Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11f20
(577 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 181 3e-46
02_04_0462 + 23131433-23132836 180 7e-46
03_01_0548 + 4099386-4099847,4100435-4101316 75 4e-14
03_01_0547 + 4093196-4093657,4094267-4095148 75 4e-14
03_01_0544 + 4082528-4082989,4083585-4084466 75 4e-14
03_01_0543 + 4076981-4077442,4078145-4079026 75 4e-14
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 68 5e-12
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 68 5e-12
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 61 5e-10
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 58 5e-09
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 56 2e-08
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 56 3e-08
12_01_0491 - 3884764-3885114,3885143-3885403,3885493-3885711,388... 54 6e-08
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 52 3e-07
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 50 1e-06
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 49 2e-06
03_05_0511 + 25056018-25059107 48 5e-06
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 48 7e-06
09_04_0730 + 19783346-19783372,19783548-19783638,19783973-197840... 46 3e-05
02_04_0148 - 20198407-20201424 46 3e-05
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 44 9e-05
04_01_0103 + 1082077-1082167,1083037-1085477 44 9e-05
02_04_0017 + 18937774-18937864,18938505-18940945 44 9e-05
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 44 1e-04
01_06_0662 + 30987187-30987277,30987825-30990214 43 2e-04
05_07_0212 + 28434612-28435931,28436012-28436044,28436557-284366... 40 0.001
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 40 0.001
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 31 0.87
02_01_0264 - 1748883-1748888,1748943-1749017,1749453-1749868,175... 29 3.5
11_06_0657 + 25938382-25938443,25938511-25938718,25939222-259392... 28 4.6
10_01_0353 + 3882691-3882937,3883216-3883320,3883780-3883907 28 6.1
11_03_0157 + 10897769-10898066,10898308-10899461 27 8.1
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 181 bits (441), Expect = 3e-46
Identities = 82/110 (74%), Positives = 91/110 (82%)
Frame = +1
Query: 247 FERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINV 426
F RTKPH NVGTIGHVDHGKTTLTAAITKVL++ A+ + +ID APEEKARGITI
Sbjct: 61 FTRTKPHVNVGTIGHVDHGKTTLTAAITKVLAEAGKAKAVAFDEIDKAPEEKARGITIAT 120
Query: 427 AHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
AHVEY+T +RHY H DCPGHADY+KNMITG AQMDG ILVV+A DG MPQ
Sbjct: 121 AHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQ 170
>02_04_0462 + 23131433-23132836
Length = 467
Score = 180 bits (438), Expect = 7e-46
Identities = 81/110 (73%), Positives = 91/110 (82%)
Frame = +1
Query: 247 FERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINV 426
FERTKPH N+GTIGHVDHGKTTLTAA+T VL+ + + K Y +ID APEE+ARGITIN
Sbjct: 64 FERTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDEIDAAPEERARGITINT 123
Query: 427 AHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
A VEY+TE RHY H DCPGHADY+KNMITG AQMDGAILVV+ DG MPQ
Sbjct: 124 ATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQ 173
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 74.9 bits (176), Expect = 4e-14
Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 15/119 (12%)
Frame = +1
Query: 253 RTKPHCNVGTIGHVDHGKTTLTAAIT---------------KVLSDLNLAQKKGYADIDN 387
+ K H N+ IGHVD GK+T T + K +++N K +D
Sbjct: 3 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62
Query: 388 APEEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDG 564
E+ RGITI++A +++T + + D PGH D+IKNMITGT+Q D A+L++ +T G
Sbjct: 63 LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 121
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 74.9 bits (176), Expect = 4e-14
Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 15/119 (12%)
Frame = +1
Query: 253 RTKPHCNVGTIGHVDHGKTTLTAAIT---------------KVLSDLNLAQKKGYADIDN 387
+ K H N+ IGHVD GK+T T + K +++N K +D
Sbjct: 3 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62
Query: 388 APEEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDG 564
E+ RGITI++A +++T + + D PGH D+IKNMITGT+Q D A+L++ +T G
Sbjct: 63 LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 121
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 74.9 bits (176), Expect = 4e-14
Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 15/119 (12%)
Frame = +1
Query: 253 RTKPHCNVGTIGHVDHGKTTLTAAIT---------------KVLSDLNLAQKKGYADIDN 387
+ K H N+ IGHVD GK+T T + K +++N K +D
Sbjct: 3 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62
Query: 388 APEEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDG 564
E+ RGITI++A +++T + + D PGH D+IKNMITGT+Q D A+L++ +T G
Sbjct: 63 LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 121
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 74.9 bits (176), Expect = 4e-14
Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 15/119 (12%)
Frame = +1
Query: 253 RTKPHCNVGTIGHVDHGKTTLTAAIT---------------KVLSDLNLAQKKGYADIDN 387
+ K H N+ IGHVD GK+T T + K +++N K +D
Sbjct: 3 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62
Query: 388 APEEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDG 564
E+ RGITI++A +++T + + D PGH D+IKNMITGT+Q D A+L++ +T G
Sbjct: 63 LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 121
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 68.1 bits (159), Expect = 5e-12
Identities = 42/113 (37%), Positives = 63/113 (55%), Gaps = 15/113 (13%)
Frame = +1
Query: 271 NVGTIGHVDHGKTTLTAAITKVLSDLNL---------AQKKG-----YA-DIDNAPEEKA 405
N+ +GHVD GK+TL+ + +L ++ A++KG YA +D + EE+
Sbjct: 249 NLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSEERE 308
Query: 406 RGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDG 564
RG+T+ VA +T++ D PGH D++ NMI+G Q D AILVV A G
Sbjct: 309 RGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTG 361
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 68.1 bits (159), Expect = 5e-12
Identities = 42/113 (37%), Positives = 63/113 (55%), Gaps = 15/113 (13%)
Frame = +1
Query: 271 NVGTIGHVDHGKTTLTAAITKVLSDLNL---------AQKKG-----YA-DIDNAPEEKA 405
N+ +GHVD GK+TL+ + +L ++ A++KG YA +D + EE+
Sbjct: 249 NLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSEERE 308
Query: 406 RGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDG 564
RG+T+ VA +T++ D PGH D++ NMI+G Q D AILVV A G
Sbjct: 309 RGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTG 361
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 61.3 bits (142), Expect = 5e-10
Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Frame = +1
Query: 346 LNLAQKKG---YA-DIDNAPEEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMIT 513
LNLA KG YA +D + +E+ RGIT+ V + T+ H D PGH D++ NMI+
Sbjct: 272 LNLAIGKGSFAYAWAMDESADERERGITMTVGVAYFDTKNYHVVLLDSPGHKDFVPNMIS 331
Query: 514 GTAQMDGAILVVAATDG 564
G Q D AILV+ A+ G
Sbjct: 332 GATQSDAAILVIDASIG 348
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 58.0 bits (134), Expect = 5e-09
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Frame = +1
Query: 271 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINV--AHVEYQ 444
N I H+DHGK+TL + ++ + + K +DN E+ RGITI + A + Y
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTGTVQKREMKQQF-LDNMDLERERGITIKLQAARMRYI 137
Query: 445 TEQRHY--GHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
Y D PGH D+ + A +GA+LVV A+ GV Q
Sbjct: 138 MNDEPYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQ 183
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 56.4 bits (130), Expect = 2e-08
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Frame = +1
Query: 271 NVGTIGHVDHGKTTLTAAI---TKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEY 441
N+ + HVDHGKTTL ++ KV D + Q++ +D+ E+ RGITI +
Sbjct: 121 NIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVVQER---IMDSNDLERERGITILSKNTSI 177
Query: 442 QTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
+ D PGH+D+ + ++G +LVV + +G MPQ
Sbjct: 178 TYKGTKINIIDTPGHSDFGGEVERVLNMVEGVLLVVDSVEGPMPQ 222
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 55.6 bits (128), Expect = 3e-08
Identities = 33/102 (32%), Positives = 51/102 (50%)
Frame = +1
Query: 271 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTE 450
NV I HVDHGKTTL + + ++ ++ +D+ E+ RGITI +
Sbjct: 66 NVAVIAHVDHGKTTLMDRLLRQCG-ADIPHERA---MDSISLERERGITIASKVTSVSWK 121
Query: 451 QRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
+ D PGHAD+ + ++GA+LVV A +G + Q
Sbjct: 122 ENELNMVDTPGHADFGGEVERVVGMVEGAVLVVDAGEGPLAQ 163
>12_01_0491 -
3884764-3885114,3885143-3885403,3885493-3885711,
3885792-3886019,3886378-3886480,3886703-3886815,
3887262-3887323,3887915-3888104
Length = 508
Score = 54.4 bits (125), Expect = 6e-08
Identities = 43/141 (30%), Positives = 65/141 (46%), Gaps = 25/141 (17%)
Frame = +1
Query: 214 ILKRHYAEKQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLS-------DLNLAQKKGY 372
+ K H ++ R + N+GTIGHV HGK+T+ AI+ V + + N+ K GY
Sbjct: 44 VTKLHPLSPEVISR-QATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGY 102
Query: 373 AD--IDNAPEEKARGITINVAHVEYQTEQ----------------RHYGHTDCPGHADYI 498
A+ I +EK A+ + + RH DCPGH +
Sbjct: 103 ANAKIYKCEDEKCPRPMCYKAYGSGKEDSPHCDVPGFENTRMKLLRHVSFVDCPGHDILM 162
Query: 499 KNMITGTAQMDGAILVVAATD 561
M+ G A MDGA+L++AA +
Sbjct: 163 ATMLNGAAIMDGALLLIAANE 183
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 52.0 bits (119), Expect = 3e-07
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Frame = +1
Query: 271 NVGTIGHVDHGKTTLTAAITKVLSDLN-LAQKKGY----ADIDNAPEEKARGITINVAHV 435
N+G H+D GKTTLT + ++ + + +G A +D+ E+ +GITI A
Sbjct: 70 NIGISAHIDSGKTTLTERVLYYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAAT 129
Query: 436 EYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
D PGH D+ + +DGAILV+ + GV Q
Sbjct: 130 YCTWNGYQVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQ 176
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/67 (35%), Positives = 36/67 (53%)
Frame = +1
Query: 364 KGYADIDNAPEEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAIL 543
K + D+ E K G T+ V ++TE + D PGH Y+ NMI+G +Q D +L
Sbjct: 3 KDHKDLSIKMEPK--GKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVL 60
Query: 544 VVAATDG 564
V++A G
Sbjct: 61 VISARKG 67
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +1
Query: 379 IDNAPEEKARGITINVAHVEYQTEQRHYGHTDCP----GHADYIKNMITGTAQMDGAILV 546
+D EE+ +G T+ V ++TE + D P GH Y+ NMI+G +Q D +LV
Sbjct: 47 MDTNEEERLKGKTVEVGRAHFETETTRFTILDAPVKMKGHKSYVPNMISGASQADIGVLV 106
Query: 547 VAATDG 564
++A G
Sbjct: 107 ISARKG 112
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 48.0 bits (109), Expect = 5e-06
Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 4/103 (3%)
Frame = +1
Query: 271 NVGTIGHVDHGKTTLTAAITKVLSD----LNLAQKKGYADIDNAPEEKARGITINVAHVE 438
N + HVDHGKTTL + D LA + + +D EE+ R IT+ A V
Sbjct: 12 NTCILAHVDHGKTTLADHLVASCGDGLVHPRLAGRLRF--MDYLDEEQRRAITMKSAAVV 69
Query: 439 YQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGV 567
D PGH D+ + + D A+++V A +GV
Sbjct: 70 LHHGGHRVNLIDSPGHIDFCSEVSSAARLSDSALILVDAVEGV 112
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 47.6 bits (108), Expect = 7e-06
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 8/108 (7%)
Frame = +1
Query: 271 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADI---DNAPEEKARGITINVAHVEY 441
NV +GH+ HGKT + + +++ +G + D +E+ R ++I +
Sbjct: 150 NVALVGHLQHGKTVFMDMLVEQTHEVDTFDSEGERHVRFTDTRVDEQERRVSIKAVPMSL 209
Query: 442 QTEQ---RHY--GHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVM 570
E + Y D PGH ++ M DGA+LVV A +GVM
Sbjct: 210 VLEGGNGKSYLCNIMDTPGHVNFSDEMTAALRIADGAVLVVDAAEGVM 257
>09_04_0730 +
19783346-19783372,19783548-19783638,19783973-19784051,
19784410-19784743,19784934-19785968,19786141-19786290,
19786781-19787215
Length = 716
Score = 45.6 bits (103), Expect = 3e-05
Identities = 37/102 (36%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Frame = +1
Query: 274 VGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINV-AHVEYQTE 450
V +GHVDHGKT+L ++ + ++A K+ A GIT ++ A V
Sbjct: 200 VTIMGHVDHGKTSLLDSLRQT----SVAAKE------------AGGITQHIGAFVVEMPS 243
Query: 451 QRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
D PGHA + G A D +LVVAA DGVMPQ
Sbjct: 244 GASITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDGVMPQ 285
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 45.6 bits (103), Expect = 3e-05
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Frame = +1
Query: 271 NVGTIGHVDHGKTTLTAAITKVL-SDLNLAQKK-GYADI-DNAPEEKARGITINVAHVEY 441
N + HVDHGKT+L + S+ ++++ G A + D+ EE+ R IT+ A +
Sbjct: 18 NTCILAHVDHGKTSLADHLIAAYGSERRVSERMAGSARVMDHLEEEQRRAITMKSASIAL 77
Query: 442 QTEQR----HYGHT-DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
+ H H D PGH D+ + D A+++V A +GV Q
Sbjct: 78 RRGGEDGGGHRVHLIDSPGHIDFCSEVSAAARLADSALVLVDAAEGVRVQ 127
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 44.0 bits (99), Expect = 9e-05
Identities = 37/120 (30%), Positives = 50/120 (41%), Gaps = 18/120 (15%)
Frame = +1
Query: 271 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYAD---IDNAPEEKARGITI------- 420
N I HVDHGK+TL + ++ + KKG+ +D E+ RGIT+
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTGTI----KKGHGQPQYLDKLQVERERGITVKAQTATM 114
Query: 421 ------NVAHVEYQTEQRHY--GHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
N Q + Y D PGH D+ + A GA+LVV A GV Q
Sbjct: 115 FYRHANNQLPASDQPDAPSYLLNLIDTPGHVDFSYEVSRSLAACQGALLVVDAAQGVQAQ 174
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 44.0 bits (99), Expect = 9e-05
Identities = 35/129 (27%), Positives = 53/129 (41%), Gaps = 16/129 (12%)
Frame = +1
Query: 238 KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGIT 417
++I ++ N+ I HVDHGK+TLT ++ + D +E RGIT
Sbjct: 10 RRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGIT 69
Query: 418 INVAHVE------------YQTEQ--RHY--GHTDCPGHADYIKNMITGTAQMDGAILVV 549
I + Y+ E+ Y D PGH D+ + DGA++VV
Sbjct: 70 IKSTGISLFYEMSDESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
Query: 550 AATDGVMPQ 576
+GV Q
Sbjct: 130 DCIEGVCVQ 138
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 44.0 bits (99), Expect = 9e-05
Identities = 35/129 (27%), Positives = 53/129 (41%), Gaps = 16/129 (12%)
Frame = +1
Query: 238 KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGIT 417
++I ++ N+ I HVDHGK+TLT ++ + D +E RGIT
Sbjct: 10 RRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGIT 69
Query: 418 INVAHVE------------YQTEQ--RHY--GHTDCPGHADYIKNMITGTAQMDGAILVV 549
I + Y+ E+ Y D PGH D+ + DGA++VV
Sbjct: 70 IKSTGISLFYEMSDESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
Query: 550 AATDGVMPQ 576
+GV Q
Sbjct: 130 DCIEGVCVQ 138
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 43.6 bits (98), Expect = 1e-04
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 16/118 (13%)
Frame = +1
Query: 271 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVE--YQ 444
N+ I HVDHGK+TLT ++ + D +E RGITI + Y+
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDTRADEAERGITIKSTGISLYYE 80
Query: 445 T--------EQRHYGHT------DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
E + G++ D PGH D+ + DGA++VV +GV Q
Sbjct: 81 MTDAALRSFEGKRDGNSYLINLIDSPGHIDFSSEVTAALRITDGALVVVDCIEGVCVQ 138
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 43.2 bits (97), Expect = 2e-04
Identities = 34/129 (26%), Positives = 54/129 (41%), Gaps = 16/129 (12%)
Frame = +1
Query: 238 KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGIT 417
++I ++ N+ + HVDHGK+TLT ++ + D+ +E RGIT
Sbjct: 10 RRIMDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDSRSDEAERGIT 69
Query: 418 INVAHVEYQTEQ-----RHY-----GH------TDCPGHADYIKNMITGTAQMDGAILVV 549
I + E + Y G+ D PGH D+ + DGA++VV
Sbjct: 70 IKSTGISLYYEMSDESLKSYKGDRDGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
Query: 550 AATDGVMPQ 576
+GV Q
Sbjct: 130 DCIEGVCVQ 138
>05_07_0212 +
28434612-28435931,28436012-28436044,28436557-28436670,
28436767-28437102,28437221-28437283,28437364-28437519,
28437650-28437715,28439074-28439310,28439403-28439678,
28440060-28440248,28440459-28440620
Length = 983
Score = 39.9 bits (89), Expect = 0.001
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Frame = +1
Query: 220 KRHYAEKQIFERTKPHCNVGTI-GHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPE 396
K+ + +++ ++ + + TI GHVDHGKTTL I K S + ++ G
Sbjct: 411 KKEFLDEEDLDKLEDRPPIVTIMGHVDHGKTTLLDYIRK--SKVVASEAGGI-------- 460
Query: 397 EKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
+GI V+ D PGH + G D I+VV+A DGV PQ
Sbjct: 461 --TQGIGAYQVIVQVDGNPHACVFLDTPGHEAFGAMRARGARVTDICIIVVSADDGVRPQ 518
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +1
Query: 283 IGHVDHGKTTLTAAITKVLS-DLNLAQ-KKGYADIDNAPEEKARGITINVAHVEYQTEQR 456
+ H+D GKTT T + + + + ++G +D +E+ RGITI +
Sbjct: 110 MAHIDAGKTTTTERVLYYTGRNYKIGEFQEGTVTMDWMEQEQERGITITSPPTTAFWNKH 169
Query: 457 HYGHTDCPGHADYIKNMITGTAQMDGAILVV 549
D PGH D+ + +DGAI+ +
Sbjct: 170 RINIIDTPGHVDFTLEVERALRVLDGAIMSI 200
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 30.7 bits (66), Expect = 0.87
Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 2/100 (2%)
Frame = +1
Query: 283 IGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTEQRHY 462
+GHVD GKT L I + +++ + G A I ++ +
Sbjct: 705 LGHVDTGKTKLLDCIRR--TNVQEGEAGGITQQIGATYFPTENIRERTKELKADATLKVP 762
Query: 463 GHT--DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
G D PGH + G++ D AILVV G+ PQ
Sbjct: 763 GLLVIDTPGHESFSNLRSRGSSLCDIAILVVDIMHGLEPQ 802
>02_01_0264 -
1748883-1748888,1748943-1749017,1749453-1749868,
1750095-1750215,1750423-1750533,1750636-1750737,
1750896-1750989,1751145-1751194,1751323-1751424,
1751794-1751871,1751999-1752028,1752322-1753050
Length = 637
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +1
Query: 196 LTPLSIILKRHYAE-KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGY 372
+T + +K H E ++ F P C++ HVD T L + K+ DL++ + GY
Sbjct: 198 VTSMDRYVKYHVREFERAFAVKFPACSIAAKRHVDQSTTILDVSGVKLNFDLHVCE--GY 255
Query: 373 ADIDNAPEE 399
+ + A +
Sbjct: 256 KNFNKAARD 264
>11_06_0657 +
25938382-25938443,25938511-25938718,25939222-25939268,
25939473-25939805,25940529-25940613,25940689-25940884,
25941012-25941182,25941261-25941318,25941429-25941657,
25942296-25943183
Length = 758
Score = 28.3 bits (60), Expect = 4.6
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +3
Query: 492 LH*EHDYRHSTNGWCHISSSCN 557
+H EH+ H++NG C++ SC+
Sbjct: 281 VHQEHESFHTSNGNCYLKGSCS 302
>10_01_0353 + 3882691-3882937,3883216-3883320,3883780-3883907
Length = 159
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1
Query: 193 GLTPLSIILKRHYAEKQIFERTKPH 267
GLTPLS I E +I ERT+ H
Sbjct: 67 GLTPLSAITGSELPEPRIMERTRRH 91
>11_03_0157 + 10897769-10898066,10898308-10899461
Length = 483
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -3
Query: 389 ALSISA*PFFCARLRSDNTLVIAAVSVVFP*STCPIVPTLQWGFV 255
AL++S P+F L +LV A+S++FP C ++WG V
Sbjct: 403 ALALSV-PYFQYVLSLTGSLVSVAISIIFP---CAFYLKIRWGRV 443
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,040,902
Number of Sequences: 37544
Number of extensions: 290187
Number of successful extensions: 654
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 641
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1340735508
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -