Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11f20
(577 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 177 4e-45
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 174 3e-44
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 74 8e-14
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 74 8e-14
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 74 8e-14
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 74 8e-14
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 70 1e-12
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 64 5e-11
At5g13650.2 68418.m01585 elongation factor family protein contai... 59 2e-09
At5g13650.1 68418.m01584 elongation factor family protein contai... 59 2e-09
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 58 3e-09
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 58 3e-09
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 56 2e-08
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 56 2e-08
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 56 2e-08
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 54 7e-08
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 52 2e-07
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 52 2e-07
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 52 2e-07
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 51 5e-07
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 51 5e-07
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 46 1e-05
At5g25230.1 68418.m02991 elongation factor Tu family protein tra... 45 3e-05
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 45 4e-05
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 44 1e-04
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 42 3e-04
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 36 0.019
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 33 0.18
At2g27700.1 68415.m03356 eukaryotic translation initiation facto... 31 0.42
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 31 0.42
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 31 0.55
At3g18180.1 68416.m02313 hypothetical protein contains Pfam doma... 27 9.0
At1g62860.1 68414.m07098 pentatricopeptide (PPR) repeat-containi... 27 9.0
At1g30580.1 68414.m03741 expressed protein 27 9.0
At1g12420.1 68414.m01435 ACT domain-containing protein (ACR8) co... 27 9.0
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 177 bits (431), Expect = 4e-45
Identities = 79/110 (71%), Positives = 89/110 (80%)
Frame = +1
Query: 247 FERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINV 426
FER KPH N+GTIGHVDHGKTTLTAA+T L+ + + K Y +ID APEE+ARGITIN
Sbjct: 73 FERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDEIDAAPEERARGITINT 132
Query: 427 AHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
A VEY+TE RHY H DCPGHADY+KNMITG AQMDGAILVV+ DG MPQ
Sbjct: 133 ATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQ 182
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 174 bits (424), Expect = 3e-44
Identities = 79/110 (71%), Positives = 88/110 (80%)
Frame = +1
Query: 247 FERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINV 426
F R KPH NVGTIGHVDHGKTTLTAAITKVL++ A+ + +ID APEEK RGITI
Sbjct: 61 FTRNKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIAT 120
Query: 427 AHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
AHVEY+T +RHY H DCPGHADY+KNMITG AQMDG ILVV+ DG MPQ
Sbjct: 121 AHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMPQ 170
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 73.7 bits (173), Expect = 8e-14
Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 15/119 (12%)
Frame = +1
Query: 253 RTKPHCNVGTIGHVDHGKTTLTAAIT---------------KVLSDLNLAQKKGYADIDN 387
+ K H N+ IGHVD GK+T T + K +++N K +D
Sbjct: 3 KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62
Query: 388 APEEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDG 564
E+ RGITI++A +++T + + D PGH D+IKNMITGT+Q D A+L++ +T G
Sbjct: 63 LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 121
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 73.7 bits (173), Expect = 8e-14
Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 15/119 (12%)
Frame = +1
Query: 253 RTKPHCNVGTIGHVDHGKTTLTAAIT---------------KVLSDLNLAQKKGYADIDN 387
+ K H N+ IGHVD GK+T T + K +++N K +D
Sbjct: 3 KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62
Query: 388 APEEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDG 564
E+ RGITI++A +++T + + D PGH D+IKNMITGT+Q D A+L++ +T G
Sbjct: 63 LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 121
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 73.7 bits (173), Expect = 8e-14
Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 15/119 (12%)
Frame = +1
Query: 253 RTKPHCNVGTIGHVDHGKTTLTAAIT---------------KVLSDLNLAQKKGYADIDN 387
+ K H N+ IGHVD GK+T T + K +++N K +D
Sbjct: 3 KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62
Query: 388 APEEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDG 564
E+ RGITI++A +++T + + D PGH D+IKNMITGT+Q D A+L++ +T G
Sbjct: 63 LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 121
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 73.7 bits (173), Expect = 8e-14
Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 15/119 (12%)
Frame = +1
Query: 253 RTKPHCNVGTIGHVDHGKTTLTAAIT---------------KVLSDLNLAQKKGYADIDN 387
+ K H N+ IGHVD GK+T T + K +++N K +D
Sbjct: 3 KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62
Query: 388 APEEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDG 564
E+ RGITI++A +++T + + D PGH D+IKNMITGT+Q D A+L++ +T G
Sbjct: 63 LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 121
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 70.1 bits (164), Expect = 1e-12
Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 15/113 (13%)
Frame = +1
Query: 271 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYAD---------------IDNAPEEKA 405
N+ +GHVD GK+TL+ + +L ++ Q Y +D + EE+
Sbjct: 241 NLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAEERE 300
Query: 406 RGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDG 564
RGIT+ VA + +++ H D PGH D++ NMI G Q D AILV+ A+ G
Sbjct: 301 RGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVG 353
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 64.5 bits (150), Expect = 5e-11
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 15/117 (12%)
Frame = +1
Query: 259 KPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYAD---------------IDNAP 393
K H NV IGHVD GK+T+ I + ++ Q + Y +D
Sbjct: 99 KRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTNE 158
Query: 394 EEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDG 564
EE+ +G T+ V ++TE + D PGH Y+ NMI+G +Q D +LV++A G
Sbjct: 159 EERLKGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKG 215
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 58.8 bits (136), Expect = 2e-09
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
Frame = +1
Query: 235 EKQIFERTKPHCNVGTIGHVDHGKTTLTAAI---TKVLSDLNLAQKKGYADIDNAPEEKA 405
+KQ+ R N+ + HVDHGKTTL ++ KV D + Q++ +D+ E+
Sbjct: 74 KKQLDRRDNVR-NIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQER---IMDSNDLERE 129
Query: 406 RGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
RGITI + + D PGH+D+ + +DG +LVV + +G MPQ
Sbjct: 130 RGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMPQ 186
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 58.8 bits (136), Expect = 2e-09
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
Frame = +1
Query: 235 EKQIFERTKPHCNVGTIGHVDHGKTTLTAAI---TKVLSDLNLAQKKGYADIDNAPEEKA 405
+KQ+ R N+ + HVDHGKTTL ++ KV D + Q++ +D+ E+
Sbjct: 73 KKQLDRRDNVR-NIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQER---IMDSNDLERE 128
Query: 406 RGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
RGITI + + D PGH+D+ + +DG +LVV + +G MPQ
Sbjct: 129 RGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMPQ 185
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 58.4 bits (135), Expect = 3e-09
Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 5/107 (4%)
Frame = +1
Query: 271 NVGTIGHVDHGKTTLTAAITKVLSDL-NLAQKKGYADIDNAPEEKARGITINV--AHVEY 441
N I H+DHGK+TL + +V + N K+ + +DN E+ RGITI + A + Y
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDMKEQF--LDNMDLERERGITIKLQAARMRY 145
Query: 442 QTEQRHY--GHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
E + D PGH D+ + A +GA+LVV A+ GV Q
Sbjct: 146 VYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQ 192
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 58.4 bits (135), Expect = 3e-09
Identities = 43/120 (35%), Positives = 62/120 (51%), Gaps = 23/120 (19%)
Frame = +1
Query: 271 NVGTIGHVDHGKTTLTAAIT-----KVLSDL--NLAQKKGYADI-----DNAPEEKA--- 405
N+GTIGHV HGK+T+ A++ K S+L N+ K GYA+ + P A
Sbjct: 35 NIGTIGHVAHGKSTIVKAVSGVHTVKFKSELERNITIKLGYANAKIYKCEKCPRPVAYKS 94
Query: 406 --RGITINVA-----HVEYQTEQ-RHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATD 561
G N + H +Y+ + RH DCPGH + M+ G A MDGA+L++AA +
Sbjct: 95 FGSGKEDNPSCDVSGHEKYKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLIIAANE 154
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 56.0 bits (129), Expect = 2e-08
Identities = 48/147 (32%), Positives = 69/147 (46%), Gaps = 25/147 (17%)
Frame = +1
Query: 196 LTPLSIILKRHYAEKQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLS-------DLNL 354
LT L + K H ++ R + N+GTIGHV HGK+T+ AI+ V + + N+
Sbjct: 18 LTKLDVT-KLHPLFPEVISR-QATINIGTIGHVAHGKSTIVKAISGVQTVRFKNELERNI 75
Query: 355 AQKKGYADI-------DNAPEE---------KARGITINVAHVEY--QTEQRHYGHTDCP 480
K GYA+ D P K T +V E T +RH DCP
Sbjct: 76 TIKLGYANAKIYKCEDDKCPRPMCYKSYGSGKEDNPTCDVPGFENCKMTLRRHVSCVDCP 135
Query: 481 GHADYIKNMITGTAQMDGAILVVAATD 561
GH + M+ G A +DGA+L++AA +
Sbjct: 136 GHDILMATMLNGAAIVDGALLLIAANE 162
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 56.0 bits (129), Expect = 2e-08
Identities = 48/147 (32%), Positives = 69/147 (46%), Gaps = 25/147 (17%)
Frame = +1
Query: 196 LTPLSIILKRHYAEKQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLS-------DLNL 354
LT L + K H ++ R + N+GTIGHV HGK+T+ AI+ V + + N+
Sbjct: 18 LTKLDVT-KLHPLFPEVISR-QATINIGTIGHVAHGKSTIVKAISGVQTVRFKNELERNI 75
Query: 355 AQKKGYADI-------DNAPEE---------KARGITINVAHVEY--QTEQRHYGHTDCP 480
K GYA+ D P K T +V E T +RH DCP
Sbjct: 76 TIKLGYANAKIYKCEDDKCPRPMCYKSYGSGKEDNPTCDVPGFENCKMTLRRHVSCVDCP 135
Query: 481 GHADYIKNMITGTAQMDGAILVVAATD 561
GH + M+ G A +DGA+L++AA +
Sbjct: 136 GHDILMATMLNGAAIVDGALLLIAANE 162
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 56.0 bits (129), Expect = 2e-08
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Frame = +1
Query: 259 KPHCNVGTIGHVDHGKTTLTAAITKVLS-DLNLAQ-KKGYADIDNAPEEKARGITINVAH 432
K + N+G + H+D GKTT T I + + + +G A +D +E+ RGITI A
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTGRNYKIGEVHEGTATMDWMEQEQERGITITSAA 153
Query: 433 VEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
++ D PGH D+ + +DGAI + + GV PQ
Sbjct: 154 TTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSVAGVEPQ 201
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 54.0 bits (124), Expect = 7e-08
Identities = 42/122 (34%), Positives = 60/122 (49%), Gaps = 25/122 (20%)
Frame = +1
Query: 271 NVGTIGHVDHGKTTLTAAITKVLS-------DLNLAQKKGYADI-------DNAPEE--- 399
N+GTIGHV HGK+T+ AI+ V + + N+ K GYA+ + P
Sbjct: 35 NIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDEKCPRPMCY 94
Query: 400 KARGI----TINVAHVEYQTEQ----RHYGHTDCPGHADYIKNMITGTAQMDGAILVVAA 555
KA G T N ++ + RH DCPGH + M+ G A MDGA+L++AA
Sbjct: 95 KAYGSGKEDTPNCDVPGFENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAA 154
Query: 556 TD 561
+
Sbjct: 155 NE 156
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 52.4 bits (120), Expect = 2e-07
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Frame = +1
Query: 271 NVGTIGHVDHGKTTLT----AAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVE 438
N+ + HVDHGKTTL A+ + LA K + +D EE+ R IT+ + +
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGGGVLHPRLAGKLRF--MDYLDEEQRRAITMKSSSIS 68
Query: 439 YQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGV 567
+ + D PGH D+ + T DGA+++V A +GV
Sbjct: 69 LKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGV 111
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 52.4 bits (120), Expect = 2e-07
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 5/107 (4%)
Frame = +1
Query: 271 NVGTIGHVDHGKTTLTAAITKVLSDLN-LAQKKGY----ADIDNAPEEKARGITINVAHV 435
N+G H+D GKTTLT + ++ + + +G A +D+ E+ +GITI A
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAAT 126
Query: 436 EYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
+ D PGH D+ + +DGAILV+ + GV Q
Sbjct: 127 YCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQ 173
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 52.4 bits (120), Expect = 2e-07
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 5/107 (4%)
Frame = +1
Query: 271 NVGTIGHVDHGKTTLTAAITKVLSDLN-LAQKKGY----ADIDNAPEEKARGITINVAHV 435
N+G H+D GKTTLT + ++ + + +G A +D+ E+ +GITI A
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAAT 126
Query: 436 EYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
+ D PGH D+ + +DGAILV+ + GV Q
Sbjct: 127 YCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQ 173
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 51.2 bits (117), Expect = 5e-07
Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 8/108 (7%)
Frame = +1
Query: 271 NVGTIGHVDHGKTTLTAAI---TKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEY 441
NV +GH+ HGKT + T +S N +K D +E+ R I+I +
Sbjct: 140 NVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQERNISIKAVPMSL 199
Query: 442 QTEQ---RHY--GHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVM 570
E + Y D PGH ++ M DGA+L+V A +GVM
Sbjct: 200 VLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEGVM 247
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 51.2 bits (117), Expect = 5e-07
Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 8/108 (7%)
Frame = +1
Query: 271 NVGTIGHVDHGKTTLTAAI---TKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEY 441
NV +GH+ HGKT + T +S N +K D +E+ R I+I +
Sbjct: 140 NVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQERNISIKAVPMSL 199
Query: 442 QTEQ---RHY--GHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVM 570
E + Y D PGH ++ M DGA+L+V A +GVM
Sbjct: 200 VLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEGVM 247
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 46.4 bits (105), Expect = 1e-05
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 10/112 (8%)
Frame = +1
Query: 271 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPE-EKARGITINV--AHVEY 441
N I H+DHGK+TL + ++ + KKG+ + ++ RGIT+ A + Y
Sbjct: 68 NFSIIAHIDHGKSTLADRLMELTGTI----KKGHGQPQYLDKLQRERGITVKAQTATMFY 123
Query: 442 QT---EQRHYGHT----DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
+ +Q G+ D PGH D+ + + GA+LVV A GV Q
Sbjct: 124 ENKVEDQEASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQGVQAQ 175
>At5g25230.1 68418.m02991 elongation factor Tu family protein
translation Elongation Factor 2, Schizosaccharomyces
pombe, PIR:T39902
Length = 973
Score = 45.2 bits (102), Expect = 3e-05
Identities = 31/108 (28%), Positives = 45/108 (41%), Gaps = 8/108 (7%)
Frame = +1
Query: 271 NVGTIGHVDHGKTTLTAAI---TKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEY 441
NV +GH+ HGKT + T +S N K D +E+ R I+I +
Sbjct: 126 NVALVGHLQHGKTVFMDMLVEQTHRMSTFNAENDKHMRYTDTRVDEQERNISIKAVPMSL 185
Query: 442 QTEQ---RHY--GHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVM 570
E + Y D PG+ ++ M DGA+ +V A GVM
Sbjct: 186 VLEDSRSKSYLCNIMDTPGNVNFSDEMTASLRLADGAVFIVDAAQGVM 233
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 44.8 bits (101), Expect = 4e-05
Identities = 38/103 (36%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Frame = +1
Query: 274 VGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAH--VEYQT 447
V +GHVDHGKT+L A L + ++A ++ A GIT +V V
Sbjct: 222 VTVMGHVDHGKTSLLDA----LRNTSVAARE------------AGGITQHVGAFVVGMPD 265
Query: 448 EQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
D PGHA + + G A D +LVVAA DGVMPQ
Sbjct: 266 SGTSITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDGVMPQ 308
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 43.6 bits (98), Expect = 1e-04
Identities = 34/118 (28%), Positives = 49/118 (41%), Gaps = 16/118 (13%)
Frame = +1
Query: 271 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVE--YQ 444
N+ I HVDHGK+TLT ++ + D +E RGITI + Y+
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYE 80
Query: 445 -TEQRHYGHT-------------DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
T++ T D PGH D+ + DGA++VV +GV Q
Sbjct: 81 MTDESLKSFTGARDGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQ 138
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 41.9 bits (94), Expect = 3e-04
Identities = 38/120 (31%), Positives = 53/120 (44%), Gaps = 1/120 (0%)
Frame = +1
Query: 220 KRHYAEKQIFERTKPHCNVGTI-GHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPE 396
KR +++ ++ + V TI GHVDHGKTTL I K S + ++ G
Sbjct: 485 KRQTFDEEDLDKLEDRPPVITIMGHVDHGKTTLLDYIRK--SKVAASEAGGIT------- 535
Query: 397 EKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
+GI V + + D PGH + G D AI+VVAA DG+ PQ
Sbjct: 536 ---QGIGAYKVSVPVDGKLQSCVFLDTPGHEAFGAMRARGARVTDIAIIVVAADDGIRPQ 592
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 35.9 bits (79), Expect = 0.019
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 2/100 (2%)
Frame = +1
Query: 283 IGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTEQRHY 462
+GHVD GKT L I +++ + G A A+ I ++ + +
Sbjct: 52 MGHVDSGKTKLLDCIRG--TNVQEGEAGGITQQIGATYFPAKNIRERTRELKADAKLKVP 109
Query: 463 GHT--DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
G D PGH + G++ D AILVV T G+ PQ
Sbjct: 110 GLLVIDTPGHESFTNLRSRGSSLCDLAILVVDITHGLQPQ 149
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 32.7 bits (71), Expect = 0.18
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 2/100 (2%)
Frame = +1
Query: 283 IGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTEQRHY 462
+GHVD GKT L I +++ + G A A+ I ++ + +
Sbjct: 644 MGHVDSGKTKLLDCIRG--TNVQEGEAGGITQQIGATYFPAKNIRERTRELKADAKLKVP 701
Query: 463 GHT--DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
G D PGH + G++ D AILVV G+ PQ
Sbjct: 702 GLLVIDTPGHESFTNLRSRGSSLCDLAILVVDIKHGLEPQ 741
>At2g27700.1 68415.m03356 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|P39730 Translation initiation factor IF-2
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00009: Elongation factor Tu GTP binding domain,
PF03144: Elongation factor Tu domain 2
Length = 479
Score = 31.5 bits (68), Expect = 0.42
Identities = 29/100 (29%), Positives = 40/100 (40%), Gaps = 2/100 (2%)
Frame = +1
Query: 283 IGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTEQR-- 456
+GH+D GKT L IT ++ + G A AR I ++ T+ +
Sbjct: 42 MGHIDTGKTKLLDYIT---GNVQEGEAGGTTQKMGATYLSARNILEKTMELKSDTKLKVP 98
Query: 457 HYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
D PG+ Y G D AILVV G+ PQ
Sbjct: 99 RPLFIDTPGYEFYTNLRSRGLGLCDFAILVVDIMHGLEPQ 138
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 31.5 bits (68), Expect = 0.42
Identities = 28/100 (28%), Positives = 41/100 (41%), Gaps = 2/100 (2%)
Frame = +1
Query: 283 IGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTEQRHY 462
+GHVD GKT L I +++ + G A A I ++ + +
Sbjct: 711 MGHVDTGKTKLLDCIRG--TNVQEGEAGGITQQIGATYFPAENIRERTKELKADAKLKVP 768
Query: 463 GHT--DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
G D PGH + G++ D AILVV G+ PQ
Sbjct: 769 GLLVIDTPGHESFTNLRSRGSSLCDLAILVVDIMHGLEPQ 808
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 31.1 bits (67), Expect = 0.55
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 3/116 (2%)
Frame = +1
Query: 238 KQIFERTK-PHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGI 414
K++ E + P C + +GHVD GKT L I +++ + G A A I
Sbjct: 485 KEVEENLRSPICCI--MGHVDSGKTKLLDCIRG--TNVQEGEAGGITQQIGATFFPAENI 540
Query: 415 TINVAHVEYQTEQRHYGHT--DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQ 576
++ + + G D PGH + G+ D AILVV G+ PQ
Sbjct: 541 RERTKELQANAKLKVPGILVIDTPGHESFTNLRSRGSNLCDLAILVVDIMRGLEPQ 596
>At3g18180.1 68416.m02313 hypothetical protein contains Pfam domain,
PF04577: Protein of unknown function (DUF563)
Length = 470
Score = 27.1 bits (57), Expect = 9.0
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 9/109 (8%)
Frame = +1
Query: 103 TFVKSLVSPAVKLVLKQSQCANVRNSTVLSGLTPLSIILKRHYAEKQIFERTKPHCN-VG 279
T VK +SP + L+ S +R ++ T +I + +E E+ HCN +G
Sbjct: 41 TVVKPYLSPLPIVELQLSVGTGLRMLSITELTTNTTISKEEVISECNKMEKPICHCNTLG 100
Query: 280 TIGHVD-------HGKT-TLTAAITKVLSDLNLAQKKGYADIDNAPEEK 402
+ D HGK+ T+ AA+T S + + YA D P K
Sbjct: 101 SKEFCDVSGDVRIHGKSATVLAAVTFAFSGNSTWYMRPYARKDQVPAMK 149
>At1g62860.1 68414.m07098 pentatricopeptide (PPR) repeat-containing
protein low similarity to fertility restorer [Petunia x
hybrida] GI:22128587; contains Pfam profile PF01535: PPR
repeat
Length = 534
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -3
Query: 215 IILKGVNPDKTVEFRTFAHWLCFKTNFTAGLTKL 114
++ GV PD T+ FR+ LC K GLT L
Sbjct: 487 MVSSGVCPD-TITFRSMLAGLCTKAELQKGLTML 519
>At1g30580.1 68414.m03741 expressed protein
Length = 394
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 235 EKQIFERTKPHCNVGTIGHVDHGKTTLTAAITKV 336
E+ I R H +G +G + GK+TL +TK+
Sbjct: 14 ERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKL 47
>At1g12420.1 68414.m01435 ACT domain-containing protein (ACR8)
contains Pfam ACT domain PF01842
Length = 441
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +1
Query: 268 CNVGTIGHVDHGKTT-LTAAITKVLSDLNLAQKKGYADID 384
C+ TI VD + + ++L+DLNL+ KK Y D
Sbjct: 29 CSSATIVKVDSSRRNGILLEAVQILTDLNLSIKKAYISSD 68
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,448,308
Number of Sequences: 28952
Number of extensions: 244890
Number of successful extensions: 631
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 614
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1121903184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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