Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11g07
         (623 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0963 + 21904735-21904818,21904922-21905260                       28   6.9  
02_04_0454 + 23064081-23064139,23064297-23064366,23064553-230658...    28   6.9  

>10_08_0963 + 21904735-21904818,21904922-21905260
          Length = 140

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = -3

Query: 483 LPASFCTLISSGVGIEGLSN-MSQLATIEAAQATLEECFSRRMADLEAQLN 334
           L ++  T++  GVG + ++N M Q+A   A   TLE  F +  +++  +LN
Sbjct: 74  LASAAATVVVGGVGADNVTNYMGQMAIAMAMLTTLEN-FLKLRSNINGELN 123


>02_04_0454 +
           23064081-23064139,23064297-23064366,23064553-23065815,
           23065946-23066515
          Length = 653

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = -3

Query: 435 GLSNMSQLATIEAA-QATLEECFSRRMADLEAQLNNTAHC 319
           G+S  +    + A   A L  C  RR  D  A LN+T HC
Sbjct: 112 GMSEAADRGNLAAKLDAFLASCLLRRWKDALAVLNSTRHC 151


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,936,596
Number of Sequences: 37544
Number of extensions: 199122
Number of successful extensions: 460
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 460
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)