Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11g13
         (654 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_49993| Best HMM Match : 7tm_1 (HMM E-Value=3.7e-13)                 28   5.8  
SB_44792| Best HMM Match : 7tm_1 (HMM E-Value=3.7e-13)                 28   5.8  
SB_43607| Best HMM Match : INSIG (HMM E-Value=9.3e-09)                 28   7.6  

>SB_49993| Best HMM Match : 7tm_1 (HMM E-Value=3.7e-13)
          Length = 331

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 15/59 (25%), Positives = 29/59 (49%)
 Frame = +1

Query: 409 IMYYYIDEEEQKMKGTLRDWRKALRTPITYRVGNAVRIQPQLVVLMTSMGTFLLLLVYY 585
           ++Y+ I      +   LRD    +  P   R    +R++  + +++ S+GTF+LL   Y
Sbjct: 197 VLYFAIAALGFMILWRLRDMETFVNLPEVQRRARKLRVRNAVRMVLCSLGTFILLTTPY 255


>SB_44792| Best HMM Match : 7tm_1 (HMM E-Value=3.7e-13)
          Length = 331

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 15/59 (25%), Positives = 29/59 (49%)
 Frame = +1

Query: 409 IMYYYIDEEEQKMKGTLRDWRKALRTPITYRVGNAVRIQPQLVVLMTSMGTFLLLLVYY 585
           ++Y+ I      +   LRD    +  P   R    +R++  + +++ S+GTF+LL   Y
Sbjct: 197 VLYFAIAALGFMILWRLRDMETFVNLPEVQRRARKLRVRNAVRMVLCSLGTFILLTTPY 255


>SB_43607| Best HMM Match : INSIG (HMM E-Value=9.3e-09)
          Length = 544

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +2

Query: 104 SFNCRRIYLKFLKHNMCYI*YYSYKMSLFNEKFNVPSNFNIKY 232
           SFN  R Y++     +    YY Y+MS  +EK  VP N   +Y
Sbjct: 502 SFNIVRHYVEKSSSKLKKALYYIYQMSPPSEKREVPPNSAYRY 544


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,926,230
Number of Sequences: 59808
Number of extensions: 361946
Number of successful extensions: 702
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 700
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)