Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11g07
         (623 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q303J1 Cluster: Glycerophosphoryl diester phosphodieste...    33   4.2  
UniRef50_Q1N375 Cluster: Putative uncharacterized protein; n=1; ...    32   9.7  

>UniRef50_Q303J1 Cluster: Glycerophosphoryl diester
           phosphodiesterase; n=3; Streptococcus suis|Rep:
           Glycerophosphoryl diester phosphodiesterase -
           Streptococcus suis 89/1591
          Length = 586

 Score = 33.5 bits (73), Expect = 4.2
 Identities = 18/37 (48%), Positives = 26/37 (70%)
 Frame = -1

Query: 350 LKHNSTILPIVIFLMCWSVIVMPLFRNDRNLNCIYFN 240
           ++H+S  LP V+FL+ +SVI++P  R  R LN  YFN
Sbjct: 120 IRHSS--LPKVLFLLFYSVILLPFLR--RVLNIYYFN 152


>UniRef50_Q1N375 Cluster: Putative uncharacterized protein; n=1;
           Oceanobacter sp. RED65|Rep: Putative uncharacterized
           protein - Oceanobacter sp. RED65
          Length = 350

 Score = 32.3 bits (70), Expect = 9.7
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = -1

Query: 368 QEEWLTLKHNSTILPIVIFLMCWSVIVMPLFRNDRNLNCI 249
           Q  W      +TILP+++F+  +S+ +      +R++NCI
Sbjct: 126 QNLWQVYLAATTILPVIVFISLFSINIKAYLSIERDINCI 165


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 462,812,404
Number of Sequences: 1657284
Number of extensions: 7928868
Number of successful extensions: 18067
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18052
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45636850930
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)