Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11g18
(578 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41533-11|AAO38614.1| 387|Caenorhabditis elegans Hypothetical p... 73 1e-13
U41533-10|AAA83172.1| 491|Caenorhabditis elegans Hypothetical p... 73 1e-13
U41533-8|AAA83171.2| 588|Caenorhabditis elegans Hypothetical pr... 73 1e-13
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 33 0.19
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 33 0.19
AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical ... 33 0.19
Z70780-4|CAD54137.2| 786|Caenorhabditis elegans Hypothetical pr... 31 0.78
AF077529-5|AAN60534.1| 756|Caenorhabditis elegans Hypothetical ... 30 1.0
AF077529-4|AAC26255.2| 783|Caenorhabditis elegans Hypothetical ... 30 1.0
Z70780-5|CAD91633.1| 779|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z70780-3|CAA94828.2| 828|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z66567-9|CAA91495.1| 1268|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z66562-7|CAA91467.1| 1268|Caenorhabditis elegans Hypothetical pr... 28 4.2
X65055-1|CAA46191.1| 1254|Caenorhabditis elegans P-glycoprotein ... 28 4.2
U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z68227-18|CAA92521.1| 869|Caenorhabditis elegans Hypothetical p... 28 5.5
Z68220-11|CAA92493.1| 869|Caenorhabditis elegans Hypothetical p... 28 5.5
U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical p... 28 5.5
U55374-7|AAP82641.1| 286|Caenorhabditis elegans Uncoordinated p... 28 5.5
U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated p... 28 5.5
U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p... 28 5.5
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ... 28 5.5
Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z46381-9|CAI58660.1| 807|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z46381-8|CAA86517.2| 808|Caenorhabditis elegans Hypothetical pr... 27 9.6
U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily ass... 27 9.6
AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical ... 27 9.6
>U41533-11|AAO38614.1| 387|Caenorhabditis elegans Hypothetical
protein R05F9.1c protein.
Length = 387
Score = 72.9 bits (171), Expect = 1e-13
Identities = 35/72 (48%), Positives = 50/72 (69%), Gaps = 7/72 (9%)
Frame = +1
Query: 379 DRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSS-------GIEFTHPNERGEYEVAEGIS 537
D++ L+VD TRF+V T+ P+TMLGRMFS G + PNER E+EVA+G++
Sbjct: 31 DKVCLLVDQTRFLVSQRLLTSKPDTMLGRMFSMRASCGDLGADLVSPNERDEFEVADGMT 90
Query: 538 ATVFRAILEYYR 573
++ FRAIL+YY+
Sbjct: 91 SSCFRAILDYYQ 102
>U41533-10|AAA83172.1| 491|Caenorhabditis elegans Hypothetical
protein R05F9.1a protein.
Length = 491
Score = 72.9 bits (171), Expect = 1e-13
Identities = 35/72 (48%), Positives = 50/72 (69%), Gaps = 7/72 (9%)
Frame = +1
Query: 379 DRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSS-------GIEFTHPNERGEYEVAEGIS 537
D++ L+VD TRF+V T+ P+TMLGRMFS G + PNER E+EVA+G++
Sbjct: 135 DKVCLLVDQTRFLVSQRLLTSKPDTMLGRMFSMRASCGDLGADLVSPNERDEFEVADGMT 194
Query: 538 ATVFRAILEYYR 573
++ FRAIL+YY+
Sbjct: 195 SSCFRAILDYYQ 206
>U41533-8|AAA83171.2| 588|Caenorhabditis elegans Hypothetical
protein R05F9.1b protein.
Length = 588
Score = 72.9 bits (171), Expect = 1e-13
Identities = 35/72 (48%), Positives = 50/72 (69%), Gaps = 7/72 (9%)
Frame = +1
Query: 379 DRITLVVDNTRFVVDPSQFTAHPNTMLGRMFSS-------GIEFTHPNERGEYEVAEGIS 537
D++ L+VD TRF+V T+ P+TMLGRMFS G + PNER E+EVA+G++
Sbjct: 232 DKVCLLVDQTRFLVSQRLLTSKPDTMLGRMFSMRASCGDLGADLVSPNERDEFEVADGMT 291
Query: 538 ATVFRAILEYYR 573
++ FRAIL+YY+
Sbjct: 292 SSCFRAILDYYQ 303
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 32.7 bits (71), Expect = 0.19
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +1
Query: 64 RRHRSVDRDVKARGDEHARMSD---SQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRR 234
++ RSV+++ R DEH R D + + D RS S + RD ++ RR
Sbjct: 533 KKRRSVEKERPRRADEHRRDRDRDRERDRDRSHRDVRSSGRSKDIKASSSHRRDRDDARR 592
Query: 235 RLSKRSGVSNRPR 273
+ +R V + R
Sbjct: 593 KDRRRDDVRKKER 605
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 32.7 bits (71), Expect = 0.19
Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +1
Query: 94 KARGDEHARMSDSQAHGEAMS---DRRSFFYPDSSSGSEEYNRDAEERRRRLSKRSGVSN 264
++R + AR S S+ H A S +RR S S S E R +RR R RS +
Sbjct: 1512 RSRSRDRARRSRSREHKRARSRSAERRRRSRTRSRSRSRERYRSRRDRRSRTKSRSRSRS 1571
Query: 265 RPRAPTMQ 288
R AP Q
Sbjct: 1572 REAAPPPQ 1579
>AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical
protein C51G7.3 protein.
Length = 754
Score = 32.7 bits (71), Expect = 0.19
Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +1
Query: 94 KARGDEHARMSDSQAHGEAMS---DRRSFFYPDSSSGSEEYNRDAEERRRRLSKRSGVSN 264
++R + AR S S+ H A S +RR S S S E R +RR R RS +
Sbjct: 137 RSRSRDRARRSRSREHKRARSRSAERRRRSRTRSRSRSRERYRSRRDRRSRTKSRSRSRS 196
Query: 265 RPRAPTMQ 288
R AP Q
Sbjct: 197 REAAPPPQ 204
>Z70780-4|CAD54137.2| 786|Caenorhabditis elegans Hypothetical
protein F46B6.5b protein.
Length = 786
Score = 30.7 bits (66), Expect = 0.78
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +1
Query: 61 PRRHRSVDRDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRL 240
P++ R V+ + R E R D ++ E++S S S+ E+ RDAE+ R+R
Sbjct: 449 PQQSRPVEEQKRHRDTEKERERDHESDRESISSTSS-----RSNAPEKRERDAEKERKRK 503
Query: 241 SK 246
K
Sbjct: 504 DK 505
>AF077529-5|AAN60534.1| 756|Caenorhabditis elegans Hypothetical
protein C09E8.1b protein.
Length = 756
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -3
Query: 558 YSSEYGRGDTFSYFIFASFIWMCKF--YPRTKHSPKHCVGM 442
Y+++Y G ++ SFI+ +P ++SPK C+GM
Sbjct: 367 YTAQYLYGSLGPMIVYVSFIYQSFIDDFPIVQNSPKQCIGM 407
>AF077529-4|AAC26255.2| 783|Caenorhabditis elegans Hypothetical
protein C09E8.1a protein.
Length = 783
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -3
Query: 558 YSSEYGRGDTFSYFIFASFIWMCKF--YPRTKHSPKHCVGM 442
Y+++Y G ++ SFI+ +P ++SPK C+GM
Sbjct: 367 YTAQYLYGSLGPMIVYVSFIYQSFIDDFPIVQNSPKQCIGM 407
>Z70780-5|CAD91633.1| 779|Caenorhabditis elegans Hypothetical
protein F46B6.5c protein.
Length = 779
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 112 HARMSDSQAHGEAMSDRRSFFYPDS-SSGSEEYNRDAEERRRRLSK 246
H R S++ SDR S S S+ E+ RDAE+ R+R K
Sbjct: 502 HRRYSEAHHSTNVQSDRESISSTSSRSNAPEKRERDAEKERKRKDK 547
>Z70780-3|CAA94828.2| 828|Caenorhabditis elegans Hypothetical
protein F46B6.5a protein.
Length = 828
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 112 HARMSDSQAHGEAMSDRRSFFYPDS-SSGSEEYNRDAEERRRRLSK 246
H R S++ SDR S S S+ E+ RDAE+ R+R K
Sbjct: 502 HRRYSEAHHSTNVQSDRESISSTSSRSNAPEKRERDAEKERKRKDK 547
>Z66567-9|CAA91495.1| 1268|Caenorhabditis elegans Hypothetical
protein ZK455.7 protein.
Length = 1268
Score = 28.3 bits (60), Expect = 4.2
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 445 PNTMLGRMFSSGIEFTHPNERGEYEVAEGISATV 546
P + G++ GIEFT+P R E ++ +G+S V
Sbjct: 369 PEKIQGKLTFDGIEFTYPT-RPELKILKGVSFEV 401
>Z66562-7|CAA91467.1| 1268|Caenorhabditis elegans Hypothetical
protein ZK455.7 protein.
Length = 1268
Score = 28.3 bits (60), Expect = 4.2
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 445 PNTMLGRMFSSGIEFTHPNERGEYEVAEGISATV 546
P + G++ GIEFT+P R E ++ +G+S V
Sbjct: 369 PEKIQGKLTFDGIEFTYPT-RPELKILKGVSFEV 401
>X65055-1|CAA46191.1| 1254|Caenorhabditis elegans P-glycoprotein C
protein.
Length = 1254
Score = 28.3 bits (60), Expect = 4.2
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 445 PNTMLGRMFSSGIEFTHPNERGEYEVAEGISATV 546
P + G++ GIEFT+P R E ++ +G+S V
Sbjct: 369 PEKIQGKLTFDGIEFTYPT-RPELKILKGVSFEV 401
>U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical
protein F23F12.8 protein.
Length = 980
Score = 28.3 bits (60), Expect = 4.2
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +1
Query: 82 DRDVKARGDEHAR-MSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRLSKRSGV 258
+++ KAR E R + +S+ +A DR++ Y + + E NR+ E R KR
Sbjct: 328 EKEEKARELERRRKLEESETARQAELDRQATIYAEQERMAMERNRELERIRLEEKKRENE 387
Query: 259 SNRPRAPTMQ 288
R M+
Sbjct: 388 RVRQEEIAME 397
>Z68227-18|CAA92521.1| 869|Caenorhabditis elegans Hypothetical
protein F49C12.15 protein.
Length = 869
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 190 SGSEEYNRDAEERRRRLSKRSGVSNRPRAPTMQS 291
SGS +R +R + L KR +NR +P QS
Sbjct: 472 SGSSRRSRSRAKRHKALQKRDSKTNRTPSPDRQS 505
>Z68220-11|CAA92493.1| 869|Caenorhabditis elegans Hypothetical
protein F49C12.15 protein.
Length = 869
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 190 SGSEEYNRDAEERRRRLSKRSGVSNRPRAPTMQS 291
SGS +R +R + L KR +NR +P QS
Sbjct: 472 SGSSRRSRSRAKRHKALQKRDSKTNRTPSPDRQS 505
>U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical
protein C37C3.1 protein.
Length = 470
Score = 27.9 bits (59), Expect = 5.5
Identities = 21/71 (29%), Positives = 29/71 (40%)
Frame = +1
Query: 67 RHRSVDRDVKARGDEHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRLSK 246
R RS+ + R H S S+ + S RRS SG +R R+R +
Sbjct: 303 RSRSLSKSPARRRSRHLSRSGSRTPAQRHS-RRSESTSRRRSGRHSRSRSRSPPRKRPVR 361
Query: 247 RSGVSNRPRAP 279
RS +R R P
Sbjct: 362 RSRSRSRSRTP 372
>U55374-7|AAP82641.1| 286|Caenorhabditis elegans Uncoordinated
protein 2, isoform d protein.
Length = 286
Score = 27.9 bits (59), Expect = 5.5
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 109 EHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRLSKRSGVS 261
+H + S + + RS Y D SS +E Y R+ E RR + S VS
Sbjct: 76 QHLQHSHHKTYQNHNQYSRSPIYSDDSSVAESYRREREFRRYQDSTPQDVS 126
>U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated
protein 2, isoform c protein.
Length = 1926
Score = 27.9 bits (59), Expect = 5.5
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 109 EHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRLSKRSGVS 261
+H + S + + RS Y D SS +E Y R+ E RR + S VS
Sbjct: 1716 QHLQHSHHKTYQNHNQYSRSPIYSDDSSVAESYRREREFRRYQDSTPQDVS 1766
>U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
protein 2, isoform b protein.
Length = 2027
Score = 27.9 bits (59), Expect = 5.5
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 109 EHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRLSKRSGVS 261
+H + S + + RS Y D SS +E Y R+ E RR + S VS
Sbjct: 1817 QHLQHSHHKTYQNHNQYSRSPIYSDDSSVAESYRREREFRRYQDSTPQDVS 1867
>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
activated calciumchannel alpha-1 subunit protein.
Length = 2027
Score = 27.9 bits (59), Expect = 5.5
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 109 EHARMSDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRLSKRSGVS 261
+H + S + + RS Y D SS +E Y R+ E RR + S VS
Sbjct: 1817 QHLQHSHHKTYQNHNQYSRSPIYSDDSSVAESYRREREFRRYQDSTPQDVS 1867
>Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical
protein H19N07.2c protein.
Length = 1135
Score = 27.1 bits (57), Expect = 9.6
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -1
Query: 59 GDLYEPFFEDFVLDNC 12
G +EPFF+D++L+ C
Sbjct: 864 GSRFEPFFDDYMLNTC 879
>Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical
protein H19N07.2b protein.
Length = 1130
Score = 27.1 bits (57), Expect = 9.6
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -1
Query: 59 GDLYEPFFEDFVLDNC 12
G +EPFF+D++L+ C
Sbjct: 864 GSRFEPFFDDYMLNTC 879
>Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical
protein H19N07.2a protein.
Length = 1133
Score = 27.1 bits (57), Expect = 9.6
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -1
Query: 59 GDLYEPFFEDFVLDNC 12
G +EPFF+D++L+ C
Sbjct: 864 GSRFEPFFDDYMLNTC 879
>Z46381-9|CAI58660.1| 807|Caenorhabditis elegans Hypothetical
protein M01F1.4b protein.
Length = 807
Score = 27.1 bits (57), Expect = 9.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 425 GSTTNLVLSTTNVIRSSPSWCFGA 354
G T +LV T+NV+ S P W A
Sbjct: 422 GETVHLVRLTSNVVNSRPDWLAAA 445
>Z46381-8|CAA86517.2| 808|Caenorhabditis elegans Hypothetical
protein M01F1.4a protein.
Length = 808
Score = 27.1 bits (57), Expect = 9.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 425 GSTTNLVLSTTNVIRSSPSWCFGA 354
G T +LV T+NV+ S P W A
Sbjct: 423 GETVHLVRLTSNVVNSRPDWLAAA 446
>U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily
assigned gene nameprotein 162 protein.
Length = 2643
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 265 CSILQIALRDVSDAPPRLCCTLPSHCCYQD 176
C L RD+SD P L C P HC Y +
Sbjct: 106 CGRLPNGDRDLSDEAPEL-CNQPLHCDYNE 134
>AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical
protein D1037.1 protein.
Length = 786
Score = 27.1 bits (57), Expect = 9.6
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +1
Query: 64 RRHRSVDRDVKARGDEHARM-SDSQAHGEAMSDRRSFFYPDSSSGSEEYNRDAEERRRRL 240
++ + V R K +R S S++ G + RRS S S S +R+ + ++ L
Sbjct: 58 KKSKKVRRRSKTWSSSRSRSRSRSRSRGRSQERRRSRKSRKSRSRSRLKHREEKIEKKNL 117
Query: 241 SKRSGVSNRPRAPTMQSG 294
K P+AP+ ++G
Sbjct: 118 EKAPKNELIPQAPSTENG 135
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.130 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,273,663
Number of Sequences: 27780
Number of extensions: 269961
Number of successful extensions: 1005
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 998
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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