Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11g18
(578 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_3384| Best HMM Match : K_tetra (HMM E-Value=0.003) 97 1e-20
SB_25131| Best HMM Match : Ion_trans (HMM E-Value=1.9e-37) 36 0.018
SB_27575| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.055
SB_13958| Best HMM Match : K_tetra (HMM E-Value=7.00649e-45) 32 0.39
SB_11601| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_50216| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_28789| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_37423| Best HMM Match : K_tetra (HMM E-Value=3.2e-31) 30 1.6
SB_10901| Best HMM Match : SAM_1 (HMM E-Value=2.5e-09) 30 1.6
SB_57147| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_44639| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_13351| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_10909| Best HMM Match : TFIIB (HMM E-Value=0.14) 29 2.7
SB_10690| Best HMM Match : Pkinase (HMM E-Value=6.4e-08) 29 2.7
SB_27384| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_25947| Best HMM Match : TFIIB (HMM E-Value=0.0018) 29 3.6
SB_48494| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_33543| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_11439| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_8486| Best HMM Match : Granulin (HMM E-Value=0) 28 4.8
SB_52323| Best HMM Match : DUF1388 (HMM E-Value=5.8) 28 6.3
SB_51046| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_36529| Best HMM Match : K_tetra (HMM E-Value=2e-24) 28 6.3
SB_6747| Best HMM Match : K_tetra (HMM E-Value=1e-38) 28 6.3
SB_46471| Best HMM Match : K_tetra (HMM E-Value=1e-38) 28 6.3
SB_43693| Best HMM Match : ACBP (HMM E-Value=2.7) 28 6.3
SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
SB_35869| Best HMM Match : Piwi (HMM E-Value=4.6e-12) 27 8.4
SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
SB_540| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
SB_51730| Best HMM Match : Methyltransf_6 (HMM E-Value=8.8) 27 8.4
SB_45630| Best HMM Match : GIY-YIG (HMM E-Value=0.47) 27 8.4
SB_35438| Best HMM Match : GXGXG (HMM E-Value=1.9) 27 8.4
SB_27191| Best HMM Match : Lysis_S (HMM E-Value=5.6) 27 8.4
SB_18131| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
SB_16801| Best HMM Match : MSSP (HMM E-Value=0.31) 27 8.4
SB_14335| Best HMM Match : DUF1315 (HMM E-Value=2.7) 27 8.4
SB_344| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
>SB_3384| Best HMM Match : K_tetra (HMM E-Value=0.003)
Length = 395
Score = 96.7 bits (230), Expect = 1e-20
Identities = 42/65 (64%), Positives = 56/65 (86%)
Frame = +1
Query: 379 DRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNERGEYEVAEGISATVFRAI 558
+++TLVVDNTRFVVD S FTAHPNTM+GRMF S ++T N++GE EVA+GISA+VF+ I
Sbjct: 101 EKLTLVVDNTRFVVDRSLFTAHPNTMMGRMFGSNNDYTTRNDKGEVEVAQGISASVFKCI 160
Query: 559 LEYYR 573
L++Y+
Sbjct: 161 LDFYK 165
>SB_25131| Best HMM Match : Ion_trans (HMM E-Value=1.9e-37)
Length = 464
Score = 36.3 bits (80), Expect = 0.018
Identities = 23/66 (34%), Positives = 31/66 (46%)
Frame = +1
Query: 376 DDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNERGEYEVAEGISATVFRA 555
D R+TL V RF S +PNT+LG S + E+ EY + +FR
Sbjct: 67 DKRVTLNVSGRRFCTWESTLKKYPNTLLG---SDALNLYFDKEKREYFLDR--DPHIFRY 121
Query: 556 ILEYYR 573
IL YY+
Sbjct: 122 ILNYYK 127
>SB_27575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 661
Score = 34.7 bits (76), Expect = 0.055
Identities = 24/73 (32%), Positives = 32/73 (43%)
Frame = +1
Query: 355 APKHQLGDDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNERGEYEVAEGI 534
A + GD R+T V RF S PNT+LG S I+ + EY +
Sbjct: 52 AQRRSAGDKRVTFNVSGRRFETWESTLKRFPNTVLG---SKMIQRFYDTNTKEYFIDR-- 106
Query: 535 SATVFRAILEYYR 573
+FR +L YYR
Sbjct: 107 DPYLFRFVLNYYR 119
>SB_13958| Best HMM Match : K_tetra (HMM E-Value=7.00649e-45)
Length = 623
Score = 31.9 bits (69), Expect = 0.39
Identities = 23/80 (28%), Positives = 34/80 (42%)
Frame = +1
Query: 334 AQEPPKNAPKHQLGDDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNERGE 513
A P P+ D+R+T+ V RF + P T+LG S ++ + E E
Sbjct: 23 ATSPMPPPPESSKTDERVTINVSGRRFETWRNTLARFPETLLG---SDEKDYFYDAETKE 79
Query: 514 YEVAEGISATVFRAILEYYR 573
Y +FR +L YYR
Sbjct: 80 YFFDR--DPDLFRHLLNYYR 97
>SB_11601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 490
Score = 30.7 bits (66), Expect = 0.90
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 271 GACSILQIALRDVSDAPPRLCC 206
G CS+L++ + D +DA P CC
Sbjct: 113 GGCSVLEVNVSDTADAGPEHCC 134
>SB_50216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3293
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = +1
Query: 58 PPRR-HRSV---DRDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEE 225
PPR H S+ D+D+ A+ + SDS H ++++ RS F ++ S E N+ ++
Sbjct: 239 PPRPGHHSMGSNDQDLVAKWLRDDKASDSPDHNLSVNEARSQF--EAQENSSE-NKPEQQ 295
Query: 226 RRRRLSKRSGVSNRP 270
+ S+ S RP
Sbjct: 296 NKSNFSRSKSFSGRP 310
>SB_28789| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 74
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +1
Query: 103 GDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRLSKRSGVSNRPR 273
GD H+ ++S GE++ D R +P SGS E + + RR S+ + N R
Sbjct: 14 GDGHSGETESITQGESLRD-RMLKHPQQGSGSHENQKSESKVTRRDSRGNEEVNLSR 69
>SB_37423| Best HMM Match : K_tetra (HMM E-Value=3.2e-31)
Length = 153
Score = 29.9 bits (64), Expect = 1.6
Identities = 23/79 (29%), Positives = 38/79 (48%)
Frame = +1
Query: 337 QEPPKNAPKHQLGDDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNERGEY 516
QE K K + ++ T+ V RF+VD F+ P+T+LG F P+++ EY
Sbjct: 33 QEREKAKEKARNRNNFTTINVSGRRFLVDIEIFSRFPDTLLGSTMKQ--HFYDPSKK-EY 89
Query: 517 EVAEGISATVFRAILEYYR 573
VF+ I+ +Y+
Sbjct: 90 FFDR--DPEVFKYIITFYK 106
>SB_10901| Best HMM Match : SAM_1 (HMM E-Value=2.5e-09)
Length = 1472
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 7/45 (15%)
Frame = -2
Query: 169 TTCDHSLPHHVPESQTY-------ARARLRELLHHGPHSGASEAE 56
+TCD+S PH PES T R R HH P S + E
Sbjct: 391 STCDNSTPHKPPESPTELSTMPQPVSPRERGKAHHSPKSSPEDGE 435
>SB_57147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 29.1 bits (62), Expect = 2.7
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -2
Query: 271 GACSILQIALRDVSDAPPRLCC 206
G CS+L++ + + +DA P CC
Sbjct: 882 GGCSVLEVNVSNTADAEPEHCC 903
>SB_44639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 29.1 bits (62), Expect = 2.7
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -2
Query: 271 GACSILQIALRDVSDAPPRLCC 206
G CS+L++ + + +DA P CC
Sbjct: 71 GGCSVLEVNVSNTADAEPEHCC 92
>SB_13351| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 501
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = +1
Query: 385 ITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNERGEYEVAEGISATVFRAILE 564
I L V F T P++MLG MFS I + + G + + T+FR IL
Sbjct: 277 IDLNVGGNHFTTTLLTLTTFPDSMLGSMFSGRIP-VNRDSNGRFFIDR--DGTLFRYILN 333
Query: 565 YYR 573
+ R
Sbjct: 334 FLR 336
>SB_10909| Best HMM Match : TFIIB (HMM E-Value=0.14)
Length = 666
Score = 29.1 bits (62), Expect = 2.7
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -2
Query: 271 GACSILQIALRDVSDAPPRLCC 206
G CS+L++ + + +DA P CC
Sbjct: 128 GGCSVLEVNVSNTADAEPEHCC 149
>SB_10690| Best HMM Match : Pkinase (HMM E-Value=6.4e-08)
Length = 865
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = +1
Query: 67 RHRSVDRDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRLSK 246
+ RS RD AR E S + DRRS + + +S + +R+ + R SK
Sbjct: 340 KRRSSSRDESAR--ERPDSSYRRRSKSKSPDRRSRKFEEQTSHRQSMSRERDRRPVEASK 397
Query: 247 RSG 255
RSG
Sbjct: 398 RSG 400
>SB_27384| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1032
Score = 29.1 bits (62), Expect = 2.7
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -2
Query: 271 GACSILQIALRDVSDAPPRLCC 206
G CS+L++ + + +DA P CC
Sbjct: 320 GGCSVLEVNVSNTADAEPEHCC 341
>SB_25947| Best HMM Match : TFIIB (HMM E-Value=0.0018)
Length = 581
Score = 28.7 bits (61), Expect = 3.6
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -2
Query: 271 GACSILQIALRDVSDAPPRLCC 206
G C +L++ + D +DA P CC
Sbjct: 55 GGCPVLEVNVSDTADAGPEHCC 76
>SB_48494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 28.7 bits (61), Expect = 3.6
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -2
Query: 271 GACSILQIALRDVSDAPPRLCC 206
G C +L++ + D +DA P CC
Sbjct: 65 GGCPVLEVNVSDTADAGPEHCC 86
>SB_33543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 838
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +1
Query: 361 KHQLGDDRITLVVDNTRFVVDPSQF 435
K QL DR LV D T+FV+D ++F
Sbjct: 800 KTQLVIDRTQLVTDGTQFVIDKTRF 824
>SB_11439| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 303
Score = 28.3 bits (60), Expect = 4.8
Identities = 20/58 (34%), Positives = 26/58 (44%)
Frame = +2
Query: 203 STTETRRSVGDVSQSDLEYRTGPALLQCSPGRVRLVTRCHRPLQLRNLRKTLRSTNSE 376
S ++ S G+ SQ D PAL P R ++T R R RK L + NSE
Sbjct: 242 SASQKELSDGEGSQGD------PALASFRPRRQHIITMATRKSSARERRKMLGTRNSE 293
>SB_8486| Best HMM Match : Granulin (HMM E-Value=0)
Length = 878
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/59 (23%), Positives = 24/59 (40%)
Frame = -2
Query: 265 CSILQIALRDVSDAPPRLCCTLPSHCCYQDRKTTCDHSLPHHVPESQTYARARLRELLH 89
C + + L P +CC HCC K CD + H + ++++ L+H
Sbjct: 128 CCLTEFGLYGCCPTPKAVCCLDRLHCCPSGYK--CDLA-RHECVQENVQTNSQVKPLIH 183
>SB_52323| Best HMM Match : DUF1388 (HMM E-Value=5.8)
Length = 302
Score = 27.9 bits (59), Expect = 6.3
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = +1
Query: 88 DVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYN--RDAEERRRRL-SKRSGV 258
DVK D D++AH RRS P+ +G E + RD EER+ + S+R V
Sbjct: 226 DVKRSPDVRRTPDDARAHKSPDVPRRSPDVPNRYNGVHEKSPWRDGEERKIVIKSEREDV 285
Query: 259 S 261
S
Sbjct: 286 S 286
>SB_51046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 261
Score = 27.9 bits (59), Expect = 6.3
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 6/76 (7%)
Frame = +1
Query: 88 DVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEE------RRRRLSKR 249
D + D + SDS + S S SSS SEE + + E+ R++ +
Sbjct: 108 DAEGSSDSDSDSSDSSGSDDDSSSSSSSSSSSSSSSSEETDNETEQPATPAPSRQKPTSL 167
Query: 250 SGVSNRPRAPTMQSGA 297
+G S P Q+GA
Sbjct: 168 NGASLGYDTPAFQAGA 183
>SB_36529| Best HMM Match : K_tetra (HMM E-Value=2e-24)
Length = 279
Score = 27.9 bits (59), Expect = 6.3
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +1
Query: 376 DDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNERGEYEVAEGISATVFRA 555
+DRI + + R+ S +PNT+LG S I+ + ++ + E + F A
Sbjct: 18 NDRIVINISGERYETLESTLMRYPNTLLG----SPIKRSQYFDQRQCEYFXNRNRQAFDA 73
Query: 556 ILEYYR 573
IL YY+
Sbjct: 74 ILFYYQ 79
>SB_6747| Best HMM Match : K_tetra (HMM E-Value=1e-38)
Length = 404
Score = 27.9 bits (59), Expect = 6.3
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +1
Query: 376 DDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNERGEYEVAEGISATVFRA 555
D RIT+ V +FV HP+T+LG ++F +R E +FR
Sbjct: 24 DRRITINVSGKKFVTWEKTLRKHPSTLLGS--DRLMQFFDETKR---EFFLDRDPHMFRY 78
Query: 556 ILEYYR 573
IL +YR
Sbjct: 79 ILNFYR 84
>SB_46471| Best HMM Match : K_tetra (HMM E-Value=1e-38)
Length = 347
Score = 27.9 bits (59), Expect = 6.3
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +1
Query: 376 DDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNERGEYEVAEGISATVFRA 555
D RIT+ V +FV HP+T+LG ++F +R E +FR
Sbjct: 24 DRRITINVSGKKFVTWEKTLRKHPSTLLGS--DRLMQFFDETKR---EFFLDRDPHMFRY 78
Query: 556 ILEYYR 573
IL +YR
Sbjct: 79 ILNFYR 84
>SB_43693| Best HMM Match : ACBP (HMM E-Value=2.7)
Length = 354
Score = 27.9 bits (59), Expect = 6.3
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = +1
Query: 88 DVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYN--RDAEERRRRL-SKRSGV 258
DVK D D++AH RRS P+ +G E + RD EER+ + S+R V
Sbjct: 200 DVKRSPDVRRTPDDARAHKSPDVPRRSPDVPNRYNGVHEKSPWRDGEERKIVIKSEREDV 259
Query: 259 S 261
S
Sbjct: 260 S 260
>SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1524
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +1
Query: 85 RDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRLSKRS 252
R ++ ++H R S S + R S+ DS EY+RD+ LS+ S
Sbjct: 1416 RSSRSSYEDHPRSSRSSYEDRSRDSRGSYGARDSYGSYPEYSRDSRGGYANLSRDS 1471
>SB_35869| Best HMM Match : Piwi (HMM E-Value=4.6e-12)
Length = 243
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +1
Query: 361 KHQLGDDRITLVVDNTRFVVDPSQFTAHPNTMLGR 465
+H D R L+ RF+ +FTAH + ++ R
Sbjct: 170 RHATHDKRHRLITREDRFITREDRFTAHEDRIIAR 204
>SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 903
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/58 (24%), Positives = 24/58 (41%)
Frame = +1
Query: 64 RRHRSVDRDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRR 237
++ +R K + +E R + + H E + Y DS G + EER+ R
Sbjct: 482 KQREEEERKQKEKEEEKKRKEEERKHKEEEEKKTEESYDDSWRGRRARRKAEEERKER 539
>SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 737
Score = 27.5 bits (58), Expect = 8.4
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 67 RHRSVDRDVKARGDEHARMSDSQAHG-EAMSDRRSFFYPDSSSGSEEYNRDAEERRRRLS 243
+HRS DR + GD H R Q G +A +D R + S ++ ++E++ + +
Sbjct: 267 KHRSKDRTRRDSGDSHERQHRPQRSGSDASNDSRRGTH---RSRKHKHRLESEKKAKNVK 323
Query: 244 K 246
K
Sbjct: 324 K 324
>SB_540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 27.5 bits (58), Expect = 8.4
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +1
Query: 64 RRHRSVDRDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRLS 243
R RS +R +E R + + +A + +S SGS + + E RRR L
Sbjct: 116 RDRRSKERSKDESKEERRRSKERENSPDAKKGKDK---ENSDSGSSDSETELENRRRALL 172
Query: 244 KRSGVSN 264
K V+N
Sbjct: 173 KELEVAN 179
>SB_51730| Best HMM Match : Methyltransf_6 (HMM E-Value=8.8)
Length = 409
Score = 27.5 bits (58), Expect = 8.4
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -1
Query: 536 EIPSATSYSPLSFGCVNSIPELNILPSIVLGCAVN*EGSTTNLVLSTTNVIRSSP 372
++ S T Y NSI L+I ++ V S T V+ T N+ RS P
Sbjct: 55 KVISKTEYGSKLPNITNSIDTLHINTDLITDSIVGGRASNTLFVIQTHNLSRSYP 109
>SB_45630| Best HMM Match : GIY-YIG (HMM E-Value=0.47)
Length = 200
Score = 27.5 bits (58), Expect = 8.4
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = +1
Query: 85 RDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRLSKRSG--V 258
R +K R ++H R DSQ+ F P+ SS E + R R S R G
Sbjct: 120 RKLKERFNDHRRTVDSQSRSIPTHAAEHFLKPNHSSSDIELIPIEKIRNNRDSIRKGREA 179
Query: 259 SNRPRAPTMQSG 294
+ RA T++ G
Sbjct: 180 TLIARANTLEPG 191
>SB_35438| Best HMM Match : GXGXG (HMM E-Value=1.9)
Length = 602
Score = 27.5 bits (58), Expect = 8.4
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -1
Query: 536 EIPSATSYSPLSFGCVNSIPELNILPSIVLGCAVN*EGSTTNLVLSTTNVIRSSP 372
++ S T Y NSI L+I ++ V S T V+ T N+ RS P
Sbjct: 55 KVISKTEYGSKLPNITNSIDTLHINTDLITDSIVGGRASNTLFVIQTHNLSRSYP 109
>SB_27191| Best HMM Match : Lysis_S (HMM E-Value=5.6)
Length = 181
Score = 27.5 bits (58), Expect = 8.4
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -1
Query: 536 EIPSATSYSPLSFGCVNSIPELNILPSIVLGCAVN*EGSTTNLVLSTTNVIRSSP 372
++ S T Y NSI L+I ++ V S T V+ T N+ RS P
Sbjct: 77 KVISKTEYGSKLPNITNSIDTLHINTDLITDSIVGGRASNTLFVIPTDNLSRSYP 131
>SB_18131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +1
Query: 85 RDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRLSKRS 252
R ++ ++H R S S + R S+ DS EY+RD+ LS+ S
Sbjct: 87 RSSRSSYEDHPRSSRSSYEDRSRDSRGSYGARDSYGSYPEYSRDSRGGYANLSRDS 142
>SB_16801| Best HMM Match : MSSP (HMM E-Value=0.31)
Length = 571
Score = 27.5 bits (58), Expect = 8.4
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +1
Query: 394 VVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNERGEYEVAEGISATVFRAILEYY 570
V+D+T+FV+D +QF +T R+ IEF P A F YY
Sbjct: 420 VIDSTQFVIDSTQFVI-DSTHFVRLDPICIEFLQPGGSTSSRAAATAVELQFALYESYY 477
>SB_14335| Best HMM Match : DUF1315 (HMM E-Value=2.7)
Length = 1223
Score = 27.5 bits (58), Expect = 8.4
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -1
Query: 536 EIPSATSYSPLSFGCVNSIPELNILPSIVLGCAVN*EGSTTNLVLSTTNVIRSSP 372
++ S T Y NSI L+I ++ V S T V+ T N+ RS P
Sbjct: 654 KVISKTEYGSKLPNITNSIDTLHINTDLITDSIVGGRASNTLFVIQTHNLSRSYP 708
>SB_344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 510
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 64 RRHRSVDRDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDS-SSGSEEYNRD 216
R RSV++D + GD A+ D++ G++ D S Y D+ G+++ + D
Sbjct: 460 RESRSVEKDNE--GDADAKDEDAKLEGKSPEDEISEHYQDTGEDGNDQEDSD 509
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.130 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,394,960
Number of Sequences: 59808
Number of extensions: 379876
Number of successful extensions: 1503
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1501
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1385833362
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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