Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11h01
(697 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC000891-1|AAH00891.1| 296|Homo sapiens mitochondrial ribosomal... 261 2e-69
CR533531-1|CAG38562.1| 296|Homo sapiens MRPL15 protein. 259 6e-69
AF110377-1|AAD04629.1| 3859|Homo sapiens PCAF-associated factor ... 32 1.7
AF076974-1|AAD09420.1| 3830|Homo sapiens TRRAP protein protein. 32 1.7
AC004991-1|AAC27675.2| 2089|Homo sapiens unknown protein. 32 1.7
D80007-1|BAA11502.1| 1884|Homo sapiens KIAA0185 protein. 31 5.2
BC080560-1|AAH80560.1| 1434|Homo sapiens PDCD11 protein protein. 31 5.2
BC064486-1|AAH64486.1| 1434|Homo sapiens PDCD11 protein protein. 31 5.2
U30246-1|AAC50561.1| 1212|Homo sapiens bumetanide-sensitive Na-K... 30 6.9
BC033003-1|AAH33003.1| 1150|Homo sapiens SLC12A2 protein protein. 30 6.9
AY280459-1|AAP33906.1| 1212|Homo sapiens bumetanide-sensitive Na... 30 6.9
>BC000891-1|AAH00891.1| 296|Homo sapiens mitochondrial ribosomal
protein L15 protein.
Length = 296
Score = 261 bits (639), Expect = 2e-69
Identities = 122/230 (53%), Positives = 160/230 (69%)
Frame = +3
Query: 3 LSMLRSLPRITLANIRDNPGSKITQKRGRGQHGGDKHGAGNKGSGQRQNYMRLGYETGNN 182
L +LR LPR++LAN++ NPGSK ++R RG+ G K G G+KG QR RLG+E G
Sbjct: 13 LDLLRGLPRVSLANLKPNPGSKKPERRPRGRRRGRKCGRGHKGERQRGTRPRLGFEGGQT 72
Query: 183 PFYLRIPHENYYRGHHLKREYPPMTLLELQKLIDRNRVDISKPIDIASLIKSGLYTLNPD 362
PFY+RIP + GH +R+Y P++L LQ LID RVD S+PID+ L+ T+ P
Sbjct: 73 PFYIRIPKYGFNEGHSFRRQYKPLSLNRLQYLIDLGRVDPSQPIDLTQLVNGRGVTIQPL 132
Query: 363 QKHFGVNLTDDGADIFAAKINIEVQWASEQVIAAIEKNGGVITTAYYDPHSLFILKNPQR 542
++ +GV L ++GAD F AK+NIEVQ ASE IAAIEKNGGV+TTA+YDP SL I+ P
Sbjct: 133 KRDYGVQLVEEGADTFTAKVNIEVQLASELAIAAIEKNGGVVTTAFYDPRSLDIVCKPVP 192
Query: 543 FFETGQAIPRRMIPPPDAIEFYTSAATRGYLADPEKISQERLKLSQKYGY 692
FF GQ IP+RM+PP + + +YT A RGYLADP K + RL+L++KYGY
Sbjct: 193 FFLRGQPIPKRMLPPEELVPYYTDAKNRGYLADPAKFPEARLELARKYGY 242
>CR533531-1|CAG38562.1| 296|Homo sapiens MRPL15 protein.
Length = 296
Score = 259 bits (635), Expect = 6e-69
Identities = 122/230 (53%), Positives = 159/230 (69%)
Frame = +3
Query: 3 LSMLRSLPRITLANIRDNPGSKITQKRGRGQHGGDKHGAGNKGSGQRQNYMRLGYETGNN 182
L +LR LPR++LAN++ NPGSK ++R RG+ G K G G+KG QR RLG+E G
Sbjct: 13 LDLLRGLPRVSLANLKPNPGSKKPERRPRGRRRGRKCGRGHKGERQRGTRPRLGFEGGQT 72
Query: 183 PFYLRIPHENYYRGHHLKREYPPMTLLELQKLIDRNRVDISKPIDIASLIKSGLYTLNPD 362
PFY+RIP + GH +R+Y PM+L LQ LID RVD S+PID+ L+ T+ P
Sbjct: 73 PFYIRIPKYGFNEGHSFRRQYKPMSLNRLQYLIDLGRVDPSQPIDLTQLVNGRGVTIQPL 132
Query: 363 QKHFGVNLTDDGADIFAAKINIEVQWASEQVIAAIEKNGGVITTAYYDPHSLFILKNPQR 542
++ + V L ++GAD F AK+NIEVQ ASE IAAIEKNGGV+TTA+YDP SL I+ P
Sbjct: 133 KRDYDVQLVEEGADTFTAKVNIEVQLASELAIAAIEKNGGVVTTAFYDPRSLDIVCKPVP 192
Query: 543 FFETGQAIPRRMIPPPDAIEFYTSAATRGYLADPEKISQERLKLSQKYGY 692
FF GQ IP+RM+PP + + +YT A RGYLADP K + RL+L++KYGY
Sbjct: 193 FFLRGQPIPKRMLPPEELVPYYTDAKNRGYLADPAKFPEARLELARKYGY 242
>AF110377-1|AAD04629.1| 3859|Homo sapiens PCAF-associated factor 400
protein.
Length = 3859
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 540 RFFETGQAIPRRMIPPPDAIEFYTSAATRGYLADPEKISQE 662
R+FE Q IP +PPP+ + T+ A + +PE+ E
Sbjct: 171 RYFENPQVIPENTVPPPEMVGMITTIAVK---VNPEREDSE 208
>AF076974-1|AAD09420.1| 3830|Homo sapiens TRRAP protein protein.
Length = 3830
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 540 RFFETGQAIPRRMIPPPDAIEFYTSAATRGYLADPEKISQE 662
R+FE Q IP +PPP+ + T+ A + +PE+ E
Sbjct: 171 RYFENPQVIPENTVPPPEMVGMITTIAVK---VNPEREDSE 208
>AC004991-1|AAC27675.2| 2089|Homo sapiens unknown protein.
Length = 2089
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 540 RFFETGQAIPRRMIPPPDAIEFYTSAATRGYLADPEKISQE 662
R+FE Q IP +PPP+ + T+ A + +PE+ E
Sbjct: 171 RYFENPQVIPENTVPPPEMVGMITTIAVK---VNPEREDSE 208
>D80007-1|BAA11502.1| 1884|Homo sapiens KIAA0185 protein.
Length = 1884
Score = 30.7 bits (66), Expect = 5.2
Identities = 21/97 (21%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +3
Query: 408 FAAKINIEVQWASEQVIAAIEKNGGVITTAYYDPHSLFILKNPQRFFETGQAIPRRMIPP 587
F K N+ +W ++ I ++ T+ S +LK+P + F GQA+ ++ P
Sbjct: 1168 FLKKYNVVKKWLEVEIAPDIRGRIPLLLTSL----SFKVLKHPDKKFRVGQALRATVVGP 1223
Query: 588 PDAIEFYTSAATRGYLADPEKISQER-LKLSQKYGYT 695
+ F + T + + +++ R +K++ G T
Sbjct: 1224 DSSKTFLCLSLTGPHKLEEGEVAMGRVVKVTPNEGLT 1260
>BC080560-1|AAH80560.1| 1434|Homo sapiens PDCD11 protein protein.
Length = 1434
Score = 30.7 bits (66), Expect = 5.2
Identities = 21/97 (21%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +3
Query: 408 FAAKINIEVQWASEQVIAAIEKNGGVITTAYYDPHSLFILKNPQRFFETGQAIPRRMIPP 587
F K N+ +W ++ I ++ T+ S +LK+P + F GQA+ ++ P
Sbjct: 1155 FLKKYNVVKKWLEVEIAPDIRGRIPLLLTSL----SFKVLKHPDKKFRVGQALRATVVGP 1210
Query: 588 PDAIEFYTSAATRGYLADPEKISQER-LKLSQKYGYT 695
+ F + T + + +++ R +K++ G T
Sbjct: 1211 DSSKTFLCLSLTGPHKLEEGEVAMGRVVKVTPNEGLT 1247
>BC064486-1|AAH64486.1| 1434|Homo sapiens PDCD11 protein protein.
Length = 1434
Score = 30.7 bits (66), Expect = 5.2
Identities = 21/97 (21%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +3
Query: 408 FAAKINIEVQWASEQVIAAIEKNGGVITTAYYDPHSLFILKNPQRFFETGQAIPRRMIPP 587
F K N+ +W ++ I ++ T+ S +LK+P + F GQA+ ++ P
Sbjct: 1155 FLKKYNVVKKWLEVEIAPDIRGRIPLLLTSL----SFKVLKHPDKKFRVGQALRATVVGP 1210
Query: 588 PDAIEFYTSAATRGYLADPEKISQER-LKLSQKYGYT 695
+ F + T + + +++ R +K++ G T
Sbjct: 1211 DSSKTFLCLSLTGPHKLEEGEVAMGRVVKVTPNEGLT 1247
>U30246-1|AAC50561.1| 1212|Homo sapiens bumetanide-sensitive Na-K-Cl
cotransporter protein.
Length = 1212
Score = 30.3 bits (65), Expect = 6.9
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 99 GGDKHGAGNKGSGQRQNYMRLGYETGNNPFYLR 197
G H G GSG Q+Y Y+T N +YLR
Sbjct: 182 GSSLHSGGGGGSGHHQHYY---YDTHTNTYYLR 211
>BC033003-1|AAH33003.1| 1150|Homo sapiens SLC12A2 protein protein.
Length = 1150
Score = 30.3 bits (65), Expect = 6.9
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 99 GGDKHGAGNKGSGQRQNYMRLGYETGNNPFYLR 197
G H G GSG Q+Y Y+T N +YLR
Sbjct: 182 GSSLHSGGGGGSGHHQHYY---YDTHTNTYYLR 211
>AY280459-1|AAP33906.1| 1212|Homo sapiens bumetanide-sensitive
Na-K-Cl cotransporter protein.
Length = 1212
Score = 30.3 bits (65), Expect = 6.9
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 99 GGDKHGAGNKGSGQRQNYMRLGYETGNNPFYLR 197
G H G GSG Q+Y Y+T N +YLR
Sbjct: 182 GSSLHSGGGGGSGHHQHYY---YDTHTNTYYLR 211
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,266,514
Number of Sequences: 237096
Number of extensions: 2187035
Number of successful extensions: 5121
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5113
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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