Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11h02
         (636 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z54235-3|CAA90973.2|  288|Caenorhabditis elegans Hypothetical pr...    29   2.8  
U61952-4|AAK84529.1|  267|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z92825-7|CAB07317.1|  487|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z81041-15|CAB02792.1|  487|Caenorhabditis elegans Hypothetical p...    28   4.9  
AL132846-5|CAJ76972.1|  377|Caenorhabditis elegans Hypothetical ...    28   4.9  
Z99279-6|CAB16498.1|  640|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z82284-8|CAB05294.1|  640|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z68008-6|CAA92001.1|  362|Caenorhabditis elegans Hypothetical pr...    27   8.5  
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.       27   8.5  
AY724774-1|AAU21474.1|  750|Caenorhabditis elegans UNC-89-B prot...    27   8.5  
AL023828-14|CAA19458.1|  269|Caenorhabditis elegans Hypothetical...    27   8.5  
AF026205-6|AAM69068.1|  908|Caenorhabditis elegans Hypothetical ...    27   8.5  
AF026205-5|AAB71258.1|  880|Caenorhabditis elegans Hypothetical ...    27   8.5  
AF026205-4|AAD47129.1|  885|Caenorhabditis elegans Hypothetical ...    27   8.5  
AF026205-3|AAB71257.1|  930|Caenorhabditis elegans Hypothetical ...    27   8.5  
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated...    27   8.5  
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated...    27   8.5  
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated...    27   8.5  
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated...    27   8.5  
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated...    27   8.5  

>Z54235-3|CAA90973.2|  288|Caenorhabditis elegans Hypothetical
           protein C09G9.3 protein.
          Length = 288

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 18/47 (38%), Positives = 25/47 (53%)
 Frame = -1

Query: 393 VPSVTTVPRNGSCPITAKDPSMAFSDVTVMPVGAMGEVLVTVKPPPH 253
           +PS T  P  GS   T  DP++  +  TV+P G  GEV+    P P+
Sbjct: 68  IPSTTPSP-TGS---TTTDPTVT-TTTTVVPTGCCGEVIYLPTPRPN 109


>U61952-4|AAK84529.1|  267|Caenorhabditis elegans Hypothetical
           protein F42A9.7 protein.
          Length = 267

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
 Frame = -3

Query: 439 ITTAVRHQTSTIRREGAFR--DHSAQERKLSNHSQRSFDGVL*RHSNAGRSNGRSAGDSE 266
           + + + +Q +T +R    R    S + RK S  S+R  +G   + S +G+S+  S     
Sbjct: 14  LPSTLLYQCATAKRPANQRKSQRSTKSRKSSRRSRRR-NGRSRKSSRSGKSSRSSKSGRS 72

Query: 265 AASTRCCQVTGSETNES 215
           + S+   + TGS++++S
Sbjct: 73  SKSSNSTKTTGSKSSKS 89


>Z92825-7|CAB07317.1|  487|Caenorhabditis elegans Hypothetical
           protein C27A7.6 protein.
          Length = 487

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +2

Query: 260 GGFTVTSTSPIAPTGITVTSENAIEGSLAVIGQLPFL 370
           GG  +T    I   G+  T+ N I  S+ +I  +PF+
Sbjct: 96  GGMYITDNKGIKTAGLLGTTLNVIGASIRMIASIPFI 132


>Z81041-15|CAB02792.1|  487|Caenorhabditis elegans Hypothetical
           protein C27A7.6 protein.
          Length = 487

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +2

Query: 260 GGFTVTSTSPIAPTGITVTSENAIEGSLAVIGQLPFL 370
           GG  +T    I   G+  T+ N I  S+ +I  +PF+
Sbjct: 96  GGMYITDNKGIKTAGLLGTTLNVIGASIRMIASIPFI 132


>AL132846-5|CAJ76972.1|  377|Caenorhabditis elegans Hypothetical
           protein Y43D4A.3a protein.
          Length = 377

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +2

Query: 260 GGFTVTSTSPIAPTGITVTSENAIEGSLAVIGQLPFL 370
           GG  +T    I   G+  T+ N I  S+ +I  +PF+
Sbjct: 83  GGMYITDNKGIKTAGLLGTTLNVIGASIRMIASIPFI 119


>Z99279-6|CAB16498.1|  640|Caenorhabditis elegans Hypothetical
           protein Y57G11A.2 protein.
          Length = 640

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
 Frame = -1

Query: 465 VSETIPIAPSPQP*DTRPLPLDGKVPSVTTVPRNGSCPITAKD-----PSMAFSDVTVMP 301
           V+E IP  P P   +  P P D ++ S T  P  G  P +  +      SM   +V V  
Sbjct: 540 VTEEIPEVPEPT--EEPPTPTDSEIDSPTPAPAPGPEPESPSNYHRLSISMDELEVLVQQ 597

Query: 300 VGAMGEVLVTVKPPPH 253
             A   +++T+  P H
Sbjct: 598 AVAGQNMVITLPVPAH 613


>Z82284-8|CAB05294.1|  640|Caenorhabditis elegans Hypothetical
           protein Y57G11A.2 protein.
          Length = 640

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
 Frame = -1

Query: 465 VSETIPIAPSPQP*DTRPLPLDGKVPSVTTVPRNGSCPITAKD-----PSMAFSDVTVMP 301
           V+E IP  P P   +  P P D ++ S T  P  G  P +  +      SM   +V V  
Sbjct: 540 VTEEIPEVPEPT--EEPPTPTDSEIDSPTPAPAPGPEPESPSNYHRLSISMDELEVLVQQ 597

Query: 300 VGAMGEVLVTVKPPPH 253
             A   +++T+  P H
Sbjct: 598 AVAGQNMVITLPVPAH 613


>Z68008-6|CAA92001.1|  362|Caenorhabditis elegans Hypothetical
           protein R08B4.2 protein.
          Length = 362

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +2

Query: 272 VTSTSPIAPTGITVTSENA 328
           VT++SPI PT +T T +NA
Sbjct: 241 VTTSSPILPTSVTPTFQNA 259


>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
          Length = 6632

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 560  PDRCPYIRSRPGGSLDHNLVPDRRAPLELP 471
            PDR P+I+   G  L  + +P +RAP   P
Sbjct: 6278 PDRGPFIKEVTGHYLTLSWIPTKRAPPRYP 6307


>AY724774-1|AAU21474.1|  750|Caenorhabditis elegans UNC-89-B
           protein.
          Length = 750

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 560 PDRCPYIRSRPGGSLDHNLVPDRRAPLELP 471
           PDR P+I+   G  L  + +P +RAP   P
Sbjct: 357 PDRGPFIKEVTGHYLTLSWIPTKRAPPRYP 386


>AL023828-14|CAA19458.1|  269|Caenorhabditis elegans Hypothetical
           protein Y17G7B.12 protein.
          Length = 269

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = -1

Query: 135 RPPISGSRPRY*LAALTHNNAETLTKIAVLAAILFGHYTRNNTRI 1
           R  +SG RP   + A+  + A+T     +   I+ GH   N+ R+
Sbjct: 149 RTAVSGIRPENMIKAIPFDRAQTEVSKLIDGRIVIGHAVHNDFRV 193


>AF026205-6|AAM69068.1|  908|Caenorhabditis elegans Hypothetical
           protein T23E7.2e protein.
          Length = 908

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 17/59 (28%), Positives = 22/59 (37%)
 Frame = -1

Query: 420 TRPLPLDGKVPSVTTVPRNGSCPITAKDPSMAFSDVTVMPVGAMGEVLVTVKPPPHDAA 244
           T P P   K P     PR    P T K P++   +    PV    E +   +P P   A
Sbjct: 462 TTPAPKTPKTPKTPRTPRTPKTPRTPKTPAVV--EPEPEPVAEEPEPVAEPEPEPEPVA 518


>AF026205-5|AAB71258.1|  880|Caenorhabditis elegans Hypothetical
           protein T23E7.2b protein.
          Length = 880

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 17/59 (28%), Positives = 22/59 (37%)
 Frame = -1

Query: 420 TRPLPLDGKVPSVTTVPRNGSCPITAKDPSMAFSDVTVMPVGAMGEVLVTVKPPPHDAA 244
           T P P   K P     PR    P T K P++   +    PV    E +   +P P   A
Sbjct: 412 TTPAPKTPKTPKTPRTPRTPKTPRTPKTPAVV--EPEPEPVAEEPEPVAEPEPEPEPVA 468


>AF026205-4|AAD47129.1|  885|Caenorhabditis elegans Hypothetical
           protein T23E7.2c protein.
          Length = 885

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 17/59 (28%), Positives = 22/59 (37%)
 Frame = -1

Query: 420 TRPLPLDGKVPSVTTVPRNGSCPITAKDPSMAFSDVTVMPVGAMGEVLVTVKPPPHDAA 244
           T P P   K P     PR    P T K P++   +    PV    E +   +P P   A
Sbjct: 462 TTPAPKTPKTPKTPRTPRTPKTPRTPKTPAVV--EPEPEPVAEEPEPVAEPEPEPEPVA 518


>AF026205-3|AAB71257.1|  930|Caenorhabditis elegans Hypothetical
           protein T23E7.2a protein.
          Length = 930

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 17/59 (28%), Positives = 22/59 (37%)
 Frame = -1

Query: 420 TRPLPLDGKVPSVTTVPRNGSCPITAKDPSMAFSDVTVMPVGAMGEVLVTVKPPPHDAA 244
           T P P   K P     PR    P T K P++   +    PV    E +   +P P   A
Sbjct: 462 TTPAPKTPKTPKTPRTPRTPKTPRTPKTPAVV--EPEPEPVAEEPEPVAEPEPEPEPVA 518


>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
            protein 89, isoform e protein.
          Length = 5992

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 560  PDRCPYIRSRPGGSLDHNLVPDRRAPLELP 471
            PDR P+I+   G  L  + +P +RAP   P
Sbjct: 5638 PDRGPFIKEVTGHYLTLSWIPTKRAPPRYP 5667


>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
            protein 89, isoform a protein.
          Length = 6632

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 560  PDRCPYIRSRPGGSLDHNLVPDRRAPLELP 471
            PDR P+I+   G  L  + +P +RAP   P
Sbjct: 6278 PDRGPFIKEVTGHYLTLSWIPTKRAPPRYP 6307


>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
            protein 89, isoform g protein.
          Length = 7122

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 560  PDRCPYIRSRPGGSLDHNLVPDRRAPLELP 471
            PDR P+I+   G  L  + +P +RAP   P
Sbjct: 6278 PDRGPFIKEVTGHYLTLSWIPTKRAPPRYP 6307


>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
            protein 89, isoform f protein.
          Length = 7441

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 560  PDRCPYIRSRPGGSLDHNLVPDRRAPLELP 471
            PDR P+I+   G  L  + +P +RAP   P
Sbjct: 5638 PDRGPFIKEVTGHYLTLSWIPTKRAPPRYP 5667


>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
            protein 89, isoform b protein.
          Length = 8081

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 560  PDRCPYIRSRPGGSLDHNLVPDRRAPLELP 471
            PDR P+I+   G  L  + +P +RAP   P
Sbjct: 6278 PDRGPFIKEVTGHYLTLSWIPTKRAPPRYP 6307


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,341,739
Number of Sequences: 27780
Number of extensions: 296726
Number of successful extensions: 848
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 848
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)