Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11g05
         (315 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   1.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.0  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   4.0  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   4.0  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   4.0  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   4.0  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   4.0  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   4.0  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   4.0  
AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax pr...    21   4.0  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   4.0  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   4.0  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    20   5.4  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    20   5.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    20   7.1  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    20   7.1  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 5/14 (35%), Positives = 10/14 (71%)
 Frame = -2

Query: 77   IEPKCWYYIIMPYH 36
            ++P CWY++ +  H
Sbjct: 1554 LDPACWYHLRVTAH 1567


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = -1

Query: 180  TWNDIDSSFYS*QNVY 133
            TW D D+ FY     Y
Sbjct: 1874 TWADFDNKFYEKVTAY 1889



 Score = 20.6 bits (41), Expect = 4.0
 Identities = 8/16 (50%), Positives = 11/16 (68%), Gaps = 1/16 (6%)
 Frame = -1

Query: 195  SLNAH-TWNDIDSSFY 151
            +L  H +W DID+ FY
Sbjct: 2366 TLKPHDSWADIDNEFY 2381


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 5/21 (23%), Positives = 13/21 (61%)
 Frame = +3

Query: 123 YAFNKRFVRNKTMNLYHSMCV 185
           + FN+   R + + + H++C+
Sbjct: 239 FHFNRYLTRRRRIEIAHALCL 259


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 5/21 (23%), Positives = 13/21 (61%)
 Frame = +3

Query: 123 YAFNKRFVRNKTMNLYHSMCV 185
           + FN+   R + + + H++C+
Sbjct: 239 FHFNRYLTRRRRIEIAHALCL 259


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 5/21 (23%), Positives = 13/21 (61%)
 Frame = +3

Query: 123 YAFNKRFVRNKTMNLYHSMCV 185
           + FN+   R + + + H++C+
Sbjct: 261 FHFNRYLTRRRRIEIAHALCL 281


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 5/21 (23%), Positives = 13/21 (61%)
 Frame = +3

Query: 123 YAFNKRFVRNKTMNLYHSMCV 185
           + FN+   R + + + H++C+
Sbjct: 239 FHFNRYLTRRRRIEIAHALCL 259


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 5/21 (23%), Positives = 13/21 (61%)
 Frame = +3

Query: 123 YAFNKRFVRNKTMNLYHSMCV 185
           + FN+   R + + + H++C+
Sbjct: 239 FHFNRYLTRRRRIEIAHALCL 259


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 5/21 (23%), Positives = 13/21 (61%)
 Frame = +3

Query: 123 YAFNKRFVRNKTMNLYHSMCV 185
           + FN+   R + + + H++C+
Sbjct: 195 FHFNRYLTRRRRIEIAHALCL 215


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 5/21 (23%), Positives = 13/21 (61%)
 Frame = +3

Query: 123 YAFNKRFVRNKTMNLYHSMCV 185
           + FN+   R + + + H++C+
Sbjct: 239 FHFNRYLTRRRRIEIAHALCL 259


>AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax
           protein.
          Length = 100

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 5/21 (23%), Positives = 13/21 (61%)
 Frame = +3

Query: 123 YAFNKRFVRNKTMNLYHSMCV 185
           + FN+   R + + + H++C+
Sbjct: 27  FHFNRYLTRRRRIEIAHALCL 47


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 5/21 (23%), Positives = 13/21 (61%)
 Frame = +3

Query: 123 YAFNKRFVRNKTMNLYHSMCV 185
           + FN+   R + + + H++C+
Sbjct: 263 FHFNRYLTRRRRIEIAHALCL 283


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 5/21 (23%), Positives = 13/21 (61%)
 Frame = +3

Query: 123 YAFNKRFVRNKTMNLYHSMCV 185
           + FN+   R + + + H++C+
Sbjct: 239 FHFNRYLTRRRRIEIAHALCL 259


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -2

Query: 110 LIYS*LFDKDRIEPKCWYY 54
           L+ + +F +DR+ P  +YY
Sbjct: 107 LLSNAVFCRDRVNPYLFYY 125


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 170 SFHVCAFKLFLKGNISNCEMN 232
           S H+C       G +S CE+N
Sbjct: 312 SIHLCDVCYSTIGTVSWCELN 332


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 207 PFKNSLNAHTWNDIDSS 157
           P   S  A +W+D D+S
Sbjct: 36  PIDQSAAAASWHDFDNS 52


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 207 PFKNSLNAHTWNDIDSS 157
           P   S  A +W+D D+S
Sbjct: 36  PIDQSAAAASWHDFDNS 52


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,781
Number of Sequences: 336
Number of extensions: 1659
Number of successful extensions: 17
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5836655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)