Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11f20
(577 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 76 3e-16
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 75 7e-16
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 66 2e-13
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 52 4e-09
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 42 4e-06
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 37 2e-04
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 22 3.8
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 22 3.8
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 22 3.8
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 22 5.0
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 22 5.0
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 8.7
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 8.7
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 75.8 bits (178), Expect = 3e-16
Identities = 47/119 (39%), Positives = 67/119 (56%), Gaps = 15/119 (12%)
Frame = +1
Query: 253 RTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNL---------AQKKG-----YADI-DN 387
+ K H N+ IGHVD GK+T T + ++ AQ+ G YA + D
Sbjct: 3 KEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 388 APEEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDG 564
E+ RGITI++A +++T + + D PGH D+IKNMITGT+Q D A+L+VAA G
Sbjct: 63 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 121
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 74.5 bits (175), Expect = 7e-16
Identities = 47/119 (39%), Positives = 67/119 (56%), Gaps = 15/119 (12%)
Frame = +1
Query: 253 RTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNL---------AQKKG-----YADI-DN 387
+ K H N+ IGHVD GK+T T + ++ AQ+ G YA + D
Sbjct: 3 KEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 388 APEEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDG 564
E+ RGITI++A +++T + + D PGH D+IKNMITGT+Q D A+L+VAA G
Sbjct: 63 LKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIG 121
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 66.1 bits (154), Expect = 2e-13
Identities = 30/62 (48%), Positives = 43/62 (69%)
Frame = +1
Query: 379 IDNAPEEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAAT 558
+D E+ RGITI++A +++T + + D PGH D+IKNMITGT+Q D A+L+VAA
Sbjct: 3 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 62
Query: 559 DG 564
G
Sbjct: 63 TG 64
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 52.0 bits (119), Expect = 4e-09
Identities = 23/48 (47%), Positives = 34/48 (70%)
Frame = +1
Query: 421 NVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDG 564
++A +++T + + D PGH D+IKNMITGT+Q D A+L+VAA G
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 48
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 41.9 bits (94), Expect = 4e-06
Identities = 38/106 (35%), Positives = 48/106 (45%)
Frame = +1
Query: 259 KPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVE 438
K H V +GHVDHGKTTL A L + ++A K + I I V
Sbjct: 143 KRHPIVTIMGHVDHGKTTLLDA----LRNTSIA-KSEFGGITQC---------IGAFDVT 188
Query: 439 YQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
++ +R D PGHA +I G D +LVVAA DGV Q
Sbjct: 189 LESGER-VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKEQ 233
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 36.7 bits (81), Expect = 2e-04
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +1
Query: 271 NVGTIGHVDHGKTTLTAAITKV--LSDLNLAQKKGYADIDNAPEEKARG 411
N+GTIGHV HGK+T+ AI+ V + N ++ +D E+ RG
Sbjct: 44 NIGTIGHVAHGKSTIVKAISGVQTVRFKNELERNITIKLDTRAEDSTRG 92
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 22.2 bits (45), Expect = 3.8
Identities = 7/33 (21%), Positives = 18/33 (54%)
Frame = -2
Query: 522 CCACNHVLNVVSMTWAVSVSIMPLFCLVFNMSH 424
CC + ++ ++ V+ ++ PL +FN+ +
Sbjct: 356 CCPSDRMVYFITWLGYVNSALNPLIYTIFNLDY 388
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 22.2 bits (45), Expect = 3.8
Identities = 7/33 (21%), Positives = 18/33 (54%)
Frame = -2
Query: 522 CCACNHVLNVVSMTWAVSVSIMPLFCLVFNMSH 424
CC + ++ ++ V+ ++ PL +FN+ +
Sbjct: 356 CCPSDRMVYFITWLGYVNSALNPLIYTIFNLDY 388
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 22.2 bits (45), Expect = 3.8
Identities = 7/33 (21%), Positives = 18/33 (54%)
Frame = -2
Query: 522 CCACNHVLNVVSMTWAVSVSIMPLFCLVFNMSH 424
CC + ++ ++ V+ ++ PL +FN+ +
Sbjct: 356 CCPSDRMVYFITWLGYVNSALNPLIYTIFNLDY 388
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 21.8 bits (44), Expect = 5.0
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 215 IILKGVNPDKTVEFRTFAHWL 153
I+ V DK+ E+R F WL
Sbjct: 102 ILSSNVYIDKSTEYRFFKPWL 122
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 21.8 bits (44), Expect = 5.0
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +3
Query: 501 EHDYRHSTNGWCHISSSCNRWCNAT 575
E DY N W +I S C + + T
Sbjct: 298 ESDYYPDLNEWLYILSGCLYYFSTT 322
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.0 bits (42), Expect = 8.7
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = -3
Query: 200 VNPDKTVEFRTFAH 159
++P K ++F+TF H
Sbjct: 1737 MDPSKAMQFQTFPH 1750
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.0 bits (42), Expect = 8.7
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +1
Query: 457 HYGHTDCPGHAD 492
HYGH PG D
Sbjct: 280 HYGHHPDPGEVD 291
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,353
Number of Sequences: 438
Number of extensions: 3244
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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