Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11g17
         (635 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    24   1.2  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   2.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.8  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   8.6  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   8.6  

>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +3

Query: 375 CCCCRMGFTK*NNFTSHHAFD 437
           C CCR  F +    T  H +D
Sbjct: 81  CYCCRESFLRERTITLTHCYD 101


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +3

Query: 327 NTKWECINRW 356
           NT W C+ RW
Sbjct: 158 NTTWRCLYRW 167


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 7/24 (29%), Positives = 16/24 (66%)
 Frame = -2

Query: 256 IFYV*HMDDIYCIGYIVFSVKLKY 185
           I+Y  +M  ++C  +I+F++ L +
Sbjct: 258 IYYFYYMHLLFCCAFIIFTMHLLF 281


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 484 HDIVNYLLEHYPTDT 528
           H IV+ LL H P D+
Sbjct: 179 HQIVDRLLSHAPIDS 193


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 484 HDIVNYLLEHYPTDT 528
           H IV+ LL H P D+
Sbjct: 170 HQIVDRLLSHAPIDS 184


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,045
Number of Sequences: 336
Number of extensions: 3425
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)