Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11g12
(628 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_3857| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 37 0.012
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 37 0.012
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.027
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 34 0.082
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.33
SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.44
SB_47113| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 31 1.0
SB_44108| Best HMM Match : Chorion_3 (HMM E-Value=0.81) 30 1.8
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 29 3.1
SB_59337| Best HMM Match : Chorion_3 (HMM E-Value=2.5) 29 4.1
SB_44331| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_26662| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_57038| Best HMM Match : 7tm_1 (HMM E-Value=1.7e-05) 28 7.1
SB_22043| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 27 9.4
SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061) 27 9.4
SB_2635| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_3857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +3
Query: 492 VVSVRMMASFIGKEEHYSSLLGAIVSIYKDDGILGFLHGLIPK 620
+++VRM+ F+GKE Y+ L +I IY + GILGF GL+P+
Sbjct: 133 LITVRMVVQFVGKEAIYTGLTSSIKEIYNEHGILGFFAGLVPR 175
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 37.1 bits (82), Expect = 0.012
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 462 VAVVIAHPFHVVSVRMMASFIGKEE-HYSSLLGAIVSIYKDDGILGFLHGLIPKXL 626
+A+V +P V+ R+ + K HY + A+ +I +++GIL G+ P L
Sbjct: 165 IAMVTVYPCEVIKTRLTVQHVNKSNAHYKGMRHALKTILREEGILALYKGVTPSFL 220
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 37.1 bits (82), Expect = 0.012
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 462 VAVVIAHPFHVVSVRMMASFIGKEE-HYSSLLGAIVSIYKDDGILGFLHGLIPKXL 626
+A+V +P V+ R+ + K HY + A+ +I +++GIL G+ P L
Sbjct: 434 IAMVTVYPCEVIKTRLTVQHVNKSNAHYKGMRHALKTILREEGILALYKGVTPSFL 489
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 35.9 bits (79), Expect = 0.027
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +3
Query: 462 VAVVIAHPFHVVSVRM-MASFIGKEEHYSSLLGAIVSIYKDDGI-LGFLHGL 611
V+ IA+P VV RM +A + Y++ + +V++YKDDGI G GL
Sbjct: 185 VSQTIAYPLDVVRRRMQLAGAVPDGHKYNTCINTLVNVYKDDGIRRGLYRGL 236
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 34.3 bits (75), Expect = 0.082
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = +3
Query: 465 AVVIAHPFHVVSVRMMASFIGKEEHYSSLLGAIVSIYKDDGILGFLHGLIP 617
A ++ +P +V R+ I +++ Y+ L+ A IY+D+G+ F G +P
Sbjct: 3 AALLTYPLDMVRARLA---ITQKKKYTGLINAFTRIYRDEGMRTFYRGYVP 50
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 462 VAVVIAHPFHVVSVRMMASFIGKEE--HYSSLLGAIVSIYKDDGILGFLHGLIP 617
VA HP VV R+ + +Y+ ++ A+ I+ ++GI G GL+P
Sbjct: 41 VATASTHPLDVVRARLTVQDMSTRSISNYTGIVSALRRIHIEEGIRGLYKGLVP 94
>SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 200
Score = 31.9 bits (69), Expect = 0.44
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 474 IAHPFHVVSVRM-MASFIGKEEHYSSLLGAIVSIYKDDGI-LGFLHGL 611
+A+P VV RM +A + YS+ + +S+Y +DGI G GL
Sbjct: 123 LAYPLDVVRRRMQLAGTVADGHKYSTCINTFISVYTEDGIRRGLYRGL 170
>SB_47113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1286
Score = 31.5 bits (68), Expect = 0.58
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Frame = +3
Query: 228 VFQYIKYIKASDGFFGCYRGLSARML--GLI--AASQLTSKVIVAVGIDLPE-INDPPNI 392
+ Q IKY+ G G + G +L G + AS+ KV V G+DL + IN+PP
Sbjct: 530 ILQLIKYVLKLQGK-GVHCGDEVNLLFDGELNPVASKAQKKVPVPEGLDLDKWINEPPKE 588
Query: 393 VTDDEPKVED 422
+++E ED
Sbjct: 589 TSEEEDNAED 598
>SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 30.7 bits (66), Expect = 1.0
Identities = 26/124 (20%), Positives = 45/124 (36%)
Frame = +3
Query: 240 IKYIKASDGFFGCYRGLSARMLGLIAASQLTSKVIVAVGIDLPEINDPPNIVTDDEPKVE 419
+K G G YRGLS+ + G + + + V + N + D+ K+
Sbjct: 86 VKKTVKGHGVLGLYRGLSSLLYGSVPKASVRFAVFEYL----------KNKMADENGKLT 135
Query: 420 DYIKLGRRDMIMQTVAVVIAHPFHVVSVRMMASFIGKEEHYSSLLGAIVSIYKDDGILGF 599
+ L + AVV+ P + V+ + Y + +I K +G G
Sbjct: 136 QFQTLASGLGAGVSEAVVVVCPMETIKVKFIHDQTQPNPKYKGFFSGVRTILKTEGFFGV 195
Query: 600 LHGL 611
GL
Sbjct: 196 YKGL 199
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 231 FQYIKYIKASDGFFGCYRGLSARML 305
F ++ I ++GFFG Y+GL+A ++
Sbjct: 180 FSGVRTILKTEGFFGVYKGLTATVI 204
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +3
Query: 480 HPFHVVSVRMMASFIGKEEHYSSLLGAIVSIYKDDGILGFLHGLIPKXL 626
+P V+ R+ I K Y LL A IY+ +GI F GL P L
Sbjct: 249 YPLEVLKTRLA---IRKTGQYRGLLHAASVIYQKEGIRSFYRGLFPSLL 294
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 531 EEHYSSLLGAIVSIYKDDGILGFLHGLIP 617
+ HY +LG +V+++K +G+ GLIP
Sbjct: 63 DAHYRGMLGTMVTLFKTEGMKTMYKGLIP 91
>SB_44108| Best HMM Match : Chorion_3 (HMM E-Value=0.81)
Length = 402
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 98 TNTCYNNMPSHGIRKSFNPAWVRAFGSAPVHDPVWPPSHDIT 223
T+ + +P K+F PA V A G+AP P P+H +T
Sbjct: 325 TDPGIDRVPFRRRSKAFAPAKVHAEGAAPAPSPRMHPAHSMT 366
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +3
Query: 483 PFHVVSVRMMASFIGKEEHYSSLLGAIVSIYKDDGILGFLHGLIPKXL 626
PF V+ R+ A + Y ++ + YK++G++ F G+ P L
Sbjct: 152 PFDVIKSRIQADGNLGKFRYKGMMDCALQSYKEEGMIVFTRGIWPTLL 199
>SB_59337| Best HMM Match : Chorion_3 (HMM E-Value=2.5)
Length = 480
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 98 TNTCYNNMPSHGIRKSFNPAWVRAFGSAPVHDPVWPPSHDIT 223
T+ + +PS K+F PA V A G+AP P +H +T
Sbjct: 403 TDPGIDRVPSRRRSKAFAPAKVHAEGAAPAPSPRTHAAHSMT 444
>SB_44331| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1916
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 98 TNTCYNNMPSHGIRKSFNPAWVRAFGSAPVHDPVWPPSHDIT 223
T+ + +PS K+F PA V A G+AP P +H +T
Sbjct: 621 TDPGIDRVPSRRPSKAFAPAKVHAEGAAPAPSPRTHAAHSMT 662
>SB_26662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +2
Query: 128 HGIRKSFNPAWVRAFGSAPVHDPVWPPSHDIT 223
HGI +P+W G + P W H IT
Sbjct: 66 HGITVMVSPSWYHRHGITAMESPSWYHRHGIT 97
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +2
Query: 128 HGIRKSFNPAWVRAFGSAPVHDPVWPPSHDIT 223
HGI +P+W G + P W H IT
Sbjct: 108 HGITVMVSPSWYHRHGITAMESPSWYHRHGIT 139
>SB_57038| Best HMM Match : 7tm_1 (HMM E-Value=1.7e-05)
Length = 375
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 177 EPKARTQAGLKLLRIPWDGILL*QVFV 97
EPK R +G+ +L + W G+L VFV
Sbjct: 37 EPKVRVPSGIFVLNMAWTGVLGAVVFV 63
>SB_22043| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 143
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/42 (28%), Positives = 18/42 (42%)
Frame = +2
Query: 128 HGIRKSFNPAWVRAFGSAPVHDPVWPPSHDIT*RFPVYKVHK 253
HGI +P+W G + P W H IT + + H+
Sbjct: 66 HGITVMVSPSWYHRHGITVMVSPSWYHLHGITVMVSLSRYHR 107
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 27.5 bits (58), Expect = 9.4
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3
Query: 540 YSSLLGAIVSIYKDDGILGFLHG 608
YS + G + IY+D+G+ G+ G
Sbjct: 591 YSGVGGTLAKIYRDEGLYGYFKG 613
>SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3367
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +3
Query: 72 KERIAALPSQILVTTICHPMEYAKVLIQLGYEPLAPRRSTTLFGRPAMILPNVFQYIKYI 251
KE++ A + I + ++LIQ YE + P+ +L +VF IKY+
Sbjct: 2057 KEKLIAKGEKADEAAISEGLNEQEILIQSVYETMVPKLVAEDIPLLQSLLSDVFPGIKYV 2116
Query: 252 KA 257
A
Sbjct: 2117 SA 2118
>SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061)
Length = 114
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +3
Query: 504 RMMASFIGKEEHYS--SLLGAIVSIYKDDGILGF 599
R+ F + +HY S+ GA+ +IYK +G+ G+
Sbjct: 78 RLKILFQAQNKHYKNMSVFGALKAIYKKEGLQGY 111
>SB_2635| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1390
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 141 KVLIQLGYEPLAPRRSTTLFGRPAMILPNVFQYIKY 248
K+LIQL Y L+P+ L P +LP+ + Y
Sbjct: 880 KLLIQLSYTWLSPKLKKDLVAGPRTLLPHAASFHGY 915
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,082,431
Number of Sequences: 59808
Number of extensions: 432444
Number of successful extensions: 1166
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1165
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1560464625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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