Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11g24
(725 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyce... 29 0.68
SPAC57A10.11c |tim40||TIM22 inner membrane protein import comple... 28 1.2
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 28 1.2
SPAC821.07c |moc3||transcription factor Moc3|Schizosaccharomyces... 28 1.6
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 28 1.6
SPAC631.02 |||bromodomain protein|Schizosaccharomyces pombe|chr ... 27 2.1
SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr ... 27 2.7
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 3.6
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 27 3.6
SPCC4B3.15 |mid1|dmf1|medial ring protein Mid1|Schizosaccharomyc... 27 3.6
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 26 4.8
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 26 4.8
SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|ch... 26 6.3
SPBP8B7.30c |thi5||transcription factor Thi5|Schizosaccharomyces... 26 6.3
SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces ... 26 6.3
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 26 6.3
SPCC1795.09 |yps1||aspartic protease Yps1|Schizosaccharomyces po... 25 8.3
SPBC16A3.18 |cip1||RNA-binding protein Cip1|Schizosaccharomyces ... 25 8.3
SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomy... 25 8.3
SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces pombe... 25 8.3
SPCC1223.13 |cbf12||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Ma... 25 8.3
>SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 29.1 bits (62), Expect = 0.68
Identities = 19/73 (26%), Positives = 28/73 (38%)
Frame = +3
Query: 228 LPATAASQKHETAFPSPFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYA 407
LP AA+ E +P +P + + + + VPM PN+ T
Sbjct: 170 LPLFAATHPFERRYPPSLLHQFPSSKDIKNETPTIDRCDFPNYVPMFAFPNDITIKESDV 229
Query: 408 LPVSAFPSQASES 446
PVS + S A S
Sbjct: 230 RPVSTYHSFALTS 242
>SPAC57A10.11c |tim40||TIM22 inner membrane protein import complex
subunit Tim40|Schizosaccharomyces pombe|chr 1|||Manual
Length = 313
Score = 28.3 bits (60), Expect = 1.2
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 210 DASVNFLPATAASQKHETAFPSPFAASYPHEETVNKKKQ 326
DA N P+T + + ++ P AS P E+ +N +K+
Sbjct: 262 DAETNEKPSTTSDENNQPQSPPSDNASNPEEDVMNMEKE 300
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 28.3 bits (60), Expect = 1.2
Identities = 24/102 (23%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Frame = +3
Query: 147 STGDLYVAATEEDGVKSQWLTDASVNFLPATAA--SQKHETAFPSPFAASYPHEETVNKK 320
STG V + +DG + T ++ + + T+A + T++P+ F ++ +
Sbjct: 64 STGLASVTESSDDGASTALPTTSTESVVVTTSAPAASSSATSYPATFVST-----PLYTM 118
Query: 321 KQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSAFPSQASES 446
APV +VP++T TS + +++P+ +SES
Sbjct: 119 DNVTAPVWSNTSVPVSTPETSATSSSEF---FTSYPATSSES 157
>SPAC821.07c |moc3||transcription factor Moc3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 497
Score = 27.9 bits (59), Expect = 1.6
Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 5/112 (4%)
Frame = +3
Query: 135 SVDGSTGDLYVAATEED-GVKSQWLTDASVNFLPATAASQKHETAFP-SPFAASYPHEET 308
S TGD + +++ + +S N T Q H+ F ++Y +
Sbjct: 100 SSSAQTGDTFSGSSQSNFNTNDLNQMTSSSNLSTVTPIKQDHQKPMNLQGFPSAYQQHQY 159
Query: 309 VNKKKQAGAPVQYAYAVPMTTAPNE---GTSPYPYALPVSAFPSQASESLIP 455
+ P + + +T P+ G + YP+ VS FPS + L P
Sbjct: 160 LQSNHNV--PTNNSSSATSSTKPSVQSVGQASYPFLSSVSNFPSNFNSELFP 209
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 27.9 bits (59), Expect = 1.6
Identities = 25/115 (21%), Positives = 47/115 (40%)
Frame = +3
Query: 231 PATAASQKHETAFPSPFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYAL 410
P T ++ K E ++ EETV + K+ PV+ ++ P +SP ++
Sbjct: 455 PTTPSASKVEEPSKKRDEDNHQKEETVTQPKREKTPVEKSF-------PKPASSPVTFSE 507
Query: 411 PVSAFPSQASESLIPCLDPAKANIPQYSPFHFFYPQMMSAYTKSMSILKEAGVNE 575
V PS+ + + P A + + P +S K +S + A +N+
Sbjct: 508 DVKKEPSEEKKLEVSDEAPKAAPLAESKKVEEKEPFYVSKDKKDISAVNLADLNK 562
>SPAC631.02 |||bromodomain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 727
Score = 27.5 bits (58), Expect = 2.1
Identities = 30/95 (31%), Positives = 42/95 (44%)
Frame = +3
Query: 207 TDASVNFLPATAASQKHETAFPSPFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEG 386
++AS + P+ A TA S S PH+ETV KK+ QY PMT ++
Sbjct: 184 SEASESASPS-ALQALDSTAAGSSKEHSSPHDETV--KKEENDKDQYP---PMTKEQHK- 236
Query: 387 TSPYPYALPVSAFPSQASESLIPCLDPAKANIPQY 491
Y +A+ + S +DP K NIP Y
Sbjct: 237 ---YIHAMLRQLRRGRDSIPFRAPVDPVKQNIPDY 268
>SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1854
Score = 27.1 bits (57), Expect = 2.7
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -1
Query: 368 CHWHRICVLDRGSSLFFFVHSFF--MRIACSEGARKCSFVFL 249
C+ ICV G S ++F HSF+ + + G+ C+ L
Sbjct: 1310 CYTINICVKVYGLSFYYFFHSFWNMFDVVVTLGSLTCNIAIL 1351
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 26.6 bits (56), Expect = 3.6
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Frame = +3
Query: 330 GAPVQYAYAVPMTTAPNEGTSPYPYALPVSAFPSQASESLIPC---LDPAKANIPQYSPF 500
G P Y YA P T+ +E P SA PS+ + P DPA + +P S
Sbjct: 68 GTPTYYGYATP--TSSSE-----PSIFSESATPSETNSYSSPVSSYSDPATSQLP--SST 118
Query: 501 HFFYP---QMMSAYTKSMSILKEAGVN 572
FF P + + T+S S+L + V+
Sbjct: 119 SFFSPTSSEYTPSSTESSSLLDPSSVS 145
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 26.6 bits (56), Expect = 3.6
Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 7/107 (6%)
Frame = +3
Query: 132 PSVDGSTGD--LYVAATEEDGVKSQWLTDASVNFLPATAASQKHETAFPSPFA-ASYPHE 302
PSV +T L ++ S+ +SV +S H +A P +SY
Sbjct: 432 PSVSNNTQSSFLIISTFTSSYEHSEPFKVSSVPLTSNNFSSISHSSASSLPITPSSYLSN 491
Query: 303 ETVNKKKQAGAPVQYAYAVPMTT----APNEGTSPYPYALPVSAFPS 431
T++ Q+ Q+ +VP +T + T+P + +S+FP+
Sbjct: 492 TTLHSSVQSSQSSQFTVSVPSSTQSYSTSSNFTTPITISTSLSSFPT 538
>SPCC4B3.15 |mid1|dmf1|medial ring protein Mid1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 920
Score = 26.6 bits (56), Expect = 3.6
Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
Frame = +3
Query: 207 TDASVNFLPATAASQKHETAFPSPFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEG 386
T +S L +ET P A + + + +K+A +++ A T +P E
Sbjct: 138 TSSSTASLKGADIVADYETFNPDQNLAELSFDRSKSSRKRAVEVAEFSRA--KTMSPLEY 195
Query: 387 TSPYPYAL--PVSAFPSQASESLIPCLDPAKANIPQYSPFH 503
T +PY +S P++A +P L +++ P H
Sbjct: 196 TVQHPYQSHNELSTNPARARAGSVPNLARIPSDVKPVPPAH 236
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 26.2 bits (55), Expect = 4.8
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Frame = +3
Query: 270 PSPFAASYPHEETVNKKKQAGAPVQYAYAVPMTTA----PNEGTSPYPYALPVSAFPSQA 437
P P AA E ++ A V A +VP A P + P P A+PV Q
Sbjct: 635 PQPPAAPVVPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQPPAVPVVPEAGQL 694
Query: 438 SESLIPCLDP 467
+E ++P L P
Sbjct: 695 NEPVVPPLPP 704
Score = 25.4 bits (53), Expect = 8.3
Identities = 20/80 (25%), Positives = 34/80 (42%)
Frame = +3
Query: 207 TDASVNFLPATAASQKHETAFPSPFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEG 386
T AS P+T K ETA P S + +++ A ++ +A + N+
Sbjct: 375 TTASKQDSPSTVPVDKQETAKPINKQVSSNETSAQEEPRESVAALRARFAKANVSENNDP 434
Query: 387 TSPYPYALPVSAFPSQASES 446
+ A +S+F S+A S
Sbjct: 435 PTFPKTAAKISSFNSKAGTS 454
>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 528
Score = 26.2 bits (55), Expect = 4.8
Identities = 35/135 (25%), Positives = 53/135 (39%), Gaps = 16/135 (11%)
Frame = +3
Query: 228 LPATAASQKHETAFPSPFAASYPHE--ETVNKKK-----QAGAPVQYAYAVPMTTAPNEG 386
L A TA P A S P + T++ +K + G V Y +PMTTA G
Sbjct: 325 LRVMGAGNDASTAKGGPNAKSRPGDLFATIHVRKHPFFVREGTNVTYNAKIPMTTAALGG 384
Query: 387 TSPYP-----YALPVSAFPSQASESLIPCLDPAKANIPQYSPFHFFY----PQMMSAYTK 539
T P L VS S + K N +Y F+ + P+++S + +
Sbjct: 385 TLRVPTLTGNVDLRVSPGTSTGDRITMAGKGIRKVNTSRYGNFYVNFEVTIPKILSPHER 444
Query: 540 SMSILKEAGVNEDTA 584
S+ +N+ TA
Sbjct: 445 SLLEQLADALNDSTA 459
>SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 463
Score = 25.8 bits (54), Expect = 6.3
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +3
Query: 237 TAASQKHETAFPSPFAASYP 296
TAASQ E A PSP AA YP
Sbjct: 293 TAASQS-EAATPSPSAAVYP 311
>SPBP8B7.30c |thi5||transcription factor Thi5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 857
Score = 25.8 bits (54), Expect = 6.3
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 486 QYSPFHFFYPQMMSAYTKSMSILKEAGVNEDTANS 590
+Y F +FYP S ++ IL + VN DT ++
Sbjct: 345 RYQSFFYFYPP--SVFSNRYQILADGLVNSDTLDT 377
>SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 803
Score = 25.8 bits (54), Expect = 6.3
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Frame = +3
Query: 159 LYVAATEEDGVKSQWLTDASVNFLPATAASQKHETAFPSPFAASYPHEETVNKKKQAGAP 338
L++ A++ G+ S TD++ + LP+ + PS + ET + +A P
Sbjct: 503 LHLLASKSQGLPSPATTDSNTHMLPSQGSLLP-----PSSIS------ETKSFSTKASTP 551
Query: 339 VQY-AYAVPMTTAPNEGTSPYPYALPVSAFPSQASES 446
+ A P+++APN + YA S+ ++S S
Sbjct: 552 LSTDDIATPLSSAPNPPSVMPTYARKTSSHSERSSHS 588
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 25.8 bits (54), Expect = 6.3
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Frame = +3
Query: 231 PATAASQKHET-AFPSPFA--ASYPHEETVNKKKQAGAPVQYAYAVPMTTAP 377
PA AASQ A P P+ YP + + P Q AYA P+ P
Sbjct: 86 PAPAASQNRAYGAAPQPYPPQGGYPQQPYYYPNQPNYYPAQPAYAQPVYAQP 137
>SPCC1795.09 |yps1||aspartic protease Yps1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 521
Score = 25.4 bits (53), Expect = 8.3
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1
Query: 79 LNETTRINSIQYMDSISS 132
L +T INSI Y DSISS
Sbjct: 203 LAASTEINSIDYSDSISS 220
>SPBC16A3.18 |cip1||RNA-binding protein Cip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 490
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 270 PSPFAASYPHEETVNKKKQAGAPVQYAYAVPMT 368
P+P A + E ++N K A ++AVP+T
Sbjct: 409 PAPLATRFLQEHSLNGTKSAPITPPPSFAVPLT 441
>SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 557
Score = 25.4 bits (53), Expect = 8.3
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +3
Query: 351 YAVPMTTAPNEGTSPYPYALPVSAFPSQASESLIPCLDP 467
+ V MTT P+E P++ + PS +E DP
Sbjct: 21 FIVEMTTRPSETKKKVPFSEDMREIPSLPNEEEANATDP 59
>SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 565
Score = 25.4 bits (53), Expect = 8.3
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = +3
Query: 312 NKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSAFPSQASESLI 452
+KK A + V+ A + + T+P+ +A P S+FP+ ++ + +
Sbjct: 363 SKKLPASSDVKPPSAAAVGFSFGTTTNPFSFAAPKSSFPTSSTPASV 409
>SPCC1223.13 |cbf12||CBF1/Su|Schizosaccharomyces pombe|chr
3|||Manual
Length = 963
Score = 25.4 bits (53), Expect = 8.3
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +3
Query: 231 PATAASQKHETAFPSPFAASYPHEETVNKKKQAGA-PVQYAYAVPM-TTAPNEGTSPYPY 404
PA ++S+ H T+ SP+ + + +N A A P +++ +P + N T PY
Sbjct: 67 PAISSSKAHSTSSVSPYYSEKNESQALNADGTAFANPSFHSFGLPQEDSQDNTQTYSTPY 126
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,986,413
Number of Sequences: 5004
Number of extensions: 62756
Number of successful extensions: 219
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 218
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 341222980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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