Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11g12
(628 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000264-8|AAK70649.2| 165|Caenorhabditis elegans Hypothetical ... 50 1e-06
AF000264-10|AAC71129.2| 272|Caenorhabditis elegans Hypothetical... 50 1e-06
Z79755-2|CAB02107.1| 294|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z49207-2|CAA89069.1| 298|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z22180-4|CAA80178.1| 312|Caenorhabditis elegans Hypothetical pr... 29 2.1
U00052-8|AAK21421.2| 707|Caenorhabditis elegans Hypothetical pr... 29 2.1
AC091267-3|AAK31563.3| 339|Caenorhabditis elegans Hypothetical ... 29 2.1
Z75532-5|CAD56651.1| 360|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z75532-4|CAA99811.1| 310|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z48240-1|CAA88283.1| 312|Caenorhabditis elegans DIF-1 protein. 29 3.6
X76115-1|CAA53721.1| 312|Caenorhabditis elegans carrier protein... 29 3.6
U61949-5|AAB03153.2| 312|Caenorhabditis elegans Differentiation... 29 3.6
Z74028-1|CAA98424.1| 334|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z69662-5|CAA93500.3| 449|Caenorhabditis elegans Hypothetical pr... 28 6.3
U64842-4|AAB37086.2| 306|Caenorhabditis elegans Hypothetical pr... 28 6.3
X76114-1|CAA53720.1| 290|Caenorhabditis elegans Oxoglutarate/ma... 27 8.3
U23525-8|AAC46570.1| 290|Caenorhabditis elegans Hypothetical pr... 27 8.3
>AF000264-8|AAK70649.2| 165|Caenorhabditis elegans Hypothetical
protein F43E2.11 protein.
Length = 165
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +3
Query: 54 NMDEIEKERIAALPSQILVTTICHPMEYAKVLIQLGYEPLAPR--RSTTLFGRPAMILPN 227
N+D + + I + ++ T HP+ + LIQ GYEP R FG ILPN
Sbjct: 61 NLDHLRQRSIQSEFQTLVAMTSVHPITVVRELIQFGYEPFPTTCGRKYIFFGEEMAILPN 120
Query: 228 VFQYIKYIKASDGFFGCYRGLSA 296
+ Y+K + + F ++GL +
Sbjct: 121 ILSYMKQLSKAKKFSTLFKGLDS 143
>AF000264-10|AAC71129.2| 272|Caenorhabditis elegans Hypothetical
protein F43E2.7a protein.
Length = 272
Score = 50.0 bits (114), Expect = 1e-06
Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 6/137 (4%)
Frame = +3
Query: 228 VFQYIKYIKASDGFFGCYRGLSARMLGLIAASQLTSKVIVAVGIDLPEINDPPNIVTDDE 407
+ +K + + G+ + G+ + + L + + + P I P +E
Sbjct: 2 IINLVKQLGTTRGYITLWTGIDSAIAALAVQGIASHRTQQYIDEYYPNIGGPLLNQDKEE 61
Query: 408 PKVED------YIKLGRRDMIMQTVAVVIAHPFHVVSVRMMASFIGKEEHYSSLLGAIVS 569
++ D I+ G RD +++ VAV A PF V R +A IG E Y++ A+
Sbjct: 62 DELTDAESFRRVIRNGFRDSVIRVVAVTAARPFAVCFARQVAQVIGNETKYTTCAQALAV 121
Query: 570 IYKDDGILGFLHGLIPK 620
I K +G G GL P+
Sbjct: 122 IGKQEGPGGLFSGLAPQ 138
>Z79755-2|CAB02107.1| 294|Caenorhabditis elegans Hypothetical
protein F43G9.3 protein.
Length = 294
Score = 39.5 bits (88), Expect = 0.002
Identities = 33/134 (24%), Positives = 51/134 (38%)
Frame = +3
Query: 225 NVFQYIKYIKASDGFFGCYRGLSARMLGLIAASQLTSKVIVAVGIDLPEINDPPNIVTDD 404
+ ++IK +GFF YRG SA M ++V+ + ++ D
Sbjct: 54 SAIKFIKLTYRENGFFALYRGNSATM----------ARVVPYASMQFAAFEQYKKLLKVD 103
Query: 405 EPKVEDYIKLGRRDMIMQTVAVVIAHPFHVVSVRMMASFIGKEEHYSSLLGAIVSIYKDD 584
E +K + T A +I +P R+ S + YSSL V YK+
Sbjct: 104 ENGSRTPVKRYITGSLAATTATMITYPLDTAKARLSVS---SKLQYSSLKHVFVKTYKEG 160
Query: 585 GILGFLHGLIPKXL 626
GI G+ P L
Sbjct: 161 GIQLLYRGIYPTIL 174
>Z49207-2|CAA89069.1| 298|Caenorhabditis elegans Hypothetical
protein R07E3.4 protein.
Length = 298
Score = 38.7 bits (86), Expect = 0.003
Identities = 31/129 (24%), Positives = 57/129 (44%)
Frame = +3
Query: 240 IKYIKASDGFFGCYRGLSARMLGLIAASQLTSKVIVAVGIDLPEINDPPNIVTDDEPKVE 419
+K IKAS+G Y+GLS+ + +IA+ + + ++ + ++PK
Sbjct: 163 LKKIKASEGVASWYKGLSSALQFVIASRAIFFGIFDSIRTSV------------EDPKSL 210
Query: 420 DYIKLGRRDMIMQTVAVVIAHPFHVVSVRMMASFIGKEEHYSSLLGAIVSIYKDDGILGF 599
++ I T + ++ +P V MM + + Y+S ++YK DGI GF
Sbjct: 211 NFAACWAIAQISITTSGMVCYPLDTVRRSMMMQSGKQIKQYTSTKDCWKTLYKKDGINGF 270
Query: 600 LHGLIPKXL 626
G + L
Sbjct: 271 YRGALTNSL 279
>Z22180-4|CAA80178.1| 312|Caenorhabditis elegans Hypothetical
protein K11H3.3 protein.
Length = 312
Score = 29.5 bits (63), Expect = 2.1
Identities = 24/69 (34%), Positives = 28/69 (40%)
Frame = +3
Query: 117 ICHPMEYAKVLIQLGYEPLAPRRSTTLFGRPAMILPNVFQYIKYIKASDGFFGCYRGLSA 296
I P EY K +QL R +T F P +K GFFG YRGLS
Sbjct: 42 ITFPTEYVKTQLQLD-----ERSATPKFRGP-------IDCVKQTVNGHGFFGLYRGLSV 89
Query: 297 RMLGLIAAS 323
+ G I S
Sbjct: 90 LLYGSIPKS 98
>U00052-8|AAK21421.2| 707|Caenorhabditis elegans Hypothetical
protein K02F3.2 protein.
Length = 707
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Frame = +3
Query: 480 HPFHVVSVRMM-----ASFIGKEEHYSSLLGAIVSIYKDDGILGFLHGLIPK 620
+P +V RM SF+G E Y + L + K +G+LG GL+P+
Sbjct: 388 YPIDLVKTRMQNQRTSGSFVG-EVMYKNSLDCFKKVVKFEGLLGLYRGLLPQ 438
>AC091267-3|AAK31563.3| 339|Caenorhabditis elegans Hypothetical
protein Y37B11A.3 protein.
Length = 339
Score = 29.5 bits (63), Expect = 2.1
Identities = 24/69 (34%), Positives = 28/69 (40%)
Frame = +3
Query: 117 ICHPMEYAKVLIQLGYEPLAPRRSTTLFGRPAMILPNVFQYIKYIKASDGFFGCYRGLSA 296
I P EY K +QL R +T F P +K GFFG YRGLS
Sbjct: 28 ITFPTEYVKTQLQLD-----ERSATPKFRGP-------IDCVKQTVNGHGFFGLYRGLSV 75
Query: 297 RMLGLIAAS 323
+ G I S
Sbjct: 76 LLYGSIPKS 84
>Z75532-5|CAD56651.1| 360|Caenorhabditis elegans Hypothetical
protein C54G10.4b protein.
Length = 360
Score = 28.7 bits (61), Expect = 3.6
Identities = 25/92 (27%), Positives = 39/92 (42%)
Frame = +3
Query: 123 HPMEYAKVLIQLGYEPLAPRRSTTLFGRPAMILPNVFQYIKYIKASDGFFGCYRGLSARM 302
HP++ KV +Q P R T F K I +GF G Y+G+S+ +
Sbjct: 22 HPLDTVKVRLQTQSGPTPQYRGT-------------FHCFKLIVQKEGFRGLYKGMSSPL 68
Query: 303 LGLIAASQLTSKVIVAVGIDLPEINDPPNIVT 398
L L S + + V G ++ DP +I +
Sbjct: 69 LSL---SAINAIVFGVHGGTCRQMEDPDSITS 97
>Z75532-4|CAA99811.1| 310|Caenorhabditis elegans Hypothetical
protein C54G10.4a protein.
Length = 310
Score = 28.7 bits (61), Expect = 3.6
Identities = 25/92 (27%), Positives = 39/92 (42%)
Frame = +3
Query: 123 HPMEYAKVLIQLGYEPLAPRRSTTLFGRPAMILPNVFQYIKYIKASDGFFGCYRGLSARM 302
HP++ KV +Q P R T F K I +GF G Y+G+S+ +
Sbjct: 22 HPLDTVKVRLQTQSGPTPQYRGT-------------FHCFKLIVQKEGFRGLYKGMSSPL 68
Query: 303 LGLIAASQLTSKVIVAVGIDLPEINDPPNIVT 398
L L S + + V G ++ DP +I +
Sbjct: 69 LSL---SAINAIVFGVHGGTCRQMEDPDSITS 97
>Z48240-1|CAA88283.1| 312|Caenorhabditis elegans DIF-1 protein.
Length = 312
Score = 28.7 bits (61), Expect = 3.6
Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 2/125 (1%)
Frame = +3
Query: 240 IKYIKASDGFFGCYRGLSARMLGLIAASQLTSKVI--VAVGIDLPEINDPPNIVTDDEPK 413
+K + +GFF Y+G++A ++G+ S L + AVG L + DP +T +
Sbjct: 53 VKRTVSKEGFFALYKGMAAPLVGV---SPLFAVFFGGCAVGKWLQQ-TDPSQEMTFIQNA 108
Query: 414 VEDYIKLGRRDMIMQTVAVVIAHPFHVVSVRMMASFIGKEEHYSSLLGAIVSIYKDDGIL 593
G + T+ +V + A G HY L + +YK GI
Sbjct: 109 -----NAGALAGVFTTIVMVPGERIKCLLQVQQAGSAGSGVHYDGPLDVVKKLYKQGGIS 163
Query: 594 GFLHG 608
G
Sbjct: 164 SIYRG 168
>X76115-1|CAA53721.1| 312|Caenorhabditis elegans carrier protein
(c1) protein.
Length = 312
Score = 28.7 bits (61), Expect = 3.6
Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 2/125 (1%)
Frame = +3
Query: 240 IKYIKASDGFFGCYRGLSARMLGLIAASQLTSKVI--VAVGIDLPEINDPPNIVTDDEPK 413
+K + +GFF Y+G++A ++G+ S L + AVG L + DP +T +
Sbjct: 53 VKRTVSKEGFFALYKGMAAPLVGV---SPLFAVFFGGCAVGKWLQQ-TDPSQEMTFIQNA 108
Query: 414 VEDYIKLGRRDMIMQTVAVVIAHPFHVVSVRMMASFIGKEEHYSSLLGAIVSIYKDDGIL 593
G + T+ +V + A G HY L + +YK GI
Sbjct: 109 -----NAGALAGVFTTIVMVPGERIKCLLQVQQAGSAGSGVHYDGPLDVVKKLYKQGGIS 163
Query: 594 GFLHG 608
G
Sbjct: 164 SIYRG 168
>U61949-5|AAB03153.2| 312|Caenorhabditis elegans Differentiation
abnormal protein 1 protein.
Length = 312
Score = 28.7 bits (61), Expect = 3.6
Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 2/125 (1%)
Frame = +3
Query: 240 IKYIKASDGFFGCYRGLSARMLGLIAASQLTSKVI--VAVGIDLPEINDPPNIVTDDEPK 413
+K + +GFF Y+G++A ++G+ S L + AVG L + DP +T +
Sbjct: 53 VKRTVSKEGFFALYKGMAAPLVGV---SPLFAVFFGGCAVGKWLQQ-TDPSQEMTFIQNA 108
Query: 414 VEDYIKLGRRDMIMQTVAVVIAHPFHVVSVRMMASFIGKEEHYSSLLGAIVSIYKDDGIL 593
G + T+ +V + A G HY L + +YK GI
Sbjct: 109 -----NAGALAGVFTTIVMVPGERIKCLLQVQQAGSAGSGVHYDGPLDVVKKLYKQGGIS 163
Query: 594 GFLHG 608
G
Sbjct: 164 SIYRG 168
>Z74028-1|CAA98424.1| 334|Caenorhabditis elegans Hypothetical
protein C14C10.1 protein.
Length = 334
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 483 PFHVVSVRMMASFIGKEEHYSSLLGAIVSIYKDDGILGFLHGLIP 617
PF V VRM S + ++ + IYK +G+ GF GL P
Sbjct: 152 PFEAVKVRMQTSSTAPK----TMRECMPMIYKKEGMYGFFKGLPP 192
>Z69662-5|CAA93500.3| 449|Caenorhabditis elegans Hypothetical
protein F56D5.6 protein.
Length = 449
Score = 27.9 bits (59), Expect = 6.3
Identities = 8/27 (29%), Positives = 19/27 (70%)
Frame = +3
Query: 360 DLPEINDPPNIVTDDEPKVEDYIKLGR 440
++ E+N+ N++ D++ +ED ++L R
Sbjct: 292 NVEEVNESGNVILDEDENIEDNVELAR 318
>U64842-4|AAB37086.2| 306|Caenorhabditis elegans Hypothetical
protein F25B4.7 protein.
Length = 306
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/55 (23%), Positives = 26/55 (47%)
Frame = +3
Query: 450 IMQTVAVVIAHPFHVVSVRMMASFIGKEEHYSSLLGAIVSIYKDDGILGFLHGLI 614
++ +A + ++P V R+M K +++ + I IY +G F HG +
Sbjct: 229 VVTLIAAMTSYPLDTVRRRLMMGAGKKTLPFNNTISCIKYIYTKEGPKAFFHGAL 283
>X76114-1|CAA53720.1| 290|Caenorhabditis elegans
Oxoglutarate/malate carrier protein protein.
Length = 290
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 462 VAVVIAHPFHVVSVRMMASFIGKEEHYSSLLGAI-VSIYKDDGILGFLHGL 611
+A HP ++ V++ GK +G + + IYK+DGIL F +G+
Sbjct: 21 MAACCTHPLDLLKVQLQTQQQGK-----LTIGQLSLKIYKNDGILAFYNGV 66
>U23525-8|AAC46570.1| 290|Caenorhabditis elegans Hypothetical
protein K11G12.5 protein.
Length = 290
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 462 VAVVIAHPFHVVSVRMMASFIGKEEHYSSLLGAI-VSIYKDDGILGFLHGL 611
+A HP ++ V++ GK +G + + IYK+DGIL F +G+
Sbjct: 21 MAACCTHPLDLLKVQLQTQQQGK-----LTIGQLSLKIYKNDGILAFYNGV 66
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,733,128
Number of Sequences: 27780
Number of extensions: 319164
Number of successful extensions: 774
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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