Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11g12
(628 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0646 + 10141967-10142476,10143721-10144254 36 0.020
02_01_0763 - 5665010-5665202,5665285-5665375,5665460-5666245,566... 35 0.061
01_07_0386 + 43218686-43218745,43218972-43219190,43219307-432193... 35 0.061
05_06_0233 + 26599068-26599466,26601214-26601829,26601871-266019... 33 0.14
03_02_0148 - 5928703-5928931,5929099-5929171,5929288-5929408,592... 33 0.19
01_07_0289 + 42540059-42541141 33 0.25
03_05_0937 - 28967038-28967245,28967348-28967556,28967584-289676... 32 0.43
11_08_0097 + 28330565-28330645,28330768-28330986,28331066-283311... 31 0.57
02_02_0469 + 10691648-10691692,10691755-10691907,10692043-106920... 31 0.57
12_01_0019 - 135627-135983,136564-136797,137118-137196,137268-13... 31 0.99
11_01_0021 - 143576-143932,144434-144667,144988-145066,145138-14... 31 0.99
08_02_1279 - 25841767-25842017,25842181-25842418,25842685-258430... 31 0.99
11_06_0633 + 25681756-25682061,25682961-25683329,25683419-25683733 30 1.7
09_04_0683 - 19431034-19431495,19431632-19431997,19432055-194323... 30 1.7
09_04_0608 + 18924648-18924899,18926341-18926435,18926903-189272... 30 1.7
09_04_0551 - 18488584-18490017 30 1.7
02_02_0123 + 7015905-7015928,7015975-7016105,7017675-7017940,701... 30 1.7
01_07_0083 + 40970890-40971015,40971886-40971994,40972679-409727... 30 1.7
01_05_0099 - 18098169-18098390,18098878-18098972,18099063-180991... 29 2.3
12_02_1218 - 27088206-27088214,27088577-27088643,27088755-270888... 28 5.3
08_01_0783 + 7585326-7585477,7586420-7586589,7586687-7586801,758... 28 5.3
03_06_0002 + 30917082-30917146,30917594-30917975,30918083-309182... 28 7.0
04_04_0058 - 22416949-22418196 27 9.2
03_02_0897 - 12239375-12239458,12240035-12240116,12240213-122407... 27 9.2
>03_02_0646 + 10141967-10142476,10143721-10144254
Length = 347
Score = 36.3 bits (80), Expect = 0.020
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +3
Query: 459 TVAVVIAHPFHVVSVRMMASFIGKEEHYSSLLGAIVSIYKDDGILGFLHGLIPKXL 626
T + PF VV R+MA + Y ++ AI +IY ++G+ GL+P+ +
Sbjct: 262 TAGPICTGPFDVVKTRLMAQGRTGDIKYKGMVHAIRTIYTEEGLRALWKGLLPRLM 317
>02_01_0763 -
5665010-5665202,5665285-5665375,5665460-5666245,
5667745-5668225
Length = 516
Score = 34.7 bits (76), Expect = 0.061
Identities = 30/136 (22%), Positives = 56/136 (41%)
Frame = +3
Query: 219 LPNVFQYIKYIKASDGFFGCYRGLSARMLGLIAASQLTSKVIVAVGIDLPEINDPPNIVT 398
+P++ + I +G YRGL +LG++ + + V L E++ ++
Sbjct: 366 IPSLGALSRDIWMQEGPRAFYRGLVPSLLGMVPYAGIDLTVYET----LKEMSKT-YVLK 420
Query: 399 DDEPKVEDYIKLGRRDMIMQTVAVVIAHPFHVVSVRMMASFIGKEEHYSSLLGAIVSIYK 578
D +P ++LG + + +P V+ R+ A E Y + +
Sbjct: 421 DSDPG--PLVQLGC-GTVSGALGATCVYPLQVIRTRLQAQRANSEAAYRGMSDVFWKTLQ 477
Query: 579 DDGILGFLHGLIPKXL 626
+GI GF GL+P L
Sbjct: 478 HEGISGFYKGLVPNLL 493
>01_07_0386 +
43218686-43218745,43218972-43219190,43219307-43219391,
43219583-43219713,43219802-43219900,43219984-43220088,
43220190-43220264,43222006-43222092,43222129-43222173
Length = 301
Score = 34.7 bits (76), Expect = 0.061
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +3
Query: 462 VAVVIAHPFHVVSVRMMASFIGK----EEHYSSLLGAIVSIYKDDGILGFLHGLIP 617
+A+V+A+P +V VR+ A GK + HYS L A +I + +GI GL P
Sbjct: 124 IAIVVANPTDLVKVRLQAD--GKATTVKRHYSGALNAYATIIRQEGIGALWTGLGP 177
>05_06_0233 +
26599068-26599466,26601214-26601829,26601871-26601917,
26602101-26602268
Length = 409
Score = 33.5 bits (73), Expect = 0.14
Identities = 32/129 (24%), Positives = 56/129 (43%)
Frame = +3
Query: 228 VFQYIKYIKASDGFFGCYRGLSARMLGLIAASQLTSKVIVAVGIDLPEINDPPNIVTDDE 407
+ +++ I +G G YRGL A + G++ + + G D + +V D
Sbjct: 198 ICHFVQTIYNKNGIRGIYRGLPASLQGMVV-----HRGLYFGGFDTAK----DVMVPLDS 248
Query: 408 PKVEDYIKLGRRDMIMQTVAVVIAHPFHVVSVRMMASFIGKEEHYSSLLGAIVSIYKDDG 587
P + ++ + ++A +I++P V RMM + YSS L IYK +G
Sbjct: 249 PLWQRWVTA----QAVTSMAGLISYPLDTVRRRMMMQSGMDVQMYSSTLDCWRKIYKVEG 304
Query: 588 ILGFLHGLI 614
I F G +
Sbjct: 305 IKSFYRGAL 313
>03_02_0148 -
5928703-5928931,5929099-5929171,5929288-5929408,
5929907-5929952,5930361-5930571,5930837-5930986,
5931122-5931179,5931285-5931400,5931986-5932091
Length = 369
Score = 33.1 bits (72), Expect = 0.19
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = +3
Query: 225 NVFQYIKYIKASDGFFGCYRGLSARMLGLIAASQLTSKVIVAVGIDLPEINDPPNI 392
N+FQ I+ + SDG G YRG+S + G +A VI + L N PN+
Sbjct: 78 NIFQMIRTVWVSDGLKGFYRGISPGVTGSLATGATYFGVIESTKTWLEHSN--PNL 131
>01_07_0289 + 42540059-42541141
Length = 360
Score = 32.7 bits (71), Expect = 0.25
Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 1/133 (0%)
Frame = +3
Query: 231 FQYIKYIKASDGFFGCYRGLSARMLGLIAASQLT-SKVIVAVGIDLPEINDPPNIVTDDE 407
+Q + I +DGFFG Y G +A +L + A L+ S L + N +T E
Sbjct: 197 WQVLLQILQTDGFFGLYAGYAATLLRNLPAGVLSYSSFEYLKAFTLKQRN--KESLTPGE 254
Query: 408 PKVEDYIKLGRRDMIMQTVAVVIAHPFHVVSVRMMASFIGKEEHYSSLLGAIVSIYKDDG 587
+ G + ++ + P VV R+M +G E +++G + + ++G
Sbjct: 255 S-----VLCG---ALAGAISAALTTPLDVVKTRLMTR-VGTEGS-RTVVGTMREVVAEEG 304
Query: 588 ILGFLHGLIPKXL 626
++G G+ P+ L
Sbjct: 305 LMGLSRGIGPRVL 317
>03_05_0937 -
28967038-28967245,28967348-28967556,28967584-28967644,
28967926-28968742,28968960-28971024
Length = 1119
Score = 31.9 bits (69), Expect = 0.43
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +3
Query: 270 FGCYRGLSARMLGLIAASQLTSKVIVAVGIDLPEINDPPNI 392
FGC L + +IA S+ +++ V +P ++DPP +
Sbjct: 84 FGCLLALDEKTFNVIALSENAPEMLTTVSHAVPSVDDPPKL 124
>11_08_0097 +
28330565-28330645,28330768-28330986,28331066-28331144,
28331222-28331355,28331447-28331545,28331638-28331742,
28332377-28332451,28333671-28333757,28333854-28333889
Length = 304
Score = 31.5 bits (68), Expect = 0.57
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +3
Query: 465 AVVIAHPFHVVSVRMMASFIGKEEHYSSLLGAIVSIYKDDGILGFLHGLIP 617
AV + P VV RMM + Y+S + V K+DG L F G +P
Sbjct: 230 AVCVGSPVDVVKSRMMG-----DSAYTSTIDCFVKTLKNDGPLAFYKGFLP 275
>02_02_0469 +
10691648-10691692,10691755-10691907,10692043-10692093,
10692162-10692224,10692327-10693031,10693128-10693223,
10693307-10695547
Length = 1117
Score = 31.5 bits (68), Expect = 0.57
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 227 RFPVYKVHKGFGWFLRLLQGLISKNAWSYRRKSTHIEGNSS 349
+FP + + F + LL G + K +Y+RK H+E N S
Sbjct: 464 KFPSLQAAQRFYYAHALLTGFVGKRGTNYKRKKFHLECNKS 504
>12_01_0019 -
135627-135983,136564-136797,137118-137196,137268-137383,
137847-137991,138177-138594,138644-138649,139315-139945
Length = 661
Score = 30.7 bits (66), Expect = 0.99
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +3
Query: 462 VAVVIAHPFHVVSVRMMASFIGKEEHYSSLLGAIVSIYKDDGILGFLHGLIPK 620
+A V+ PF V+ RMM + G S+ + SI +++G LG G IP+
Sbjct: 568 LAAVVTTPFDVMKTRMMTAPPGTP---VSMQLIVFSILRNEGPLGLFKGAIPR 617
>11_01_0021 -
143576-143932,144434-144667,144988-145066,145138-145253,
145717-145861,146048-146465,147206-147869
Length = 670
Score = 30.7 bits (66), Expect = 0.99
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +3
Query: 462 VAVVIAHPFHVVSVRMMASFIGKEEHYSSLLGAIVSIYKDDGILGFLHGLIPK 620
+A V+ PF V+ RMM + G S+ + SI +++G LG G IP+
Sbjct: 577 LAAVVTTPFDVMKTRMMTAPPGTP---VSMQLIVFSILRNEGPLGLFKGAIPR 626
>08_02_1279 -
25841767-25842017,25842181-25842418,25842685-25843018,
25843498-25843592,25845461-25845700
Length = 385
Score = 30.7 bits (66), Expect = 0.99
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +3
Query: 462 VAVVIAHPFHVVSVRMMASFIGKEEHYSSLLGAIVSIYKDDGILGFLHGLIP 617
V+ ++ HP V+ R+ + E Y S+ A IY+ DGI G GL P
Sbjct: 211 VSTLVCHPLEVLKDRLTVN----REAYPSIGLAFNKIYQTDGIGGLYAGLCP 258
>11_06_0633 + 25681756-25682061,25682961-25683329,25683419-25683733
Length = 329
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 180 RRSTTLFGRPAMILPNVFQYIKYIKASDGFFGCYRGLSARMLGLIAAS 323
RR G+P + N F K I +++GFF +RG+ A +L +A +
Sbjct: 254 RRMMLTSGQP-LKYKNAFHAAKQIVSTEGFFTLFRGVGANILSGMAGA 300
>09_04_0683 -
19431034-19431495,19431632-19431997,19432055-19432326,
19433621-19433686,19433924-19433978,19434509-19434577,
19435200-19435307,19435394-19435462,19435883-19436038,
19436089-19436229,19436514-19436568,19437103-19437233,
19437382-19437486
Length = 684
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/69 (24%), Positives = 35/69 (50%)
Frame = +3
Query: 411 KVEDYIKLGRRDMIMQTVAVVIAHPFHVVSVRMMASFIGKEEHYSSLLGAIVSIYKDDGI 590
+ E I +++++++ VA + ++ R+ K Y ++ A+ +Y++ GI
Sbjct: 148 QAEKKIMESKKELLLKDVARANSIEVSILKDRLYKLDSEKPRPYGTIQ-AVREVYRESGI 206
Query: 591 LGFLHGLIP 617
GF GLIP
Sbjct: 207 RGFWKGLIP 215
>09_04_0608 +
18924648-18924899,18926341-18926435,18926903-18927236,
18927345-18927582,18927813-18928069
Length = 391
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +3
Query: 471 VIAHPFHVVSVRMMASFIGKEEHYSSLLGAIVSIYKDDGILGFLHGLIP 617
++ HP V+ R+ + E Y S+ IY+ DGI G GL P
Sbjct: 218 LVCHPLEVIKDRLTIN----REVYPSISVTFSKIYRTDGIRGLYAGLCP 262
>09_04_0551 - 18488584-18490017
Length = 477
Score = 29.9 bits (64), Expect = 1.7
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +3
Query: 207 PAMILPNVFQYIKYIKASDGFFGCYRGLSARMLGLIAASQLTSKVIVAVGID-LPEINDP 383
P M+L +VF Y A + A +A + ++SK V LP I DP
Sbjct: 18 PMMVLADVFLDHGYAVAVALINPSVKDDDAAFTAAVARA-VSSKSSATVSFHMLPRIPDP 76
Query: 384 PNIVTDDEPKVEDYIKLGRR 443
P++ DD+ +Y L RR
Sbjct: 77 PSLAFDDDKFFTNYFDLVRR 96
>02_02_0123 +
7015905-7015928,7015975-7016105,7017675-7017940,
7018239-7018327,7018716-7018811,7018874-7018969,
7019121-7019251,7020123-7020177,7020645-7020800,
7021238-7021306,7021392-7021499,7022128-7022196,
7022743-7022797,7023031-7023227
Length = 513
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/69 (24%), Positives = 35/69 (50%)
Frame = +3
Query: 411 KVEDYIKLGRRDMIMQTVAVVIAHPFHVVSVRMMASFIGKEEHYSSLLGAIVSIYKDDGI 590
+ E I +++++++ VA + ++ R+ K Y ++ A+ +Y++ GI
Sbjct: 300 QAEKKIMESKKELLLKDVARANSIEVSILKDRLYKLDSEKPRPYGTIQ-AVREVYRESGI 358
Query: 591 LGFLHGLIP 617
GF GLIP
Sbjct: 359 RGFWKGLIP 367
>01_07_0083 +
40970890-40971015,40971886-40971994,40972679-40972790,
40972944-40973100,40973609-40973761,40974143-40974292,
40974803-40974999,40975446-40975473
Length = 343
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +3
Query: 120 CHPMEYAKVLIQLGYEPLAPRRSTTLFGRPAMILPNVFQYIKYIKASDGFFGCYRGLSAR 299
CHP++ K Q+ PR + + ++ +K I A +GF G Y+GL
Sbjct: 258 CHPLDVVKKRFQIEGLKRHPRYGARI---ESSTYKGMYHALKEIVAKEGFGGLYKGLFPS 314
Query: 300 MLGLIAASQLT 332
++ A +T
Sbjct: 315 LVKSAPAGAVT 325
>01_05_0099 -
18098169-18098390,18098878-18098972,18099063-18099131,
18099277-18099352,18101412-18101524,18104137-18104185,
18104540-18104572,18105446-18105552,18106892-18106990,
18107122-18107203
Length = 314
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 456 QTVAVVIAHPFHVVSVRMMASFIGKEE--HYSSLLGAIVSIYKDDGILGFLHG 608
+ A +I +P VV ++ + HY+ ++ I +Y+ +GI GF G
Sbjct: 230 KVAASIITYPHEVVRSKLQEQGRARHGAVHYTGVIDCIKQVYQKEGIPGFYRG 282
>12_02_1218 -
27088206-27088214,27088577-27088643,27088755-27088821,
27088934-27089054,27089272-27089351,27089574-27089686,
27090305-27090420,27090507-27090575,27090684-27090758,
27090836-27090880,27091100-27091187,27091488-27091570,
27091655-27091705,27091848-27091905,27092019-27092201,
27092385-27092546,27092713-27093029
Length = 567
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +3
Query: 405 EPKVEDYIKLGRRDMIMQTVAVVIAHPFHVVSVRMMASFIGKEEHYSSLLGAIV 566
E K+E + KL D ++ + + H +H+ V M + K +S LLG ++
Sbjct: 162 EEKLEKFCKL--MDFVIDSPPPEMRHEYHLSMVDRMKDKVDKSVFWSKLLGIVM 213
>08_01_0783 +
7585326-7585477,7586420-7586589,7586687-7586801,
7586887-7587055,7587185-7587319,7587409-7587728,
7587992-7588127,7588224-7588472,7588567-7588787,
7588906-7589164,7589264-7589971,7590095-7590424
Length = 987
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 495 VSVRMMASFIGKEEHYSSLLGAIVSIYKDDGILGF 599
+S+ F+G+ E ++LG ++S KDD +L F
Sbjct: 220 LSICQCLMFLGEPETVGNILGKLLSGSKDDALLAF 254
>03_06_0002 +
30917082-30917146,30917594-30917975,30918083-30918279,
30918372-30918513,30919287-30919415,30919460-30919471
Length = 308
Score = 27.9 bits (59), Expect = 7.0
Identities = 30/117 (25%), Positives = 43/117 (36%), Gaps = 1/117 (0%)
Frame = +3
Query: 261 DGFFGCYRGLSARMLGLIAASQLTSKVIVAVGIDLPEINDPPNIVTDDEPKVEDYIK-LG 437
DG G YRG + G I A + + ++ +P + EP + LG
Sbjct: 76 DGVPGLYRGFGTVITGAIPARIIFLTALETTKAASLKLVEPFKL---SEPVQAAFANGLG 132
Query: 438 RRDMIMQTVAVVIAHPFHVVSVRMMASFIGKEEHYSSLLGAIVSIYKDDGILGFLHG 608
+ + AV + P VVS ++M Y L I K DGI G G
Sbjct: 133 GLSASLCSQAVFV--PIDVVSQKLMVQGYSGHVRYKGGLDVAQQIIKADGIRGLYRG 187
>04_04_0058 - 22416949-22418196
Length = 415
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -2
Query: 207 GGQTGSWTGAEPKARTQAGLKLLRIPWDGIL 115
GG TGS A+P A T A + P D IL
Sbjct: 259 GGDTGSMPQADPVANTIAAAQQAAAPGDAIL 289
>03_02_0897 -
12239375-12239458,12240035-12240116,12240213-12240714,
12241150-12241303,12241458-12241629,12242237-12242443,
12242926-12243323
Length = 532
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 471 VIAHPFHVVSVRMMASFIGKEEHYSSLLGA 560
V AHP+HV+ + M S G + + + GA
Sbjct: 396 VCAHPYHVLRINKMLSCAGADRLQTGMRGA 425
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,436,945
Number of Sequences: 37544
Number of extensions: 379853
Number of successful extensions: 940
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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