Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11g13
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   2.9  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   2.9  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   2.9  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   3.8  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   6.7  
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    21   8.9  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 159 SDIIHTKCHYLMRNLMYP 212
           +D  HT+ HY M   MYP
Sbjct: 296 TDRKHTQQHYQMNQNMYP 313


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 159 SDIIHTKCHYLMRNLMYP 212
           +D  HT+ HY M   MYP
Sbjct: 244 TDRKHTQQHYQMNQNMYP 261


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 159 SDIIHTKCHYLMRNLMYP 212
           +D  HT+ HY M   MYP
Sbjct: 427 TDRKHTQQHYQMNQNMYP 444


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = +1

Query: 418 YYIDEEEQKMKGTLRDWRKALRTPITYR 501
           Y++ E    MK   R W  A+  P   R
Sbjct: 461 YFVAESFDDMKDKFRRWVSAMSRPFEVR 488


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 130 KIFETQYVLYLILFIQNV 183
           K F   YV YL++F+Q +
Sbjct: 171 KRFLPVYVSYLLIFVQQI 188


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 409 IMYYYIDEEEQKMKGTLRDWRKALR 483
           +M Y+I   +QK K  +R  +KAL+
Sbjct: 64  VMDYFIKMVKQKHKKDIRADKKALQ 88


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,532
Number of Sequences: 336
Number of extensions: 3340
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)