Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11g01
         (738 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          25   0.84 
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    24   1.1  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    24   1.1  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    24   1.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    24   1.5  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   4.5  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   5.9  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   5.9  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +3

Query: 381 LSSQTHAQHFVNDGPWQAYTQKVSSKAL 464
           L ++TH+Q     G W+ +T+ + +K L
Sbjct: 140 LRNKTHSQPMQGVGNWERHTKGIGAKLL 167


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -1

Query: 687 QYHKTNPLTLFYHPQHYPRCKHLWEHQS 604
           QY+  NP   +Y+ +++P  ++   HQ+
Sbjct: 349 QYNYPNPQQQYYYNKNHPNSENYINHQN 376


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -1

Query: 687 QYHKTNPLTLFYHPQHYPRCKHLWEHQS 604
           QY+  NP   +Y+ +++P  ++   HQ+
Sbjct: 297 QYNYPNPQQQYYYNKNHPNSENYINHQN 324


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 7/14 (50%), Positives = 13/14 (92%)
 Frame = +3

Query: 492 VQHLQKVYQEISNY 533
           +Q +++VYQ++SNY
Sbjct: 494 IQRMKQVYQQLSNY 507


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -2

Query: 686 SIIKQIH*HCF-TTPNTTPDVNTFGSINLYWVWLLEE 579
           S++ ++    F  T +++ D N FG+  L W++L  E
Sbjct: 395 SVVTKVTCELFQATLSSSSDTNRFGTSGLAWLYLNNE 431


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/25 (32%), Positives = 18/25 (72%)
 Frame = +3

Query: 483 ERVVQHLQKVYQEISNYERPIIQEQ 557
           E +V+HL+++ +E  + +RP+  +Q
Sbjct: 171 EDIVKHLERLREERCDPDRPLPLDQ 195


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 637 VVLGVVKQC*WICFMILCQLKKSSE 711
           +VL +VK C   CF +     KS++
Sbjct: 275 IVLSIVKNCLSYCFNLYHLASKSNQ 299


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 637 VVLGVVKQC*WICFMILCQLKKSSE 711
           +VL +VK C   CF +     KS++
Sbjct: 275 IVLSIVKNCLSYCFNLYHLASKSNQ 299


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,193
Number of Sequences: 336
Number of extensions: 3702
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)