Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11g18
(578 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0506 - 18188785-18190599 35 0.054
04_04_0596 - 26497863-26497913,26498010-26498081,26499015-264990... 33 0.16
10_08_0106 + 14842748-14843085,14843122-14843250,14844145-148442... 32 0.38
05_02_0140 - 7046100-7046460,7047072-7047262 31 0.66
01_06_1260 - 35820781-35821161,35821163-35821420,35821524-35821976 30 1.2
09_01_0019 + 403078-404211 30 1.5
08_01_0679 - 5933187-5933258,5933378-5933592,5934527-5934569 30 1.5
05_03_0368 - 13127536-13128429 29 2.7
09_06_0284 - 22027287-22027353,22028075-22028268 29 3.5
01_05_0147 + 18597194-18597643,18598347-18598681,18600073-186001... 29 3.5
04_04_1400 - 33259716-33260069,33260172-33260219,33260471-332605... 28 4.7
08_02_1084 - 24232968-24234779 28 6.2
04_04_0672 + 27164628-27164792,27164903-27164965,27165298-271654... 28 6.2
11_05_0027 - 18466042-18466431,18466669-18466739,18467105-18467351 27 8.2
03_02_0599 - 9730204-9730314,9730766-9731549,9731631-9732051,973... 27 8.2
02_01_0640 + 4796079-4797032,4797269-4797934 27 8.2
01_01_0660 + 5029070-5029177,5029303-5029398,5029494-5029556,502... 27 8.2
>09_04_0506 - 18188785-18190599
Length = 604
Score = 34.7 bits (76), Expect = 0.054
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 67 RHRSVDRDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAE-ERRRRLS 243
R R DR+ + D+ R D HG+ SDR + SSG +R+ + +RRR+S
Sbjct: 543 RERDRDRERERYRDDRDRHGDYHRHGKRESDRNEDWDRGRSSGRRSRSREVDHSKRRRMS 602
>04_04_0596 -
26497863-26497913,26498010-26498081,26499015-26499093,
26499440-26499553,26499822-26499871,26500353-26500398,
26501100-26501719
Length = 343
Score = 33.1 bits (72), Expect = 0.16
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +1
Query: 64 RRHRSVDRDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRLS 243
R+ R +++ + R +R + S + E+ S+ S Y D S+GSE EERRRR
Sbjct: 79 RKRRRKEKERRHRR-RRSRSASSGSSSESESESESS-YSDCSAGSESETDSEEERRRRRR 136
Query: 244 KR 249
+R
Sbjct: 137 RR 138
>10_08_0106 + 14842748-14843085,14843122-14843250,14844145-14844211,
14847177-14847324,14847998-14848097,14848306-14848384,
14848527-14848687,14848829-14848908,14849319-14849475,
14849575-14849723,14849909-14850076,14850426-14850719,
14851002-14851046,14851213-14851462,14851707-14851835,
14852799-14853039,14853977-14854642
Length = 1066
Score = 31.9 bits (69), Expect = 0.38
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Frame = +1
Query: 64 RRHRSVDRDVKARGDEHARMSDSQAHGEAMSDRRS----FF--YPDSSSGSEEYNRDAEE 225
R HR R+ A +E R + +GE D S F P SSS E +++A+E
Sbjct: 977 RHHRRHHREAAAAAEERRRPAAGDYYGEEEEDDESEEEQHFKRRPSSSSRREREHQEAQE 1036
Query: 226 RRRRLSKRSG 255
RR +R G
Sbjct: 1037 EPRRSRERRG 1046
>05_02_0140 - 7046100-7046460,7047072-7047262
Length = 183
Score = 31.1 bits (67), Expect = 0.66
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = +2
Query: 179 LIAAVARKSTTETRRSVGDVSQSDLEYRTGPALLQCSPGRVRLVTRCHRPLQLRNLRKTL 358
L AVA ++ E RR + D E R A + LV + Q+R+L +
Sbjct: 111 LAVAVAERAAVEARRRDAEARADDAEARLLAAEEEKDARAEELVLAAAKRRQIRDLELQI 170
Query: 359 RSTNSEMTESRW 394
++ N+ ++ RW
Sbjct: 171 QAVNNMTSKFRW 182
>01_06_1260 - 35820781-35821161,35821163-35821420,35821524-35821976
Length = 363
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -2
Query: 247 ALRDVSDAPPRLCCTLPSHCCYQDRKTTCDHSLPHHV 137
A+ S +PP +LPS +++ HSLPHH+
Sbjct: 58 AVSSSSSSPPSYSSSLPSSYYNNIQRSISSHSLPHHL 94
>09_01_0019 + 403078-404211
Length = 377
Score = 29.9 bits (64), Expect = 1.5
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 8/83 (9%)
Frame = +1
Query: 73 RSVDRDVKARGDEHARM-------SDSQAHGEAMSDR-RSFFYPDSSSGSEEYNRDAEER 228
RS D+ K+R H R SD + H ++ DR R + S S+E E+R
Sbjct: 247 RSKDKKKKSRRKRHERSDEDSESDSDKKRHRKSRKDRKRRRSHRRSDDTSDEDESGGEDR 306
Query: 229 RRRLSKRSGVSNRPRAPTMQSGA 297
RRR ++ +R A SG+
Sbjct: 307 RRRRHRKRQHHHRKGASDGDSGS 329
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/67 (25%), Positives = 25/67 (37%)
Frame = +1
Query: 64 RRHRSVDRDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRLS 243
+RH D D ++ D+ + S RRS D E R R+R+
Sbjct: 258 KRHERSDEDSESDSDKKRHRKSRKDRKRRRSHRRSDDTSDEDESGGEDRRRRRHRKRQHH 317
Query: 244 KRSGVSN 264
R G S+
Sbjct: 318 HRKGASD 324
>08_01_0679 - 5933187-5933258,5933378-5933592,5934527-5934569
Length = 109
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -2
Query: 148 PHHVPESQTYARARLRELLHHGPHSGASEAEI 53
P P +QT R ELL+HG SG + EI
Sbjct: 61 PRRSPSAQTRRRPAAAELLNHGLDSGVEDDEI 92
>05_03_0368 - 13127536-13128429
Length = 297
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 5/63 (7%)
Frame = +1
Query: 64 RRHRSVDRDVKARGDE-----HARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEER 228
RR RS + D + D+ H R S + S R Y D SS + + R
Sbjct: 228 RRERSCEEDSETDSDKKIKRRHHRKSSKEERERGRSRHRRRSYDDDSSDDDHHTLRRRRR 287
Query: 229 RRR 237
RRR
Sbjct: 288 RRR 290
>09_06_0284 - 22027287-22027353,22028075-22028268
Length = 86
Score = 28.7 bits (61), Expect = 3.5
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +2
Query: 191 VARKSTTETRRS-VGDVSQSDLEYRTGPALLQCSPGRVRLVTRCHRPLQLRNLRKTLRST 367
+ARKS ++TR V ++ + + +LQ +VR +T R + R R T S
Sbjct: 1 MARKSESQTRAGRVFELQEEEQGLHLLELVLQLK-NQVRSITPSRR-ISCRRKRIT-SSR 57
Query: 368 NSEMTESRWSWT 403
+S+MTESR W+
Sbjct: 58 SSKMTESRIQWS 69
>01_05_0147 +
18597194-18597643,18598347-18598681,18600073-18600147,
18600325-18600427,18601554-18601642,18602953-18603064,
18604093-18604146,18604271-18604319,18606236-18606347,
18606389-18606436,18607000-18607327
Length = 584
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 115 ARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRLSKR 249
+R S S+ + S RR + SSG +RD ++ RRR +R
Sbjct: 57 SRSSGSKRRKASSSSRRHRHHHHKSSGRSRRSRDDDDERRRRRRR 101
>04_04_1400 -
33259716-33260069,33260172-33260219,33260471-33260596,
33260850-33260900,33260963-33261055,33261217-33261272,
33261465-33261522,33262306-33262365,33262513-33262623,
33263368-33263949,33264026-33264097
Length = 536
Score = 28.3 bits (60), Expect = 4.7
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 88 DVKARGD-EHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRLSKR 249
+ K GD E + S++ + D D S SEE R EERRRR ++R
Sbjct: 124 EAKVGGDREEDKGGGSESGSGSDEDDSDGSGSDDSEDSEEERRREEERRRRRAER 178
>08_02_1084 - 24232968-24234779
Length = 603
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = +1
Query: 67 RHRSVDRDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRR 237
R R +R+ D+ R D H + S+R + SSG +R+ + +RR
Sbjct: 542 RERDRERERDRHRDDRDRYGDYHRHRDRDSERNEDWDRGRSSGVRSRSREVDHSKRR 598
>04_04_0672 +
27164628-27164792,27164903-27164965,27165298-27165408,
27165454-27165537,27166081-27166194,27166901-27167494,
27167604-27167675,27167761-27167997
Length = 479
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Frame = +1
Query: 61 PRRHRSVDRDVKARGDEHARMSDSQA---HGEAMSDRRSFFYPDSSSGSEEYNRDAEERR 231
PRRHR + + RGDE +R + ++ H ++ R G +E D + R
Sbjct: 31 PRRHRPAREEEEGRGDERSRSTWAEVVSDHKGGEAEERPDHRNSRRDGRQERREDGDWER 90
>11_05_0027 - 18466042-18466431,18466669-18466739,18467105-18467351
Length = 235
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 175 YPDSSSGSEEYNRDAEERRRRLSKRSGVSN 264
+ ++S+G EE + DAEE R + RSG +
Sbjct: 30 WEEASAGEEEDDGDAEEAERSATGRSGAES 59
>03_02_0599 -
9730204-9730314,9730766-9731549,9731631-9732051,
9732139-9732385,9733730-9733921,9734071-9734204,
9734316-9734477,9736162-9736200,9737507-9737825
Length = 802
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -2
Query: 256 LQIALRDVSDAPPRLCCTLPSHCCYQDRKTTCDHSLPHHV--PESQTYARARLRELLHH 86
L++ L + D+ ++ L CCY+D + C P V E+ +A L +L +H
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEDSRGFCASRFPSAVIPAENGLHAWQCLEDLQNH 139
>02_01_0640 + 4796079-4797032,4797269-4797934
Length = 539
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = +2
Query: 155 VIAGRFSILIAAVARKSTTETRRSVGDVSQSDLEYRTGPALLQCSPGRVRLVTRCH 322
VI ++ + +S R +GD L+ P ++ SPG R VTR H
Sbjct: 49 VIGSLHHVVGDRLLHRSMARIARRLGDAPLVYLQLGEVPVVVASSPGAAREVTRTH 104
>01_01_0660 +
5029070-5029177,5029303-5029398,5029494-5029556,
5029836-5029913,5030446-5030614,5030797-5031180,
5031959-5032042,5032143-5032288,5032810-5033070,
5033147-5033328,5033421-5033586,5033650-5033703,
5034702-5034965,5035088-5035303,5035388-5035540,
5035630-5035827
Length = 873
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/74 (24%), Positives = 29/74 (39%)
Frame = +1
Query: 64 RRHRSVDRDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRLS 243
+ H+ D+ V+A G R + Q EA RS+ +S S R E + +
Sbjct: 119 KSHKGSDQTVRASGKVRKREATGQKEKEAPHAHRSYHERRTSGLSSFKKRYYGELVKNIP 178
Query: 244 KRSGVSNRPRAPTM 285
+ PR P +
Sbjct: 179 RHPSGKRTPRVPVI 192
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.130 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,234,148
Number of Sequences: 37544
Number of extensions: 337748
Number of successful extensions: 1113
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1110
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1352600424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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