Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11f20
(577 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 190 8e-49
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 190 8e-49
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 190 8e-49
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 148 3e-36
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 148 3e-36
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 75 5e-14
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 75 5e-14
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 75 5e-14
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 73 1e-13
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 73 1e-13
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 73 1e-13
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 67 7e-12
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 60 8e-10
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 58 3e-09
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 53 1e-07
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 51 5e-07
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 51 5e-07
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 46 2e-05
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 43 1e-04
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 43 1e-04
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 40 0.001
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 36 0.021
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 33 0.11
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 33 0.11
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 30 1.0
Z81016-6|CAB02667.1| 1573|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z48621-13|CAA88549.1| 1573|Caenorhabditis elegans Hypothetical p... 29 1.8
AL132860-11|CAB60517.1| 440|Caenorhabditis elegans Hypothetical... 28 4.1
AF069986-1|AAC39136.1| 440|Caenorhabditis elegans nitrilase and... 28 4.1
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 4.1
Z75956-1|CAB00128.2| 489|Caenorhabditis elegans Hypothetical pr... 27 9.5
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 190 bits (462), Expect = 8e-49
Identities = 89/127 (70%), Positives = 103/127 (81%), Gaps = 3/127 (2%)
Frame = +1
Query: 205 LSIILKRHYAE---KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYA 375
+S++ RH A K +F+R KPH NVGTIGHVDHGKTTLT+AITK+L+ A+ + Y
Sbjct: 26 VSLMQARHLAVPGGKAVFKRDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYE 85
Query: 376 DIDNAPEEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAA 555
DIDNAPEEKARGITIN H+EY+T +RHY H DCPGHADYIKNMITG AQM+GAILVVAA
Sbjct: 86 DIDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAA 145
Query: 556 TDGVMPQ 576
TDG MPQ
Sbjct: 146 TDGPMPQ 152
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 190 bits (462), Expect = 8e-49
Identities = 89/127 (70%), Positives = 103/127 (81%), Gaps = 3/127 (2%)
Frame = +1
Query: 205 LSIILKRHYAE---KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYA 375
+S++ RH A K +F+R KPH NVGTIGHVDHGKTTLT+AITK+L+ A+ + Y
Sbjct: 27 VSLMQARHLAVPGGKAVFKRDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYE 86
Query: 376 DIDNAPEEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAA 555
DIDNAPEEKARGITIN H+EY+T +RHY H DCPGHADYIKNMITG AQM+GAILVVAA
Sbjct: 87 DIDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAA 146
Query: 556 TDGVMPQ 576
TDG MPQ
Sbjct: 147 TDGPMPQ 153
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 190 bits (462), Expect = 8e-49
Identities = 89/127 (70%), Positives = 103/127 (81%), Gaps = 3/127 (2%)
Frame = +1
Query: 205 LSIILKRHYAE---KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYA 375
+S++ RH A K +F+R KPH NVGTIGHVDHGKTTLT+AITK+L+ A+ + Y
Sbjct: 27 VSLMQARHLAVPGGKAVFKRDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYE 86
Query: 376 DIDNAPEEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAA 555
DIDNAPEEKARGITIN H+EY+T +RHY H DCPGHADYIKNMITG AQM+GAILVVAA
Sbjct: 87 DIDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAA 146
Query: 556 TDGVMPQ 576
TDG MPQ
Sbjct: 147 TDGPMPQ 153
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 148 bits (358), Expect = 3e-36
Identities = 67/106 (63%), Positives = 83/106 (78%)
Frame = +1
Query: 259 KPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVE 438
K + NVGTIGH+DHGKTTLT+AIT+V + A+ + +ID EEK RGITINVAH+
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHIKFDEIDKGKEEKKRGITINVAHIG 102
Query: 439 YQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
Y++ R Y HTDCPGH+D+IKNMI GT+QMD A+LV+AATDGVM Q
Sbjct: 103 YESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVMEQ 148
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 148 bits (358), Expect = 3e-36
Identities = 67/106 (63%), Positives = 83/106 (78%)
Frame = +1
Query: 259 KPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVE 438
K + NVGTIGH+DHGKTTLT+AIT+V + A+ + +ID EEK RGITINVAH+
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHIKFDEIDKGKEEKKRGITINVAHIG 102
Query: 439 YQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
Y++ R Y HTDCPGH+D+IKNMI GT+QMD A+LV+AATDGVM Q
Sbjct: 103 YESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVMEQ 148
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 74.5 bits (175), Expect = 5e-14
Identities = 47/119 (39%), Positives = 66/119 (55%), Gaps = 15/119 (12%)
Frame = +1
Query: 253 RTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNL---------AQKKG-----YADI-DN 387
+ K H N+ IGHVD GK+T T + ++ AQ+ G YA + D
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 388 APEEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDG 564
E+ RGITI++A +++T + + D PGH D+IKNMITGT+Q D A+LVVA G
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTG 121
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 74.5 bits (175), Expect = 5e-14
Identities = 47/119 (39%), Positives = 66/119 (55%), Gaps = 15/119 (12%)
Frame = +1
Query: 253 RTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNL---------AQKKG-----YADI-DN 387
+ K H N+ IGHVD GK+T T + ++ AQ+ G YA + D
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 388 APEEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDG 564
E+ RGITI++A +++T + + D PGH D+IKNMITGT+Q D A+LVVA G
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTG 121
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 74.5 bits (175), Expect = 5e-14
Identities = 47/119 (39%), Positives = 66/119 (55%), Gaps = 15/119 (12%)
Frame = +1
Query: 253 RTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNL---------AQKKG-----YADI-DN 387
+ K H N+ IGHVD GK+T T + ++ AQ+ G YA + D
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 388 APEEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDG 564
E+ RGITI++A +++T + + D PGH D+IKNMITGT+Q D A+LVVA G
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTG 121
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 73.3 bits (172), Expect = 1e-13
Identities = 46/115 (40%), Positives = 65/115 (56%), Gaps = 15/115 (13%)
Frame = +1
Query: 253 RTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNL---------AQKKG-----YADI-DN 387
+ K H N+ IGHVD GK+T T + ++ AQ+ G YA + D
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 388 APEEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVA 552
E+ RGITI++A +++T + + D PGH D+IKNMITGT+Q D A+LVVA
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 72.9 bits (171), Expect = 1e-13
Identities = 43/113 (38%), Positives = 60/113 (53%), Gaps = 15/113 (13%)
Frame = +1
Query: 271 NVGTIGHVDHGKTTLTAAITKVLSDLNL---------AQKKGYAD------IDNAPEEKA 405
N+ +GHVD GK+TL + L ++ A + G A +D EE+
Sbjct: 172 NLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERE 231
Query: 406 RGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDG 564
RG+T+++ ++T R D PGH D+I NMITGT+Q D AILVV AT G
Sbjct: 232 RGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTG 284
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 72.9 bits (171), Expect = 1e-13
Identities = 43/113 (38%), Positives = 60/113 (53%), Gaps = 15/113 (13%)
Frame = +1
Query: 271 NVGTIGHVDHGKTTLTAAITKVLSDLNL---------AQKKGYAD------IDNAPEEKA 405
N+ +GHVD GK+TL + L ++ A + G A +D EE+
Sbjct: 190 NLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERE 249
Query: 406 RGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDG 564
RG+T+++ ++T R D PGH D+I NMITGT+Q D AILVV AT G
Sbjct: 250 RGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTG 302
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 67.3 bits (157), Expect = 7e-12
Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 15/117 (12%)
Frame = +1
Query: 259 KPHCNVGTIGHVDHGKTTLTAAI---TKVLSDLNL------AQKKGYAD------IDNAP 393
K H N+ +GHVD GK+T+ + T ++ L A++KG +D
Sbjct: 107 KEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMDTND 166
Query: 394 EEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDG 564
EE+ +G T+ V ++TE+RH+ D PGH ++ NMI G Q D A+LV++A G
Sbjct: 167 EEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRG 223
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 60.5 bits (140), Expect = 8e-10
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Frame = +1
Query: 271 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQK--KGYADIDNAPEEKARGITINVAHVEYQ 444
N+G I HVD GKTT+T + + +++A KG D E+ RGIT+ A V
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHVAGHVDKGNTVTDFLDIERERGITVQSAAVNLD 86
Query: 445 TEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
+ D PGH D+ + +DG ++V+ + GV PQ
Sbjct: 87 WKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAGVQPQ 130
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 58.4 bits (135), Expect = 3e-09
Identities = 33/102 (32%), Positives = 48/102 (47%)
Frame = +1
Query: 271 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTE 450
N G + HVDHGK+TL + ++ + QK+ +D E+ RGIT+ +
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQM---LDKLQVERERGITVKAQTAALRHR 100
Query: 451 QRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
D PGH D+ + A DG +L+VAA GV Q
Sbjct: 101 GYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQGVQAQ 142
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 53.2 bits (122), Expect = 1e-07
Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 5/107 (4%)
Frame = +1
Query: 271 NVGTIGHVDHGKTTLTAAITKVLSDLN-LAQKKGYADI----DNAPEEKARGITINVAHV 435
N+G H+D GKTT+T I ++ + + +G D+ D E+ RGITI A
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSMHEVRGKDDVGATMDFMDLERQRGITIQSAAT 105
Query: 436 EYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
+ D PGH D+ + +DGA+LV+ GV Q
Sbjct: 106 YVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCGVGGVQSQ 152
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 51.2 bits (117), Expect = 5e-07
Identities = 26/102 (25%), Positives = 48/102 (47%)
Frame = +1
Query: 271 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTE 450
NV + HVDHGKT+ ++ + ++ +D+ +E+ RGIT+ + + E
Sbjct: 22 NVCLVAHVDHGKTSFADSLVSANAVISSRMAGKLRYMDSREDEQTRGITMKSSGISLLCE 81
Query: 451 QRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
D PGH D+ + + D A+L++ +G+ Q
Sbjct: 82 PLLINLIDSPGHVDFSGEVTSALILSDIALLLIDVIEGICSQ 123
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 51.2 bits (117), Expect = 5e-07
Identities = 26/102 (25%), Positives = 48/102 (47%)
Frame = +1
Query: 271 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTE 450
NV + HVDHGKT+ ++ + ++ +D+ +E+ RGIT+ + + E
Sbjct: 22 NVCLVAHVDHGKTSFADSLVSANAVISSRMAGKLRYMDSREDEQTRGITMKSSGISLLCE 81
Query: 451 QRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
D PGH D+ + + D A+L++ +G+ Q
Sbjct: 82 PLLINLIDSPGHVDFSGEVTSALILSDIALLLIDVIEGICSQ 123
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 49.6 bits (113), Expect = 2e-06
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Frame = +1
Query: 271 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQT- 447
N+G +GHVD GKTTLT I ++ S A +A GI N + + T
Sbjct: 15 NLGILGHVDSGKTTLTRRIAELGSTS--------AFDAHATSTTTDGIRRNTLDLGFSTM 66
Query: 448 ---EQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
R DCPGH+ I+ ++ + D AI+++ G+ PQ
Sbjct: 67 TSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQ 112
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 46.0 bits (104), Expect = 2e-05
Identities = 37/121 (30%), Positives = 51/121 (42%), Gaps = 24/121 (19%)
Frame = +1
Query: 271 NVGTIGHVDHGKTTLTAAITKVLS-------DLNLAQKKGYADI-------DNAPEEKAR 408
N+GTIGHV HGK+TL A + V + + N+ K GYA+ P
Sbjct: 42 NIGTIGHVAHGKSTLVKAFSGVHTVKFKRELERNITIKLGYANAKIYRCSNQECPRPGCY 101
Query: 409 GITINVAHVEYQTEQ----------RHYGHTDCPGHADYIKNMITGTAQMDGAILVVAAT 558
+ + E+ RH DCPGH + M+ G A MD A L+VA
Sbjct: 102 RSAGSSTPDRFPCERAGCGGEFTCVRHVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGN 161
Query: 559 D 561
+
Sbjct: 162 E 162
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 43.2 bits (97), Expect = 1e-04
Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 8/111 (7%)
Frame = +1
Query: 262 PHC--NVGTIGHVDHGKTT-LTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITIN--- 423
PH NV GH+ HGKTT L + + + A+ D EK RG +I
Sbjct: 129 PHIMRNVAIAGHLHHGKTTFLDCLMEQTHPEFYRAEDADARFTDILFIEKQRGCSIKSQP 188
Query: 424 VAHVEYQTEQRHY--GHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVM 570
V+ V + + Y D PGH ++ M DG +++V A +GVM
Sbjct: 189 VSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEGVM 239
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 43.2 bits (97), Expect = 1e-04
Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 8/111 (7%)
Frame = +1
Query: 262 PHC--NVGTIGHVDHGKTT-LTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITIN--- 423
PH NV GH+ HGKTT L + + + A+ D EK RG +I
Sbjct: 4 PHIMRNVAIAGHLHHGKTTFLDCLMEQTHPEFYRAEDADARFTDILFIEKQRGCSIKSQP 63
Query: 424 VAHVEYQTEQRHY--GHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVM 570
V+ V + + Y D PGH ++ M DG +++V A +GVM
Sbjct: 64 VSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEGVM 114
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 41.5 bits (93), Expect = 4e-04
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Frame = +1
Query: 271 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQT- 447
N+G +GHVD GKTTLT I ++ S A +A GI N + + T
Sbjct: 15 NLGILGHVDSGKTTLTRRIAELGST--------SAFDAHATSTTTDGIRRNTLDLGFSTM 66
Query: 448 ---EQRHYGHTDCPGHADYIKNMITGTAQMDGAILV 546
R DCPGH+ I+ ++ + D AI++
Sbjct: 67 TSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVI 102
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 40.3 bits (90), Expect = 0.001
Identities = 38/115 (33%), Positives = 47/115 (40%)
Frame = +1
Query: 232 AEKQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARG 411
A + ER P + +GHVDHGKTTL A+ S + + G
Sbjct: 147 ASPKDLERRPPIVTI--MGHVDHGKTTLLDAMRN--SQIAAGEFGGITQ----------- 191
Query: 412 ITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
I VE T+ R D PGHA + G D +LVVAA DGV Q
Sbjct: 192 -HIGAFSVEL-TKGRRVTFLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKEQ 244
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 35.9 bits (79), Expect = 0.021
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 4/102 (3%)
Frame = +1
Query: 283 IGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVE--YQTEQR 456
+GHVD GKT + I + +++ + G A E A I V Q + +
Sbjct: 490 LGHVDTGKTKMLDTIRR--TNVQQGEAGGITQQIGATEVPAEAIKERCRQVRGFLQDQMK 547
Query: 457 HYGHT--DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
G D PGH + G++ D AILVV G+ PQ
Sbjct: 548 IPGFLIIDTPGHESFSNLRTRGSSLCDFAILVVDIMHGLEPQ 589
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 33.5 bits (73), Expect = 0.11
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +1
Query: 238 KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGIT 417
+ + +R + N+ I HVDHGK+TLT ++ + ++ D +E+ R IT
Sbjct: 10 RALMDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCIT 69
Query: 418 I 420
I
Sbjct: 70 I 70
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 472 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
D PGH D+ + DGA++VV GV Q
Sbjct: 116 DSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQ 150
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 33.5 bits (73), Expect = 0.11
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +1
Query: 238 KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGIT 417
+ + +R + N+ I HVDHGK+TLT ++ + ++ D +E+ R IT
Sbjct: 10 RALMDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCIT 69
Query: 418 I 420
I
Sbjct: 70 I 70
Score = 30.7 bits (66), Expect = 0.78
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 472 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
D PGH D+ + DGA++VV GV Q
Sbjct: 116 DSPGHVDFSSEVTAALGVTDGALVVVDCVSGVCVQ 150
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 30.3 bits (65), Expect = 1.0
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 253 RTKPHCNVGTIGHVDHGKTTLT 318
+ K H N+ IGHVD GK+T T
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTT 24
>Z81016-6|CAB02667.1| 1573|Caenorhabditis elegans Hypothetical protein
F21G4.2 protein.
Length = 1573
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 238 KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVL 339
KQ+ KPH VG +G GK+++T ++ +++
Sbjct: 1352 KQLNVEIKPHEKVGIVGRTGAGKSSVTLSLFRII 1385
>Z48621-13|CAA88549.1| 1573|Caenorhabditis elegans Hypothetical
protein F21G4.2 protein.
Length = 1573
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 238 KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVL 339
KQ+ KPH VG +G GK+++T ++ +++
Sbjct: 1352 KQLNVEIKPHEKVGIVGRTGAGKSSVTLSLFRII 1385
>AL132860-11|CAB60517.1| 440|Caenorhabditis elegans Hypothetical
protein Y56A3A.13 protein.
Length = 440
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 329 LRYYLISIWHRKKVMQILTMPPRRRLEVSLLMW 427
+R+ +S+W+RK+ Q+L+ P L L W
Sbjct: 172 VRFPELSLWNRKRGAQLLSFPSAFTLNTGLAHW 204
>AF069986-1|AAC39136.1| 440|Caenorhabditis elegans nitrilase and
fragile histidinetriad fusion protein NitFhit protein.
Length = 440
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 329 LRYYLISIWHRKKVMQILTMPPRRRLEVSLLMW 427
+R+ +S+W+RK+ Q+L+ P L L W
Sbjct: 172 VRFPELSLWNRKRGAQLLSFPSAFTLNTGLAHW 204
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -2
Query: 531 IHLCCAC-NHVLNVVSMTWAVSVSIMPLFCLVFNMSHINSDTSSLLLGGIVNIC 373
IH+C C ++N V ++C+V ++ H N T +L+L + +IC
Sbjct: 224 IHICMMCLRAIMNNKQGFQQVFADTDAIYCIVRSILHQNLRTKTLVLQMLSSIC 277
>Z75956-1|CAB00128.2| 489|Caenorhabditis elegans Hypothetical
protein R31.2a protein.
Length = 489
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 501 EHDYRHSTNGWCHISSSCNR 560
+ +YRHS+NGW + + NR
Sbjct: 37 DKNYRHSSNGWTALHWAANR 56
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,506,288
Number of Sequences: 27780
Number of extensions: 276422
Number of successful extensions: 733
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 723
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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