276|Drosophila melanogaster CG11886-PA
protein.
Length = 276
Score = 28.3 bits (60), Expect = 9.2
Identities = 16/61 (26%), Positives = 25/61 (40%)
Frame = -3
Query: 502 SRTDGRPWSCHRRLGDNTDSTITTAVRHQTSTIRREGAFRDHSAQERKLSNHSQRSFDGV 323
S T+ P RR T A + ++ RDH K +S+R+FDG+
Sbjct: 186 SYTEADPAILSRRQKQIDYGKNTAAYERYVEMVPKDERTRDHPRTPNKYGKYSRRAFDGL 245
Query: 322 L 320
+
Sbjct: 246 V 246
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,140,238
Number of Sequences: 53049
Number of extensions: 627948
Number of successful extensions: 2028
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2026
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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