Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11g02
         (657 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding prot...   107   3e-25
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    25   1.6  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          25   2.8  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   4.9  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   8.5  

>AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding protein
           protein.
          Length = 108

 Score =  107 bits (257), Expect = 3e-25
 Identities = 50/104 (48%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
 Frame = +2

Query: 155 EVVSVPEGC-TTKSKHGDMLTMHYTGTLDDGHKFDSSYDRDQPFTFQIGVGQVIKGWDQG 331
           ++V +  G  TT  K G    +HYTGTLDDG  FDSS  R +PF F +G G+VI+GWD+G
Sbjct: 4   QIVPIANGDQTTFPKPGQTAVVHYTGTLDDGTVFDSSRTRGKPFKFSVGKGEVIRGWDEG 63

Query: 332 LLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFEVELINI 463
           +  M VG++ KL       YG RG   VIPP+A L F+VEL+ +
Sbjct: 64  VAQMSVGQRAKLVCSPDYAYGSRGHPGVIPPNARLTFDVELLRV 107


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
 Frame = -3

Query: 634 NKFIVAFQHLLDVFAYFTTVGGNHLLLQIVAH-FFAGEHVVLIGVDFLEHVCGRWRVTDV 458
           NKF   FQ+L+D +   +    N  L  I+   F  G     +G   +  + G W VT  
Sbjct: 371 NKFTRGFQNLIDAYGIASYREANPALYTIITFPFLFGIMFGDLGHGMIMALFGLWMVTGE 430

Query: 457 DQL 449
            +L
Sbjct: 431 KKL 433


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -2

Query: 443 RNAM*RGEESRCRLRALRNP 384
           R A+ R    RCR RA RNP
Sbjct: 495 RRAIARARRRRCRPRARRNP 514


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +2

Query: 458 NIGDSPPATNVFKEIDADKDNMLSR 532
           N+G  PP ++    +D D+D ++ R
Sbjct: 339 NMGGGPPPSSATPSVDDDEDVVIGR 363


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = +1

Query: 385  GLRRARSRQRDSSPRYIAFRSGVDQHR*LSTGHKRVQGN 501
            G RR+RSR R  S      RSG    +      K V G+
Sbjct: 1159 GSRRSRSRSRSRSGSRSRSRSGSGSRQASPISRKSVSGS 1197


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 698,876
Number of Sequences: 2352
Number of extensions: 14280
Number of successful extensions: 53
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)