Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11g18
(578 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC005071-1|AAH05071.2| 475|Homo sapiens BTB (POZ) domain contai... 113 4e-25
AY221959-1|AAO64360.1| 475|Homo sapiens BTB domain containing 1... 113 4e-25
Z85986-2|CAI19118.1| 348|Homo sapiens potassium channel tetrame... 105 1e-22
AY305862-1|AAP74385.1| 419|Homo sapiens K+ channel tetramerizat... 105 1e-22
AL136135-1|CAH72192.1| 348|Homo sapiens potassium channel tetra... 105 1e-22
BC062633-1|AAH62633.1| 266|Homo sapiens BTBD10 protein protein. 46 1e-04
BC045659-1|AAH45659.1| 647|Homo sapiens potassium voltage-gated... 36 0.078
AJ005898-1|CAA06755.1| 647|Homo sapiens shal-type potassium cha... 36 0.078
AF166006-1|AAF65617.1| 647|Homo sapiens voltage-gated potassium... 36 0.078
AF166003-1|AAF65516.1| 647|Homo sapiens voltage-gated potassium... 36 0.078
AB021865-1|BAA96454.1| 647|Homo sapiens shal-type potassium cha... 36 0.078
M74002-1|AAA35554.1| 484|Homo sapiens arginine-rich nuclear pro... 32 1.7
BX641004-1|CAE46007.1| 332|Homo sapiens hypothetical protein pr... 32 1.7
BC112350-1|AAI12351.1| 955|Homo sapiens THRAP3 protein protein. 32 1.7
BC112330-1|AAI12331.1| 955|Homo sapiens thyroid hormone recepto... 32 1.7
BC065519-1|AAH65519.1| 374|Homo sapiens THRAP3 protein protein. 32 1.7
BC054046-1|AAH54046.1| 373|Homo sapiens THRAP3 protein protein. 32 1.7
BC040436-1|AAH40436.1| 483|Homo sapiens splicing factor, argini... 32 1.7
BC037554-1|AAH37554.1| 672|Homo sapiens THRAP3 protein protein. 32 1.7
BC019076-1|AAH19076.1| 373|Homo sapiens Unknown (protein for IM... 32 1.7
BC010997-1|AAH10997.1| 375|Homo sapiens THRAP3 protein protein. 32 1.7
BC002501-1|AAH02501.1| 375|Homo sapiens THRAP3 protein protein. 32 1.7
AL591845-1|CAH71859.1| 955|Homo sapiens thyroid hormone recepto... 32 1.7
AL353771-7|CAI22336.1| 424|Homo sapiens splicing factor, argini... 32 1.7
AL353771-6|CAI22335.1| 484|Homo sapiens splicing factor, argini... 32 1.7
AL353771-5|CAI22334.1| 483|Homo sapiens splicing factor, argini... 32 1.7
AF117756-1|AAD22034.1| 955|Homo sapiens thyroid hormone recepto... 32 1.7
BC053992-1|AAH53992.1| 1312|Homo sapiens SR-related CTD-associat... 31 2.2
AK024444-1|BAB15734.1| 1343|Homo sapiens FLJ00034 protein protein. 31 2.2
AF254411-1|AAF87552.1| 1312|Homo sapiens ser/arg-rich pre-mRNA s... 31 2.2
BC113477-1|AAI13478.1| 636|Homo sapiens potassium voltage-gated... 31 2.9
BC113475-1|AAI13476.1| 636|Homo sapiens potassium voltage-gated... 31 2.9
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 31 2.9
AL512665-2|CAI16955.1| 636|Homo sapiens potassium voltage-gated... 31 2.9
AL512665-1|CAI16956.1| 655|Homo sapiens potassium voltage-gated... 31 2.9
AL450997-2|CAI19097.1| 636|Homo sapiens potassium voltage-gated... 31 2.9
AL450997-1|CAI19096.1| 655|Homo sapiens potassium voltage-gated... 31 2.9
AL049557-3|CAB55687.2| 636|Homo sapiens potassium voltage-gated... 31 2.9
AL049557-2|CAI22711.1| 655|Homo sapiens potassium voltage-gated... 31 2.9
AF205857-1|AAF20925.1| 655|Homo sapiens potassium ionic channel... 31 2.9
AF205856-1|AAF20924.1| 636|Homo sapiens potassium ionic channel... 31 2.9
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 31 2.9
AF187964-1|AAF01045.1| 636|Homo sapiens voltage gated potassium... 31 2.9
AF187963-1|AAF01044.1| 655|Homo sapiens voltage gated potassium... 31 2.9
AF166011-2|AAF68178.1| 636|Homo sapiens voltage-gated potassium... 31 2.9
AF166011-1|AAF68177.1| 655|Homo sapiens voltage-gated potassium... 31 2.9
AF120491-1|AAD38898.1| 655|Homo sapiens Sha1-related potassium ... 31 2.9
AF048713-1|AAC05122.1| 655|Homo sapiens Kv4.3 potassium channel... 31 2.9
AF048712-1|AAC05121.1| 636|Homo sapiens Kv4.3 potassium channel... 31 2.9
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 31 2.9
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 31 2.9
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 31 2.9
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 31 2.9
BC110450-1|AAI10451.1| 630|Homo sapiens potassium voltage-gated... 31 3.9
BC110449-1|AAI10450.1| 630|Homo sapiens potassium voltage-gated... 31 3.9
AJ010969-1|CAB56841.1| 630|Homo sapiens potassium channel Kv4.2... 31 3.9
AF166008-1|AAF65618.1| 630|Homo sapiens voltage-gated potassium... 31 3.9
AF142568-1|AAD52159.1| 372|Homo sapiens voltage-gated potassium... 31 3.9
AF121104-1|AAD22053.1| 630|Homo sapiens potassium channel KV4.2... 31 3.9
AC092020-1|AAS07530.1| 372|Homo sapiens unknown protein. 31 3.9
AB028967-1|BAA82996.2| 646|Homo sapiens KIAA1044 protein protein. 31 3.9
BC057834-1|AAH57834.1| 58|Homo sapiens LOC388969 protein protein. 30 5.1
BC036058-1|AAH36058.1| 260|Homo sapiens potassium channel tetra... 30 6.8
AK074934-1|BAC11301.1| 237|Homo sapiens protein ( Homo sapiens ... 30 6.8
X99897-1|CAA68172.1| 2262|Homo sapiens calcium channel alpha1 su... 29 9.0
U79668-1|AAB49678.1| 916|Homo sapiens alpha1A-voltage-dependent... 29 9.0
U79667-1|AAB49677.1| 1182|Homo sapiens alpha1A-voltage-dependent... 29 9.0
U79666-1|AAB64179.1| 2505|Homo sapiens alpha1A-voltage-dependent... 29 9.0
U79665-1|AAB49676.1| 1194|Homo sapiens alpha1A-voltage-sensitive... 29 9.0
U79664-1|AAB49675.1| 949|Homo sapiens alpha1A-voltage-dependent... 29 9.0
U79663-1|AAB49674.1| 949|Homo sapiens alpha1A-voltage-dependent... 29 9.0
S76537-1|AAB33068.1| 115|Homo sapiens P-type voltage-gated calc... 29 9.0
BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding prote... 29 9.0
BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding prote... 29 9.0
AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding prot... 29 9.0
AF100774-1|AAC77460.1| 980|Homo sapiens voltage-dependent P/Q t... 29 9.0
AF004884-1|AAB61613.1| 2510|Homo sapiens neuronal calcium channe... 29 9.0
AF004883-1|AAB61612.1| 2266|Homo sapiens neuronal calcium channe... 29 9.0
AB035727-1|BAA94766.2| 2506|Homo sapiens alpha1A-voltage-depende... 29 9.0
AB035726-1|BAA94765.1| 2472|Homo sapiens alpha1A-voltage-depende... 29 9.0
AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein N... 29 9.0
>BC005071-1|AAH05071.2| 475|Homo sapiens BTB (POZ) domain
containing 10 protein.
Length = 475
Score = 113 bits (272), Expect = 4e-25
Identities = 59/110 (53%), Positives = 73/110 (66%), Gaps = 2/110 (1%)
Frame = +1
Query: 250 SGVSNRPRAPTMQSGACXXXXXXXXXXXAQEPPKNAPKHQLGDDRITLVVDNTRFVVDPS 429
+G S+R + + G+C E K ++ +R+TL+VDNTRFVVDPS
Sbjct: 127 AGNSSRNSSQSSSDGSCKTAGEMVF---VYENAKEGARNIRTSERVTLIVDNTRFVVDPS 183
Query: 430 QFTAHPNTMLGRMFSSGIE--FTHPNERGEYEVAEGISATVFRAILEYYR 573
FTA PNTMLGRMF SG E FT PNE+GEYEVAEGI +TVFRAIL+YY+
Sbjct: 184 IFTAQPNTMLGRMFGSGREHNFTRPNEKGEYEVAEGIGSTVFRAILDYYK 233
>AY221959-1|AAO64360.1| 475|Homo sapiens BTB domain containing 10
protein.
Length = 475
Score = 113 bits (272), Expect = 4e-25
Identities = 59/110 (53%), Positives = 73/110 (66%), Gaps = 2/110 (1%)
Frame = +1
Query: 250 SGVSNRPRAPTMQSGACXXXXXXXXXXXAQEPPKNAPKHQLGDDRITLVVDNTRFVVDPS 429
+G S+R + + G+C E K ++ +R+TL+VDNTRFVVDPS
Sbjct: 127 AGNSSRNSSQSSSDGSCKTAGEMVF---VYENAKEGARNIRTSERVTLIVDNTRFVVDPS 183
Query: 430 QFTAHPNTMLGRMFSSGIE--FTHPNERGEYEVAEGISATVFRAILEYYR 573
FTA PNTMLGRMF SG E FT PNE+GEYEVAEGI +TVFRAIL+YY+
Sbjct: 184 IFTAQPNTMLGRMFGSGREHNFTRPNEKGEYEVAEGIGSTVFRAILDYYK 233
>Z85986-2|CAI19118.1| 348|Homo sapiens potassium channel
tetramerisation domain containing 20 protein.
Length = 348
Score = 105 bits (251), Expect = 1e-22
Identities = 47/72 (65%), Positives = 58/72 (80%), Gaps = 2/72 (2%)
Frame = +1
Query: 364 HQLGDDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIE--FTHPNERGEYEVAEGIS 537
H +++TL+VD TRFVV+P FTAHP+TMLGRMF G E FT PNE+GEYE+AEGIS
Sbjct: 41 HSQAPEKVTLLVDGTRFVVNPQIFTAHPDTMLGRMFGPGREYNFTRPNEKGEYEIAEGIS 100
Query: 538 ATVFRAILEYYR 573
ATVFR +L+YY+
Sbjct: 101 ATVFRTVLDYYK 112
>AY305862-1|AAP74385.1| 419|Homo sapiens K+ channel tetramerization
protein protein.
Length = 419
Score = 105 bits (251), Expect = 1e-22
Identities = 47/72 (65%), Positives = 58/72 (80%), Gaps = 2/72 (2%)
Frame = +1
Query: 364 HQLGDDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIE--FTHPNERGEYEVAEGIS 537
H +++TL+VD TRFVV+P FTAHP+TMLGRMF G E FT PNE+GEYE+AEGIS
Sbjct: 112 HSQAPEKVTLLVDGTRFVVNPQIFTAHPDTMLGRMFGPGREYNFTRPNEKGEYEIAEGIS 171
Query: 538 ATVFRAILEYYR 573
ATVFR +L+YY+
Sbjct: 172 ATVFRTVLDYYK 183
>AL136135-1|CAH72192.1| 348|Homo sapiens potassium channel
tetramerisation domain containing 20 protein.
Length = 348
Score = 105 bits (251), Expect = 1e-22
Identities = 47/72 (65%), Positives = 58/72 (80%), Gaps = 2/72 (2%)
Frame = +1
Query: 364 HQLGDDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIE--FTHPNERGEYEVAEGIS 537
H +++TL+VD TRFVV+P FTAHP+TMLGRMF G E FT PNE+GEYE+AEGIS
Sbjct: 41 HSQAPEKVTLLVDGTRFVVNPQIFTAHPDTMLGRMFGPGREYNFTRPNEKGEYEIAEGIS 100
Query: 538 ATVFRAILEYYR 573
ATVFR +L+YY+
Sbjct: 101 ATVFRTVLDYYK 112
>BC062633-1|AAH62633.1| 266|Homo sapiens BTBD10 protein protein.
Length = 266
Score = 46.0 bits (104), Expect = 1e-04
Identities = 19/24 (79%), Positives = 23/24 (95%)
Frame = +1
Query: 502 ERGEYEVAEGISATVFRAILEYYR 573
E+GEYEVAEGI +TVFRAIL+YY+
Sbjct: 1 EKGEYEVAEGIGSTVFRAILDYYK 24
>BC045659-1|AAH45659.1| 647|Homo sapiens potassium voltage-gated
channel, Shal-related subfamily, member 1 protein.
Length = 647
Score = 36.3 bits (80), Expect = 0.078
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +1
Query: 334 AQEPPKNAP--KHQLGDDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNER 507
AQ+P AP K GD+ + + V RF + +P+T+LG SS EF + +
Sbjct: 23 AQQPLPPAPGVKASRGDEVLVVNVSGRRFETWKNTLDRYPDTLLG---SSEKEFFYDADS 79
Query: 508 GEYEVAEGISATVFRAILEYYR 573
GEY +FR +L +YR
Sbjct: 80 GEYFFDR--DPDMFRHVLNFYR 99
>AJ005898-1|CAA06755.1| 647|Homo sapiens shal-type potassium
channel protein.
Length = 647
Score = 36.3 bits (80), Expect = 0.078
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +1
Query: 334 AQEPPKNAP--KHQLGDDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNER 507
AQ+P AP K GD+ + + V RF + +P+T+LG SS EF + +
Sbjct: 23 AQQPLPPAPGVKASRGDEVLVVNVSGRRFETWKNTLDRYPDTLLG---SSEKEFFYDADS 79
Query: 508 GEYEVAEGISATVFRAILEYYR 573
GEY +FR +L +YR
Sbjct: 80 GEYFFDR--DPDMFRHVLNFYR 99
>AF166006-1|AAF65617.1| 647|Homo sapiens voltage-gated potassium
channel Kv4.1 protein.
Length = 647
Score = 36.3 bits (80), Expect = 0.078
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +1
Query: 334 AQEPPKNAP--KHQLGDDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNER 507
AQ+P AP K GD+ + + V RF + +P+T+LG SS EF + +
Sbjct: 23 AQQPLPPAPGVKASRGDEVLVVNVSGRRFETWKNTLDRYPDTLLG---SSEKEFFYDADS 79
Query: 508 GEYEVAEGISATVFRAILEYYR 573
GEY +FR +L +YR
Sbjct: 80 GEYFFDR--DPDMFRHVLNFYR 99
>AF166003-1|AAF65516.1| 647|Homo sapiens voltage-gated potassium
channel Kv4.1 protein.
Length = 647
Score = 36.3 bits (80), Expect = 0.078
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +1
Query: 334 AQEPPKNAP--KHQLGDDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNER 507
AQ+P AP K GD+ + + V RF + +P+T+LG SS EF + +
Sbjct: 23 AQQPLPPAPGVKASRGDEVLVVNVSGRRFETWKNTLDRYPDTLLG---SSEKEFFYDADS 79
Query: 508 GEYEVAEGISATVFRAILEYYR 573
GEY +FR +L +YR
Sbjct: 80 GEYFFDR--DPDMFRHVLNFYR 99
>AB021865-1|BAA96454.1| 647|Homo sapiens shal-type potassium
channel (Kv4.1) protein.
Length = 647
Score = 36.3 bits (80), Expect = 0.078
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +1
Query: 334 AQEPPKNAP--KHQLGDDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNER 507
AQ+P AP K GD+ + + V RF + +P+T+LG SS EF + +
Sbjct: 23 AQQPLPPAPGVKASRGDEVLVVNVSGRRFETWKNTLDRYPDTLLG---SSEKEFFYDADS 79
Query: 508 GEYEVAEGISATVFRAILEYYR 573
GEY +FR +L +YR
Sbjct: 80 GEYFFDR--DPDMFRHVLNFYR 99
>M74002-1|AAA35554.1| 484|Homo sapiens arginine-rich nuclear
protein protein.
Length = 484
Score = 31.9 bits (69), Expect = 1.7
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +1
Query: 61 PRRHRSVDRDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRL 240
PRR RS R+ R ++ D + E +RS P S S + +R A RRR
Sbjct: 290 PRRRRSHSRERGRRSRSTSKTRDKKK--EDKEKKRSKTPPKSYSTARR-SRSASRERRRR 346
Query: 241 SKRSGVSN--RPRAP 279
RSG + +PR+P
Sbjct: 347 RSRSGTRSPKKPRSP 361
>BX641004-1|CAE46007.1| 332|Homo sapiens hypothetical protein
protein.
Length = 332
Score = 31.9 bits (69), Expect = 1.7
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +1
Query: 61 PRRHRSVDRDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRL 240
PRR RS R+ R ++ D + E +RS P S S + +R A RRR
Sbjct: 138 PRRRRSHSRERGRRSRSTSKTRDKKK--EDKEKKRSKTPPKSYSTARR-SRSASRERRRR 194
Query: 241 SKRSGVSN--RPRAP 279
RSG + +PR+P
Sbjct: 195 RSRSGTRSPKKPRSP 209
>BC112350-1|AAI12351.1| 955|Homo sapiens THRAP3 protein protein.
Length = 955
Score = 31.9 bits (69), Expect = 1.7
Identities = 23/78 (29%), Positives = 34/78 (43%)
Frame = +1
Query: 61 PRRHRSVDRDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRL 240
PRR RS R K R S S+ ++ SDR SSS S + E +R+
Sbjct: 120 PRRGRSRSRSPKRRSPSPRSRSHSRNSDKSSSDRSR---RSSSSRSSSNHSRVESSKRKS 176
Query: 241 SKRSGVSNRPRAPTMQSG 294
+K S++ P+ +G
Sbjct: 177 AKEKKSSSKDSRPSQAAG 194
>BC112330-1|AAI12331.1| 955|Homo sapiens thyroid hormone receptor
associated protein 3 protein.
Length = 955
Score = 31.9 bits (69), Expect = 1.7
Identities = 23/78 (29%), Positives = 34/78 (43%)
Frame = +1
Query: 61 PRRHRSVDRDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRL 240
PRR RS R K R S S+ ++ SDR SSS S + E +R+
Sbjct: 120 PRRGRSRSRSPKRRSPSPRSRSHSRNSDKSSSDRSR---RSSSSRSSSNHSRVESSKRKS 176
Query: 241 SKRSGVSNRPRAPTMQSG 294
+K S++ P+ +G
Sbjct: 177 AKEKKSSSKDSRPSQAAG 194
>BC065519-1|AAH65519.1| 374|Homo sapiens THRAP3 protein protein.
Length = 374
Score = 31.9 bits (69), Expect = 1.7
Identities = 23/78 (29%), Positives = 34/78 (43%)
Frame = +1
Query: 61 PRRHRSVDRDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRL 240
PRR RS R K R S S+ ++ SDR SSS S + E +R+
Sbjct: 120 PRRGRSRSRSPKRRSPSPRSRSHSRNSDKSSSDRSR---RSSSSRSSSNHSRVESSKRKS 176
Query: 241 SKRSGVSNRPRAPTMQSG 294
+K S++ P+ +G
Sbjct: 177 AKEKKSSSKDSRPSQAAG 194
>BC054046-1|AAH54046.1| 373|Homo sapiens THRAP3 protein protein.
Length = 373
Score = 31.9 bits (69), Expect = 1.7
Identities = 23/78 (29%), Positives = 34/78 (43%)
Frame = +1
Query: 61 PRRHRSVDRDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRL 240
PRR RS R K R S S+ ++ SDR SSS S + E +R+
Sbjct: 120 PRRGRSRSRSPKRRSPSPRSRSHSRNSDKSSSDRSR---RSSSSRSSSNHSRVESSKRKS 176
Query: 241 SKRSGVSNRPRAPTMQSG 294
+K S++ P+ +G
Sbjct: 177 AKEKKSSSKDSRPSQAAG 194
>BC040436-1|AAH40436.1| 483|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 483
Score = 31.9 bits (69), Expect = 1.7
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +1
Query: 61 PRRHRSVDRDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRL 240
PRR RS R+ R ++ D + E +RS P S S + +R A RRR
Sbjct: 290 PRRRRSHSRERGRRSRSTSKTRDKKK--EDKEKKRSKTPPKSYSTARR-SRSASRERRRR 346
Query: 241 SKRSGVSN--RPRAP 279
RSG + +PR+P
Sbjct: 347 RSRSGTRSPKKPRSP 361
>BC037554-1|AAH37554.1| 672|Homo sapiens THRAP3 protein protein.
Length = 672
Score = 31.9 bits (69), Expect = 1.7
Identities = 23/78 (29%), Positives = 34/78 (43%)
Frame = +1
Query: 61 PRRHRSVDRDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRL 240
PRR RS R K R S S+ ++ SDR SSS S + E +R+
Sbjct: 120 PRRGRSRSRSPKRRSPSPRSRSHSRNSDKSSSDRSR---RSSSSRSSSNHSRVESSKRKS 176
Query: 241 SKRSGVSNRPRAPTMQSG 294
+K S++ P+ +G
Sbjct: 177 AKEKKSSSKDSRPSQAAG 194
>BC019076-1|AAH19076.1| 373|Homo sapiens Unknown (protein for
IMAGE:3834482) protein.
Length = 373
Score = 31.9 bits (69), Expect = 1.7
Identities = 23/78 (29%), Positives = 34/78 (43%)
Frame = +1
Query: 61 PRRHRSVDRDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRL 240
PRR RS R K R S S+ ++ SDR SSS S + E +R+
Sbjct: 120 PRRGRSRSRSPKRRSPSPRSRSHSRNSDKSSSDRSR---RSSSSRSSSNHSRVESSKRKS 176
Query: 241 SKRSGVSNRPRAPTMQSG 294
+K S++ P+ +G
Sbjct: 177 AKEKKSSSKDSRPSQAAG 194
>BC010997-1|AAH10997.1| 375|Homo sapiens THRAP3 protein protein.
Length = 375
Score = 31.9 bits (69), Expect = 1.7
Identities = 23/78 (29%), Positives = 34/78 (43%)
Frame = +1
Query: 61 PRRHRSVDRDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRL 240
PRR RS R K R S S+ ++ SDR SSS S + E +R+
Sbjct: 120 PRRGRSRSRSPKRRSPSPRSRSHSRNSDKSSSDRSR---RSSSSRSSSNHSRVESSKRKS 176
Query: 241 SKRSGVSNRPRAPTMQSG 294
+K S++ P+ +G
Sbjct: 177 AKEKKSSSKDSRPSQAAG 194
>BC002501-1|AAH02501.1| 375|Homo sapiens THRAP3 protein protein.
Length = 375
Score = 31.9 bits (69), Expect = 1.7
Identities = 23/78 (29%), Positives = 34/78 (43%)
Frame = +1
Query: 61 PRRHRSVDRDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRL 240
PRR RS R K R S S+ ++ SDR SSS S + E +R+
Sbjct: 120 PRRGRSRSRSPKRRSPSPRSRSHSRNSDKSSSDRSR---RSSSSRSSSNHSRVESSKRKS 176
Query: 241 SKRSGVSNRPRAPTMQSG 294
+K S++ P+ +G
Sbjct: 177 AKEKKSSSKDSRPSQAAG 194
>AL591845-1|CAH71859.1| 955|Homo sapiens thyroid hormone receptor
associated protein 3 protein.
Length = 955
Score = 31.9 bits (69), Expect = 1.7
Identities = 23/78 (29%), Positives = 34/78 (43%)
Frame = +1
Query: 61 PRRHRSVDRDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRL 240
PRR RS R K R S S+ ++ SDR SSS S + E +R+
Sbjct: 120 PRRGRSRSRSPKRRSPSPRSRSHSRNSDKSSSDRSR---RSSSSRSSSNHSRVESSKRKS 176
Query: 241 SKRSGVSNRPRAPTMQSG 294
+K S++ P+ +G
Sbjct: 177 AKEKKSSSKDSRPSQAAG 194
>AL353771-7|CAI22336.1| 424|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 424
Score = 31.9 bits (69), Expect = 1.7
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +1
Query: 61 PRRHRSVDRDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRL 240
PRR RS R+ R ++ D + E +RS P S S + +R A RRR
Sbjct: 230 PRRRRSHSRERGRRSRSTSKTRDKKK--EDKEKKRSKTPPKSYSTARR-SRSASRERRRR 286
Query: 241 SKRSGVSN--RPRAP 279
RSG + +PR+P
Sbjct: 287 RSRSGTRSPKKPRSP 301
>AL353771-6|CAI22335.1| 484|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 484
Score = 31.9 bits (69), Expect = 1.7
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +1
Query: 61 PRRHRSVDRDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRL 240
PRR RS R+ R ++ D + E +RS P S S + +R A RRR
Sbjct: 290 PRRRRSHSRERGRRSRSTSKTRDKKK--EDKEKKRSKTPPKSYSTARR-SRSASRERRRR 346
Query: 241 SKRSGVSN--RPRAP 279
RSG + +PR+P
Sbjct: 347 RSRSGTRSPKKPRSP 361
>AL353771-5|CAI22334.1| 483|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 483
Score = 31.9 bits (69), Expect = 1.7
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +1
Query: 61 PRRHRSVDRDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRL 240
PRR RS R+ R ++ D + E +RS P S S + +R A RRR
Sbjct: 290 PRRRRSHSRERGRRSRSTSKTRDKKK--EDKEKKRSKTPPKSYSTARR-SRSASRERRRR 346
Query: 241 SKRSGVSN--RPRAP 279
RSG + +PR+P
Sbjct: 347 RSRSGTRSPKKPRSP 361
>AF117756-1|AAD22034.1| 955|Homo sapiens thyroid hormone
receptor-associated protein complex component TRAP150
protein.
Length = 955
Score = 31.9 bits (69), Expect = 1.7
Identities = 23/78 (29%), Positives = 34/78 (43%)
Frame = +1
Query: 61 PRRHRSVDRDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRL 240
PRR RS R K R S S+ ++ SDR SSS S + E +R+
Sbjct: 120 PRRGRSRSRSPKRRSPSPRSRSHSRNSDKSSSDRSR---RSSSSRSSSNHSRVESSKRKS 176
Query: 241 SKRSGVSNRPRAPTMQSG 294
+K S++ P+ +G
Sbjct: 177 AKEKKSSSKDSRPSQAAG 194
>BC053992-1|AAH53992.1| 1312|Homo sapiens SR-related CTD-associated
factor 1 protein.
Length = 1312
Score = 31.5 bits (68), Expect = 2.2
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +1
Query: 64 RRHRSVDRDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRR 237
++HRS DR + AR S++ + S RR D G +R E+RRRR
Sbjct: 553 KKHRSRDRKPGSHASSSARRR-SRSRSRSRSTRRRSRSTDRRRGGSRRSRSREKRRRR 609
>AK024444-1|BAB15734.1| 1343|Homo sapiens FLJ00034 protein protein.
Length = 1343
Score = 31.5 bits (68), Expect = 2.2
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +1
Query: 64 RRHRSVDRDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRR 237
++HRS DR + AR S++ + S RR D G +R E+RRRR
Sbjct: 584 KKHRSRDRKPGSHASSSARRR-SRSRSRSRSTRRRSRSTDRRRGGSRRSRSREKRRRR 640
>AF254411-1|AAF87552.1| 1312|Homo sapiens ser/arg-rich pre-mRNA
splicing factor SR-A1 protein.
Length = 1312
Score = 31.5 bits (68), Expect = 2.2
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +1
Query: 64 RRHRSVDRDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRR 237
++HRS DR + AR S++ + S RR D G +R E+RRRR
Sbjct: 553 KKHRSRDRKPGSHASSSARRR-SRSRSRSRSTRRRSRSTDRRRGGSRRSRSREKRRRR 609
>BC113477-1|AAI13478.1| 636|Homo sapiens potassium voltage-gated
channel, Shal-related subfamily, member 3 protein.
Length = 636
Score = 31.1 bits (67), Expect = 2.9
Identities = 24/77 (31%), Positives = 35/77 (45%)
Frame = +1
Query: 343 PPKNAPKHQLGDDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNERGEYEV 522
P A K++ D+ I L V RF + +P+T+LG S+ EF + EY
Sbjct: 28 PLAPADKNKRQDELIVLNVSGRRFQTWRTTLERYPDTLLG---STEKEFFFNEDTKEYFF 84
Query: 523 AEGISATVFRAILEYYR 573
VFR +L +YR
Sbjct: 85 DR--DPEVFRCVLNFYR 99
>BC113475-1|AAI13476.1| 636|Homo sapiens potassium voltage-gated
channel, Shal-related subfamily, member 3 protein.
Length = 636
Score = 31.1 bits (67), Expect = 2.9
Identities = 24/77 (31%), Positives = 35/77 (45%)
Frame = +1
Query: 343 PPKNAPKHQLGDDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNERGEYEV 522
P A K++ D+ I L V RF + +P+T+LG S+ EF + EY
Sbjct: 28 PLAPADKNKRQDELIVLNVSGRRFQTWRTTLERYPDTLLG---STEKEFFFNEDTKEYFF 84
Query: 523 AEGISATVFRAILEYYR 573
VFR +L +YR
Sbjct: 85 DR--DPEVFRCVLNFYR 99
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 31.1 bits (67), Expect = 2.9
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 61 PRRHRSVDRDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRL 240
PRR RS R + RG H+R + + S+R++ +S N E ++ R+
Sbjct: 697 PRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKN--KSRTSQRRSRSNSSPEMKKSRI 754
Query: 241 -SKRSGVSNRPRA 276
S+RS + PR+
Sbjct: 755 SSRRSRSLSSPRS 767
>AL512665-2|CAI16955.1| 636|Homo sapiens potassium voltage-gated
channel, Shal-related subfamily, member 3 protein.
Length = 636
Score = 31.1 bits (67), Expect = 2.9
Identities = 24/77 (31%), Positives = 35/77 (45%)
Frame = +1
Query: 343 PPKNAPKHQLGDDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNERGEYEV 522
P A K++ D+ I L V RF + +P+T+LG S+ EF + EY
Sbjct: 28 PLAPADKNKRQDELIVLNVSGRRFQTWRTTLERYPDTLLG---STEKEFFFNEDTKEYFF 84
Query: 523 AEGISATVFRAILEYYR 573
VFR +L +YR
Sbjct: 85 DR--DPEVFRCVLNFYR 99
>AL512665-1|CAI16956.1| 655|Homo sapiens potassium voltage-gated
channel, Shal-related subfamily, member 3 protein.
Length = 655
Score = 31.1 bits (67), Expect = 2.9
Identities = 24/77 (31%), Positives = 35/77 (45%)
Frame = +1
Query: 343 PPKNAPKHQLGDDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNERGEYEV 522
P A K++ D+ I L V RF + +P+T+LG S+ EF + EY
Sbjct: 28 PLAPADKNKRQDELIVLNVSGRRFQTWRTTLERYPDTLLG---STEKEFFFNEDTKEYFF 84
Query: 523 AEGISATVFRAILEYYR 573
VFR +L +YR
Sbjct: 85 DR--DPEVFRCVLNFYR 99
>AL450997-2|CAI19097.1| 636|Homo sapiens potassium voltage-gated
channel, Shal-related subfamily, member 3 protein.
Length = 636
Score = 31.1 bits (67), Expect = 2.9
Identities = 24/77 (31%), Positives = 35/77 (45%)
Frame = +1
Query: 343 PPKNAPKHQLGDDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNERGEYEV 522
P A K++ D+ I L V RF + +P+T+LG S+ EF + EY
Sbjct: 28 PLAPADKNKRQDELIVLNVSGRRFQTWRTTLERYPDTLLG---STEKEFFFNEDTKEYFF 84
Query: 523 AEGISATVFRAILEYYR 573
VFR +L +YR
Sbjct: 85 DR--DPEVFRCVLNFYR 99
>AL450997-1|CAI19096.1| 655|Homo sapiens potassium voltage-gated
channel, Shal-related subfamily, member 3 protein.
Length = 655
Score = 31.1 bits (67), Expect = 2.9
Identities = 24/77 (31%), Positives = 35/77 (45%)
Frame = +1
Query: 343 PPKNAPKHQLGDDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNERGEYEV 522
P A K++ D+ I L V RF + +P+T+LG S+ EF + EY
Sbjct: 28 PLAPADKNKRQDELIVLNVSGRRFQTWRTTLERYPDTLLG---STEKEFFFNEDTKEYFF 84
Query: 523 AEGISATVFRAILEYYR 573
VFR +L +YR
Sbjct: 85 DR--DPEVFRCVLNFYR 99
>AL049557-3|CAB55687.2| 636|Homo sapiens potassium voltage-gated
channel, Shal-related subfamily, member 3 protein.
Length = 636
Score = 31.1 bits (67), Expect = 2.9
Identities = 24/77 (31%), Positives = 35/77 (45%)
Frame = +1
Query: 343 PPKNAPKHQLGDDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNERGEYEV 522
P A K++ D+ I L V RF + +P+T+LG S+ EF + EY
Sbjct: 28 PLAPADKNKRQDELIVLNVSGRRFQTWRTTLERYPDTLLG---STEKEFFFNEDTKEYFF 84
Query: 523 AEGISATVFRAILEYYR 573
VFR +L +YR
Sbjct: 85 DR--DPEVFRCVLNFYR 99
>AL049557-2|CAI22711.1| 655|Homo sapiens potassium voltage-gated
channel, Shal-related subfamily, member 3 protein.
Length = 655
Score = 31.1 bits (67), Expect = 2.9
Identities = 24/77 (31%), Positives = 35/77 (45%)
Frame = +1
Query: 343 PPKNAPKHQLGDDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNERGEYEV 522
P A K++ D+ I L V RF + +P+T+LG S+ EF + EY
Sbjct: 28 PLAPADKNKRQDELIVLNVSGRRFQTWRTTLERYPDTLLG---STEKEFFFNEDTKEYFF 84
Query: 523 AEGISATVFRAILEYYR 573
VFR +L +YR
Sbjct: 85 DR--DPEVFRCVLNFYR 99
>AF205857-1|AAF20925.1| 655|Homo sapiens potassium ionic channel
Kv4.3 long isoform protein.
Length = 655
Score = 31.1 bits (67), Expect = 2.9
Identities = 24/77 (31%), Positives = 35/77 (45%)
Frame = +1
Query: 343 PPKNAPKHQLGDDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNERGEYEV 522
P A K++ D+ I L V RF + +P+T+LG S+ EF + EY
Sbjct: 28 PLAPADKNKRQDELIVLNVSGRRFQTWRTTLERYPDTLLG---STEKEFFFNEDTKEYFF 84
Query: 523 AEGISATVFRAILEYYR 573
VFR +L +YR
Sbjct: 85 DR--DPEVFRCVLNFYR 99
>AF205856-1|AAF20924.1| 636|Homo sapiens potassium ionic channel
Kv4.3 short isoform protein.
Length = 636
Score = 31.1 bits (67), Expect = 2.9
Identities = 24/77 (31%), Positives = 35/77 (45%)
Frame = +1
Query: 343 PPKNAPKHQLGDDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNERGEYEV 522
P A K++ D+ I L V RF + +P+T+LG S+ EF + EY
Sbjct: 28 PLAPADKNKRQDELIVLNVSGRRFQTWRTTLERYPDTLLG---STEKEFFFNEDTKEYFF 84
Query: 523 AEGISATVFRAILEYYR 573
VFR +L +YR
Sbjct: 85 DR--DPEVFRCVLNFYR 99
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator
subunit SRm300 protein.
Length = 2296
Score = 31.1 bits (67), Expect = 2.9
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 61 PRRHRSVDRDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRL 240
PRR RS R + RG H+R + + S+R++ +S N E ++ R+
Sbjct: 697 PRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKN--KSRTSQRRSRSNSSPEMKKSRI 754
Query: 241 -SKRSGVSNRPRA 276
S+RS + PR+
Sbjct: 755 SSRRSRSLSSPRS 767
>AF187964-1|AAF01045.1| 636|Homo sapiens voltage gated potassium
channel Kv4.3 short splice variant protein.
Length = 636
Score = 31.1 bits (67), Expect = 2.9
Identities = 24/77 (31%), Positives = 35/77 (45%)
Frame = +1
Query: 343 PPKNAPKHQLGDDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNERGEYEV 522
P A K++ D+ I L V RF + +P+T+LG S+ EF + EY
Sbjct: 28 PLAPADKNKRQDELIVLNVSGRRFQTWRTTLERYPDTLLG---STEKEFFFNEDTKEYFF 84
Query: 523 AEGISATVFRAILEYYR 573
VFR +L +YR
Sbjct: 85 DR--DPEVFRCVLNFYR 99
>AF187963-1|AAF01044.1| 655|Homo sapiens voltage gated potassium
channel Kv4.3 long splice variant protein.
Length = 655
Score = 31.1 bits (67), Expect = 2.9
Identities = 24/77 (31%), Positives = 35/77 (45%)
Frame = +1
Query: 343 PPKNAPKHQLGDDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNERGEYEV 522
P A K++ D+ I L V RF + +P+T+LG S+ EF + EY
Sbjct: 28 PLAPADKNKRQDELIVLNVSGRRFQTWRTTLERYPDTLLG---STEKEFFFNEDTKEYFF 84
Query: 523 AEGISATVFRAILEYYR 573
VFR +L +YR
Sbjct: 85 DR--DPEVFRCVLNFYR 99
>AF166011-2|AAF68178.1| 636|Homo sapiens voltage-gated potassium
channel Kv4.3 short variant protein.
Length = 636
Score = 31.1 bits (67), Expect = 2.9
Identities = 24/77 (31%), Positives = 35/77 (45%)
Frame = +1
Query: 343 PPKNAPKHQLGDDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNERGEYEV 522
P A K++ D+ I L V RF + +P+T+LG S+ EF + EY
Sbjct: 28 PLAPADKNKRQDELIVLNVSGRRFQTWRTTLERYPDTLLG---STEKEFFFNEDTKEYFF 84
Query: 523 AEGISATVFRAILEYYR 573
VFR +L +YR
Sbjct: 85 DR--DPEVFRCVLNFYR 99
>AF166011-1|AAF68177.1| 655|Homo sapiens voltage-gated potassium
channel Kv4.3 long variant protein.
Length = 655
Score = 31.1 bits (67), Expect = 2.9
Identities = 24/77 (31%), Positives = 35/77 (45%)
Frame = +1
Query: 343 PPKNAPKHQLGDDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNERGEYEV 522
P A K++ D+ I L V RF + +P+T+LG S+ EF + EY
Sbjct: 28 PLAPADKNKRQDELIVLNVSGRRFQTWRTTLERYPDTLLG---STEKEFFFNEDTKEYFF 84
Query: 523 AEGISATVFRAILEYYR 573
VFR +L +YR
Sbjct: 85 DR--DPEVFRCVLNFYR 99
>AF120491-1|AAD38898.1| 655|Homo sapiens Sha1-related potassium
channel Kv4.3 protein.
Length = 655
Score = 31.1 bits (67), Expect = 2.9
Identities = 24/77 (31%), Positives = 35/77 (45%)
Frame = +1
Query: 343 PPKNAPKHQLGDDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNERGEYEV 522
P A K++ D+ I L V RF + +P+T+LG S+ EF + EY
Sbjct: 28 PLAPADKNKRQDELIVLNVSGRRFQTWRTTLERYPDTLLG---STEKEFFFNEDTKEYFF 84
Query: 523 AEGISATVFRAILEYYR 573
VFR +L +YR
Sbjct: 85 DR--DPEVFRCVLNFYR 99
>AF048713-1|AAC05122.1| 655|Homo sapiens Kv4.3 potassium channel
long splice variant protein.
Length = 655
Score = 31.1 bits (67), Expect = 2.9
Identities = 24/77 (31%), Positives = 35/77 (45%)
Frame = +1
Query: 343 PPKNAPKHQLGDDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNERGEYEV 522
P A K++ D+ I L V RF + +P+T+LG S+ EF + EY
Sbjct: 28 PLAPADKNKRQDELIVLNVSGRRFQTWRTTLERYPDTLLG---STEKEFFFNEDTKEYFF 84
Query: 523 AEGISATVFRAILEYYR 573
VFR +L +YR
Sbjct: 85 DR--DPEVFRCVLNFYR 99
>AF048712-1|AAC05121.1| 636|Homo sapiens Kv4.3 potassium channel
short splice variant protein.
Length = 636
Score = 31.1 bits (67), Expect = 2.9
Identities = 24/77 (31%), Positives = 35/77 (45%)
Frame = +1
Query: 343 PPKNAPKHQLGDDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNERGEYEV 522
P A K++ D+ I L V RF + +P+T+LG S+ EF + EY
Sbjct: 28 PLAPADKNKRQDELIVLNVSGRRFQTWRTTLERYPDTLLG---STEKEFFFNEDTKEYFF 84
Query: 523 AEGISATVFRAILEYYR 573
VFR +L +YR
Sbjct: 85 DR--DPEVFRCVLNFYR 99
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 31.1 bits (67), Expect = 2.9
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 61 PRRHRSVDRDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRL 240
PRR RS R + RG H+R + + S+R++ +S N E ++ R+
Sbjct: 697 PRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKN--KSRTSQRRSRSNSSPEMKKSRI 754
Query: 241 -SKRSGVSNRPRA 276
S+RS + PR+
Sbjct: 755 SSRRSRSLSSPRS 767
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 31.1 bits (67), Expect = 2.9
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 61 PRRHRSVDRDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRL 240
PRR RS R + RG H+R + + S+R++ +S N E ++ R+
Sbjct: 662 PRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKN--KSRTSQRRSRSNSSPEMKKSRI 719
Query: 241 -SKRSGVSNRPRA 276
S+RS + PR+
Sbjct: 720 SSRRSRSLSSPRS 732
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 31.1 bits (67), Expect = 2.9
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 61 PRRHRSVDRDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRL 240
PRR RS R + RG H+R + + S+R++ +S N E ++ R+
Sbjct: 487 PRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKN--KSRTSQRRSRSNSSPEMKKSRI 544
Query: 241 -SKRSGVSNRPRA 276
S+RS + PR+
Sbjct: 545 SSRRSRSLSSPRS 557
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 31.1 bits (67), Expect = 2.9
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 61 PRRHRSVDRDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRL 240
PRR RS R + RG H+R + + S+R++ +S N E ++ R+
Sbjct: 745 PRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKN--KSRTSQRRSRSNSSPEMKKSRI 802
Query: 241 -SKRSGVSNRPRA 276
S+RS + PR+
Sbjct: 803 SSRRSRSLSSPRS 815
>BC110450-1|AAI10451.1| 630|Homo sapiens potassium voltage-gated
channel, Shal-related subfamily, member 2 protein.
Length = 630
Score = 30.7 bits (66), Expect = 3.9
Identities = 25/77 (32%), Positives = 35/77 (45%)
Frame = +1
Query: 343 PPKNAPKHQLGDDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNERGEYEV 522
PP+ K + D I L V TRF +P+T+LG SS +F + E +Y
Sbjct: 30 PPRQERK-RTQDALIVLNVSGTRFQTWQDTLERYPDTLLG---SSERDFFYHPETQQYFF 85
Query: 523 AEGISATVFRAILEYYR 573
+FR IL +YR
Sbjct: 86 DR--DPDIFRHILNFYR 100
>BC110449-1|AAI10450.1| 630|Homo sapiens potassium voltage-gated
channel, Shal-related subfamily, member 2 protein.
Length = 630
Score = 30.7 bits (66), Expect = 3.9
Identities = 25/77 (32%), Positives = 35/77 (45%)
Frame = +1
Query: 343 PPKNAPKHQLGDDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNERGEYEV 522
PP+ K + D I L V TRF +P+T+LG SS +F + E +Y
Sbjct: 30 PPRQERK-RTQDALIVLNVSGTRFQTWQDTLERYPDTLLG---SSERDFFYHPETQQYFF 85
Query: 523 AEGISATVFRAILEYYR 573
+FR IL +YR
Sbjct: 86 DR--DPDIFRHILNFYR 100
>AJ010969-1|CAB56841.1| 630|Homo sapiens potassium channel Kv4.2
protein.
Length = 630
Score = 30.7 bits (66), Expect = 3.9
Identities = 25/77 (32%), Positives = 35/77 (45%)
Frame = +1
Query: 343 PPKNAPKHQLGDDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNERGEYEV 522
PP+ K + D I L V TRF +P+T+LG SS +F + E +Y
Sbjct: 30 PPRQERK-RTQDALIVLNVSGTRFQTWQDTLERYPDTLLG---SSERDFFYHPETQQYFF 85
Query: 523 AEGISATVFRAILEYYR 573
+FR IL +YR
Sbjct: 86 DR--DPDIFRHILNFYR 100
>AF166008-1|AAF65618.1| 630|Homo sapiens voltage-gated potassium
channel Kv4.2 protein.
Length = 630
Score = 30.7 bits (66), Expect = 3.9
Identities = 25/77 (32%), Positives = 35/77 (45%)
Frame = +1
Query: 343 PPKNAPKHQLGDDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNERGEYEV 522
PP+ K + D I L V TRF +P+T+LG SS +F + E +Y
Sbjct: 30 PPRQERK-RTQDALIVLNVSGTRFQTWQDTLERYPDTLLG---SSERDFFYHPETQQYFF 85
Query: 523 AEGISATVFRAILEYYR 573
+FR IL +YR
Sbjct: 86 DR--DPDIFRHILNFYR 100
>AF142568-1|AAD52159.1| 372|Homo sapiens voltage-gated potassium
channel protein KV4.2 protein.
Length = 372
Score = 30.7 bits (66), Expect = 3.9
Identities = 25/77 (32%), Positives = 35/77 (45%)
Frame = +1
Query: 343 PPKNAPKHQLGDDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNERGEYEV 522
PP+ K + D I L V TRF +P+T+LG SS +F + E +Y
Sbjct: 30 PPRQERK-RTQDALIVLNVSGTRFQTWQDTLERYPDTLLG---SSERDFFYHPETQQYFF 85
Query: 523 AEGISATVFRAILEYYR 573
+FR IL +YR
Sbjct: 86 DR--DPDIFRHILNFYR 100
>AF121104-1|AAD22053.1| 630|Homo sapiens potassium channel KV4.2
protein.
Length = 630
Score = 30.7 bits (66), Expect = 3.9
Identities = 25/77 (32%), Positives = 35/77 (45%)
Frame = +1
Query: 343 PPKNAPKHQLGDDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNERGEYEV 522
PP+ K + D I L V TRF +P+T+LG SS +F + E +Y
Sbjct: 30 PPRQERK-RTQDALIVLNVSGTRFQTWQDTLERYPDTLLG---SSERDFFYHPETQQYFF 85
Query: 523 AEGISATVFRAILEYYR 573
+FR IL +YR
Sbjct: 86 DR--DPDIFRHILNFYR 100
>AC092020-1|AAS07530.1| 372|Homo sapiens unknown protein.
Length = 372
Score = 30.7 bits (66), Expect = 3.9
Identities = 25/77 (32%), Positives = 35/77 (45%)
Frame = +1
Query: 343 PPKNAPKHQLGDDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNERGEYEV 522
PP+ K + D I L V TRF +P+T+LG SS +F + E +Y
Sbjct: 30 PPRQERK-RTQDALIVLNVSGTRFQTWQDTLERYPDTLLG---SSERDFFYHPETQQYFF 85
Query: 523 AEGISATVFRAILEYYR 573
+FR IL +YR
Sbjct: 86 DR--DPDIFRHILNFYR 100
>AB028967-1|BAA82996.2| 646|Homo sapiens KIAA1044 protein protein.
Length = 646
Score = 30.7 bits (66), Expect = 3.9
Identities = 25/77 (32%), Positives = 35/77 (45%)
Frame = +1
Query: 343 PPKNAPKHQLGDDRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNERGEYEV 522
PP+ K + D I L V TRF +P+T+LG SS +F + E +Y
Sbjct: 46 PPRQERK-RTQDALIVLNVSGTRFQTWQDTLERYPDTLLG---SSERDFFYHPETQQYFF 101
Query: 523 AEGISATVFRAILEYYR 573
+FR IL +YR
Sbjct: 102 DR--DPDIFRHILNFYR 116
>BC057834-1|AAH57834.1| 58|Homo sapiens LOC388969 protein protein.
Length = 58
Score = 30.3 bits (65), Expect = 5.1
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = -2
Query: 199 PSHCCYQDRKTTCDHSLPHHVPESQ-TYARARLRELLHH 86
P HCC + +H HH+ +Q R LR HH
Sbjct: 9 PGHCCKPGGRLDMNHGFVHHIRRNQIARYRPALRRRRHH 47
>BC036058-1|AAH36058.1| 260|Homo sapiens potassium channel
tetramerisation domain containing 21 protein.
Length = 260
Score = 29.9 bits (64), Expect = 6.8
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = +1
Query: 379 DRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNERGEYEVAEGISATVFRAI 558
D ITL V + + T+ P++MLG MFS + T + +G + VFR I
Sbjct: 3 DPITLNVGGKLYTTSLATLTSFPDSMLGAMFSGKMP-TKRDSQGNCFIDR--DGKVFRYI 59
Query: 559 LEYYR 573
L + R
Sbjct: 60 LNFLR 64
>AK074934-1|BAC11301.1| 237|Homo sapiens protein ( Homo sapiens
cDNA FLJ90453 fis, clone NT2RP3001542, highly similar to
Potassium channel tetramerisation domain containing 6.
).
Length = 237
Score = 29.9 bits (64), Expect = 6.8
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +1
Query: 379 DRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSSGIEFTHPNERGEYEVAEGISATVFRAI 558
D +TL V + + T +P++MLG MF T + +G Y + +FR +
Sbjct: 12 DPVTLNVGGHLYTTSLTTLTRYPDSMLGAMFGGDFPTTR-DPQGNYFINR--DGPLFRYV 68
Query: 559 LEYYR 573
L + R
Sbjct: 69 LNFLR 73
>X99897-1|CAA68172.1| 2262|Homo sapiens calcium channel alpha1 subunit
protein.
Length = 2262
Score = 29.5 bits (63), Expect = 9.0
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 537 GDTFSYFIFASFIWMCKF 484
G+ F+YF F SFI++C F
Sbjct: 1784 GNEFAYFYFVSFIFLCSF 1801
>U79668-1|AAB49678.1| 916|Homo sapiens alpha1A-voltage-dependent
calcium channel protein.
Length = 916
Score = 29.5 bits (63), Expect = 9.0
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 537 GDTFSYFIFASFIWMCKF 484
G+ F+YF F SFI++C F
Sbjct: 471 GNEFAYFYFVSFIFLCSF 488
>U79667-1|AAB49677.1| 1182|Homo sapiens alpha1A-voltage-dependent
calcium channel protein.
Length = 1182
Score = 29.5 bits (63), Expect = 9.0
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 537 GDTFSYFIFASFIWMCKF 484
G+ F+YF F SFI++C F
Sbjct: 471 GNEFAYFYFVSFIFLCSF 488
>U79666-1|AAB64179.1| 2505|Homo sapiens alpha1A-voltage-dependent
calcium channel protein.
Length = 2505
Score = 29.5 bits (63), Expect = 9.0
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 537 GDTFSYFIFASFIWMCKF 484
G+ F+YF F SFI++C F
Sbjct: 1783 GNEFAYFYFVSFIFLCSF 1800
>U79665-1|AAB49676.1| 1194|Homo sapiens alpha1A-voltage-sensitive
calcium channel protein.
Length = 1194
Score = 29.5 bits (63), Expect = 9.0
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 537 GDTFSYFIFASFIWMCKF 484
G+ F+YF F SFI++C F
Sbjct: 471 GNEFAYFYFVSFIFLCSF 488
>U79664-1|AAB49675.1| 949|Homo sapiens alpha1A-voltage-dependent
calcium channel protein.
Length = 949
Score = 29.5 bits (63), Expect = 9.0
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 537 GDTFSYFIFASFIWMCKF 484
G+ F+YF F SFI++C F
Sbjct: 471 GNEFAYFYFVSFIFLCSF 488
>U79663-1|AAB49674.1| 949|Homo sapiens alpha1A-voltage-dependent
calcium channel protein.
Length = 949
Score = 29.5 bits (63), Expect = 9.0
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 537 GDTFSYFIFASFIWMCKF 484
G+ F+YF F SFI++C F
Sbjct: 471 GNEFAYFYFVSFIFLCSF 488
>S76537-1|AAB33068.1| 115|Homo sapiens P-type voltage-gated calcium
channel alpha 1 protein.
Length = 115
Score = 29.5 bits (63), Expect = 9.0
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 537 GDTFSYFIFASFIWMCKF 484
G+ F+YF F SFI++C F
Sbjct: 91 GNEFAYFYFVSFIFLCSF 108
>BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 29.5 bits (63), Expect = 9.0
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = +1
Query: 58 PPRRHRSVDRDVKARGDE--HARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERR 231
P R D DV + ++ + D H ++ D + S G E +RD ER
Sbjct: 238 PELAQRGHDDDVSSTSEDDGYPEDMDQDKHDDSTDDSDTDKSDGESDGDEFVHRDNGERD 297
Query: 232 RRLSKRSGVSNR 267
K+SG+S R
Sbjct: 298 NNEEKKSGLSVR 309
>BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 29.5 bits (63), Expect = 9.0
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = +1
Query: 58 PPRRHRSVDRDVKARGDE--HARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERR 231
P R D DV + ++ + D H ++ D + S G E +RD ER
Sbjct: 238 PELAQRGHDDDVSSTSEDDGYPEDMDQDKHDDSTDDSDTDKSDGESDGDEFVHRDNGERD 297
Query: 232 RRLSKRSGVSNR 267
K+SG+S R
Sbjct: 298 NNEEKKSGLSVR 309
>AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding protein
SNP70 protein.
Length = 641
Score = 29.5 bits (63), Expect = 9.0
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = +1
Query: 58 PPRRHRSVDRDVKARGDE--HARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERR 231
P R D DV + ++ + D H ++ D + S G E +RD ER
Sbjct: 238 PELAQRGHDDDVSSTSEDDGYPEDMDQDKHDDSTDDSDTDKSDGESDGDEFVHRDNGERD 297
Query: 232 RRLSKRSGVSNR 267
K+SG+S R
Sbjct: 298 NNEEKKSGLSVR 309
>AF100774-1|AAC77460.1| 980|Homo sapiens voltage-dependent P/Q type
calcium channel alpha 1A subunit protein.
Length = 980
Score = 29.5 bits (63), Expect = 9.0
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 537 GDTFSYFIFASFIWMCKF 484
G+ F+YF F SFI++C F
Sbjct: 269 GNEFAYFYFVSFIFLCSF 286
>AF004884-1|AAB61613.1| 2510|Homo sapiens neuronal calcium channel
alpha 1A subunit isoform A-1 protein.
Length = 2510
Score = 29.5 bits (63), Expect = 9.0
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 537 GDTFSYFIFASFIWMCKF 484
G+ F+YF F SFI++C F
Sbjct: 1788 GNEFAYFYFVSFIFLCSF 1805
>AF004883-1|AAB61612.1| 2266|Homo sapiens neuronal calcium channel
alpha 1A subunit isoform 1A-2 protein.
Length = 2266
Score = 29.5 bits (63), Expect = 9.0
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 537 GDTFSYFIFASFIWMCKF 484
G+ F+YF F SFI++C F
Sbjct: 1788 GNEFAYFYFVSFIFLCSF 1805
>AB035727-1|BAA94766.2| 2506|Homo sapiens alpha1A-voltage-dependent
calcium channel protein.
Length = 2506
Score = 29.5 bits (63), Expect = 9.0
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 537 GDTFSYFIFASFIWMCKF 484
G+ F+YF F SFI++C F
Sbjct: 1782 GNEFAYFYFVSFIFLCSF 1799
>AB035726-1|BAA94765.1| 2472|Homo sapiens alpha1A-voltage-dependent
calcium channel protein.
Length = 2472
Score = 29.5 bits (63), Expect = 9.0
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 537 GDTFSYFIFASFIWMCKF 484
G+ F+YF F SFI++C F
Sbjct: 1783 GNEFAYFYFVSFIFLCSF 1800
>AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein
NpwBP protein.
Length = 641
Score = 29.5 bits (63), Expect = 9.0
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = +1
Query: 58 PPRRHRSVDRDVKARGDE--HARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERR 231
P R D DV + ++ + D H ++ D + S G E +RD ER
Sbjct: 238 PELAQRGHDDDVSSTSEDDGYPEDMDQDKHDDSTDDSDTDKSDGESDGDEFVHRDNGERD 297
Query: 232 RRLSKRSGVSNR 267
K+SG+S R
Sbjct: 298 NNEEKKSGLSVR 309
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.315 0.130 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,694,595
Number of Sequences: 237096
Number of extensions: 1740210
Number of successful extensions: 4743
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 4452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4738
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5985693436
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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