Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11f14
(621 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 49 4e-06
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 48 8e-06
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 47 1e-05
SB_18016| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 45 6e-05
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 41 0.001
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15) 39 0.003
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11) 39 0.004
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_21838| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23) 37 0.011
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 37 0.015
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 37 0.015
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.020
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.027
SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07) 36 0.035
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.081
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 33 0.19
SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11) 33 0.25
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 32 0.33
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 32 0.43
SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.57
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.57
SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33) 31 1.00
SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23) 29 3.0
SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28) 29 3.0
SB_54715| Best HMM Match : Hexapep (HMM E-Value=1.2e-05) 28 5.3
SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07) 28 7.0
SB_16504| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_59462| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/79 (29%), Positives = 45/79 (56%)
Frame = +1
Query: 124 YKAYVGNLPSGIIQGDINRIFPDLSIKNVRLVMDKETDKFKGFCYVEFEYLEDLMKAIDL 303
Y+ Y+GNL + + + F + +V+++ D+ET + +GF +V F E++ KAID
Sbjct: 5 YRCYIGNLSYSVDEQALEEKFHGCDVVDVKVITDRETGRPRGFGFVTFGSKEEMEKAIDE 64
Query: 304 NGIINVDGNILKIDVAEEK 360
+ DG +K++ A+ +
Sbjct: 65 FDGQDFDGRPMKVNQAQPR 83
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 47.6 bits (108), Expect = 8e-06
Identities = 26/80 (32%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Frame = +1
Query: 133 YVGNLPSGIIQGDINRIFPDLS-IKNVRLVMDKETDKFKGFCYVEFEYLEDLMKAI-DLN 306
+VGN+P + + IF ++ + + RLV D+ET K KG+ + E++ E + A+ +LN
Sbjct: 28 FVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQETALSAMRNLN 87
Query: 307 GIINVDGNILKIDVAEEKRN 366
G ++G L++D A ++N
Sbjct: 88 G-YELNGRALRVDSAASEKN 106
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Frame = +1
Query: 130 AYVGNLPSGIIQGDINRIF-PDLSIKNVRLVMDKETDKFKGFCYVEFEYLEDLMKAIDLN 306
AYVG L + + ++ F P I +V++ MD T K +GF +VEFE+ ED AID
Sbjct: 7 AYVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAEDTAAAIDNM 66
Query: 307 GIINVDGNILKIDVAE 354
+ G +++++A+
Sbjct: 67 NESELFGRTIRVNLAK 82
>SB_18016| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 573
Score = 46.4 bits (105), Expect = 2e-05
Identities = 17/30 (56%), Positives = 25/30 (83%)
Frame = +1
Query: 106 LPSEPPYKAYVGNLPSGIIQGDINRIFPDL 195
+P+EPP+ A+VGNLP +QGD+++IF DL
Sbjct: 50 MPTEPPFTAFVGNLPINTVQGDLDQIFADL 79
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 44.8 bits (101), Expect = 6e-05
Identities = 21/78 (26%), Positives = 43/78 (55%)
Frame = +1
Query: 127 KAYVGNLPSGIIQGDINRIFPDLSIKNVRLVMDKETDKFKGFCYVEFEYLEDLMKAIDLN 306
K Y+GNL +G+I + F + ++ V ++ DKE+ + +GF +V + + + AI+
Sbjct: 10 KLYIGNLNFNSDEGEIEQAFEEFGVEKVDILRDKESGRSRGFGFVLLQSADQIAPAIEKM 69
Query: 307 GIINVDGNILKIDVAEEK 360
+V G + + +A +K
Sbjct: 70 NQSSVGGRNITVALALDK 87
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 44.8 bits (101), Expect = 6e-05
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +1
Query: 121 PYKAYVGNLPSGIIQGDINRIF-PDLSIKNVRLVMDKETDKFKGFCYVEFEYLEDLMKAI 297
P + YVG+L I + + +F P ++ +V+L+ D ET++ KG+ +V+F E +A+
Sbjct: 241 PTRLYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAM 300
Query: 298 DLNGIINVDGNILKIDVAEEK 360
+ + G LKI E+
Sbjct: 301 EQMNGFELAGRPLKIGPVTER 321
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 44.4 bits (100), Expect = 8e-05
Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +1
Query: 127 KAYVGNLPSGIIQGDINRIFPDLSIKNVRLVMDKETDKFKGFCYVEFEYLEDLMKAI-DL 303
K Y+GNL + + D+ F + +V+++ D+ET + +GF +V F +++ AI +L
Sbjct: 231 KCYIGNLDFKVNEADLQDRFSRYDVVDVQVISDRETQRPRGFAFVTFGSKKNMEDAINEL 290
Query: 304 NGIINVDGNILKIDVAEEK 360
+G DG +K++ A +
Sbjct: 291 DG-QEFDGRSMKVNQARSR 308
Score = 37.1 bits (82), Expect = 0.011
Identities = 21/81 (25%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Frame = +1
Query: 127 KAYVGNLPSGIIQGDINRIFPDLSIK---NVRLVMDKETDKFKGFCYVEFEYLEDLMKAI 297
K V ++P ++ + + +F K +V+++ D+ET + +GF +V F +++ KAI
Sbjct: 8 KCLVASIPLCFVESEADVLFLRNGSKFLLSVKVITDRETGRPRGFGFVTFGSEDEMDKAI 67
Query: 298 DLNGIINVDGNILKIDVAEEK 360
D ++DG +K++ A+ +
Sbjct: 68 DKFDGEDLDGRPMKVNKAQPR 88
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +1
Query: 133 YVGNLPSGIIQGDINRIFPDL-SIKNVRLVMDKETDKFKGFCYVEFEYLEDLMKAIDLN 306
++GNLP I + + +F ++++VRL+ D++T KGF YV FE + ++ A+ +N
Sbjct: 59 FIGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVFALKMN 117
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = +1
Query: 199 IKNVRLVMDKETDKFKGFCYVEFEYLEDLMKAIDLNGIINVDGNILKID 345
I NV LV DK+T K KGFC++ +E + A+D I + G +++D
Sbjct: 5 IVNVNLVRDKKTGKQKGFCFLCYEDQRSTILAVDNFNGIKLGGRTIRVD 53
>SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +1
Query: 133 YVGNLPSGIIQGDINRIFPDLS-IKNVRLVMDKETDKFKGFCYVEFEYLEDLMKAID-LN 306
+V N+ + DI+ +F D IKN+ + +D+ T KG+ VE+E ++ A++ LN
Sbjct: 296 FVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETFKEAQSALEALN 355
Query: 307 GIINVDGNI 333
G + NI
Sbjct: 356 GAEMLGQNI 364
>SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15)
Length = 171
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 121 PYKAYVGNLPSGIIQGDINRIFPDL-SIKNVRLVMDKETDKFKGFCYVEFEYLEDLMKAI 297
P Y+G++P G + +I + F ++ +RL K++ + KG+ +VEF E A
Sbjct: 97 PGVIYLGHIPHGFFENEIKKFFEQFGTVNRIRLSRSKKSARSKGYAFVEFACDEVAKIAA 156
Query: 298 DLNGIINVDGNILK 339
D + G +LK
Sbjct: 157 DTMHNYMMFGRLLK 170
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +1
Query: 187 PDLSI-KNVRLVMDKETDKFKGFCYVEFEYLEDLMKAIDLNGIINVDGNILKIDVAEEKR 363
PDL + + VR+V D +K KGF +V F ED KAI + + G +K + A K
Sbjct: 534 PDLFVAREVRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQVKTNWAARKN 593
Query: 364 N 366
N
Sbjct: 594 N 594
>SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11)
Length = 248
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/58 (27%), Positives = 34/58 (58%)
Frame = +1
Query: 124 YKAYVGNLPSGIIQGDINRIFPDLSIKNVRLVMDKETDKFKGFCYVEFEYLEDLMKAI 297
++ Y+GNL + + + F D ++ +VR++ D+ET + +GF +V E + +K +
Sbjct: 82 HRCYIGNLSYSVDEQALEEKFHDCNVVDVRVITDRETGRPRGFGFVTLEAKKTRIKPL 139
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +1
Query: 133 YVGNLPSGIIQGDINRIFPDL-SIKNVRLVMDKETDKFKGFCYVEFEYLEDLMKAIDLNG 309
YVGNLP + D++++F + V ++ DKET + +G ++ F + A+
Sbjct: 13 YVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFILFIDRQSAQNAVAAVN 72
Query: 310 IINVDGNILKIDVAEE 357
+ G +K +A++
Sbjct: 73 KKQMFGRTIKCTIAKD 88
>SB_21838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 949
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Frame = +1
Query: 193 LSIKNVRLVMDKETDKFKGFCYVEFEYLEDLMKAIDLNGIIN----VDGNIL 336
L I ++RL+ DK T +GFC+VE +E+ + ++L +N +DG ++
Sbjct: 434 LPIYDIRLIKDKVTGTSRGFCFVELATIEEATQLLELIAAMNPPFMIDGRVI 485
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 37.1 bits (82), Expect = 0.011
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Frame = +1
Query: 127 KAYVGNLPSGIIQGDINRIFPDLSI---KNVRLVMDKETDKFKGFCYVEF--EYLED--- 282
K ++G L + D+ LS +++V D+ET+KFKG+C+V F E++ D
Sbjct: 105 KLFIGGLKDEHSEEDVKTALAPLSPFAPLEIKMVRDRETNKFKGYCFVNFPNEHIVDKLY 164
Query: 283 LMKAIDLNG 309
L++ I + G
Sbjct: 165 LVRHIQVKG 173
>SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23)
Length = 44
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +1
Query: 199 IKNVRLVMDKETDKFKGFCYVEFEYLEDLMKAID-LNGI 312
I NV LV DK+T K KGFC++ +E + A+D NGI
Sbjct: 5 IVNVNLVRDKKTGKQKGFCFLCYEDQRSTILAVDNFNGI 43
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 36.7 bits (81), Expect = 0.015
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +1
Query: 109 PSEPPYKAYVGNLPSGIIQGDINRIFPDLS-IKNVRLVMDKETDKFKGFCYVEFEYLEDL 285
P+ P K YV +L + + + IF +K V L D+ + +GF YVE+ E+
Sbjct: 1152 PTPKPTKLYVAHLTRNVNKDHVQEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEEC 1211
Query: 286 MKAIDLNGIINVDGNILKI 342
KA+ +DG + +
Sbjct: 1212 EKALKHMDGGQIDGQEIAV 1230
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 36.7 bits (81), Expect = 0.015
Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Frame = +1
Query: 124 YKAYVGNLPSGIIQGDINRIFPDL-SIKNVRLVMDKETDKFKGFCYVEFEYLEDLMKAI- 297
++ + G+L S + + R F S ++V DK+++K KG+ +V F+ D +KA+
Sbjct: 217 FRIFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDPNDFIKAMR 276
Query: 298 DLNGIINVDGNIL 336
++N + D ++L
Sbjct: 277 EMNVLSFADQHLL 289
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 36.3 bits (80), Expect = 0.020
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 10/84 (11%)
Frame = +1
Query: 121 PYKAYVGNLPSGIIQGDINRIF--PDLSIKNVRLVMD-------KETDKFKGFCYVEFEY 273
P K Y GNLP + Q ++ +F L++ +V +V + ++ + +GF +V F
Sbjct: 49 PNKVYAGNLPFKLTQDELKAVFEAESLTVTDVLIVKEPRNEFYQQQEPRSRGFGFVTFAN 108
Query: 274 LEDLMKAI-DLNGIINVDGNILKI 342
ED A+ LNG V G LKI
Sbjct: 109 PEDAQTAVKSLNG-KEVQGRTLKI 131
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 35.9 bits (79), Expect = 0.027
Identities = 19/74 (25%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +1
Query: 136 VGNLPSGIIQGDINRIFPDL-SIKNVRLVMDKETDKFKGFCYVEFEYLEDLMKAI-DLNG 309
+ +P + Q DI +IF + ++ + +L+ D+ T + G+ +V ++ +D KA+ ++NG
Sbjct: 31 INYVPPSMSQEDIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANKAVREMNG 90
Query: 310 IINVDGNILKIDVA 351
+ LK+ A
Sbjct: 91 -ARLQNKTLKVSFA 103
>SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07)
Length = 252
Score = 35.5 bits (78), Expect = 0.035
Identities = 17/51 (33%), Positives = 32/51 (62%)
Frame = +1
Query: 208 VRLVMDKETDKFKGFCYVEFEYLEDLMKAIDLNGIINVDGNILKIDVAEEK 360
V ++ D+ET + +GF +V F E++ KAID ++DG +K++ A+ +
Sbjct: 125 VNIITDRETGRPRGFGFVTFGSKEEMEKAIDEFDGQDLDGRPMKVNEAKPR 175
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 34.3 bits (75), Expect = 0.081
Identities = 22/85 (25%), Positives = 42/85 (49%)
Frame = +1
Query: 106 LPSEPPYKAYVGNLPSGIIQGDINRIFPDLSIKNVRLVMDKETDKFKGFCYVEFEYLEDL 285
+P++ ++GNL + + F + + V+ +E + +GF Y +F ED
Sbjct: 174 VPAKEEMSVFLGNLSFDADEETLAAFFEEKGLSATCRVITQE-GRSRGFGYADFTSKEDY 232
Query: 286 MKAIDLNGIINVDGNILKIDVAEEK 360
KA++LNG + G ++I+ A K
Sbjct: 233 NKALELNG-EDCCGREIRINPANSK 256
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/52 (25%), Positives = 30/52 (57%)
Frame = +1
Query: 205 NVRLVMDKETDKFKGFCYVEFEYLEDLMKAIDLNGIINVDGNILKIDVAEEK 360
N +++ D+E+ + +GF +V+++ +E K + VDG +++D A +
Sbjct: 314 NAKVIFDRESGESRGFGFVDYDDVETAKKVLSEMAGAEVDGRQVRLDFASPR 365
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 33.9 bits (74), Expect = 0.11
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Frame = +1
Query: 109 PSEPPYKAYVGNLPSGIIQGDINRIF-PDLSIKNVRLVMDKETDKFKGFCYVEFEYLEDL 285
P+ P +VGNLP + + P +I+ + LV + T KG+ +VE+ E+
Sbjct: 108 PAPPESLLFVGNLPFEFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEYATRENA 167
Query: 286 MKAID--LNGIIN-VDGNILKIDVAE 354
M+A LN + G IL++ AE
Sbjct: 168 MQAKQQLLNTASKYIGGRILRVAFAE 193
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 196 SIKNVRLVMDKETDKFKGFCYVEFEYLEDLMKAID-LNGIINVDGNILKI 342
S+ N ++V K + GF +V++ ED KAID LNG + +LK+
Sbjct: 72 SLNNCKIVRHKPSGWSYGFGFVDYNTTEDAQKAIDKLNG-FTIGNKVLKV 120
Score = 31.9 bits (69), Expect = 0.43
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +1
Query: 118 PPYKAYVGNLPSGIIQGDINRIFPDLSIKN-VRLVMDKETDKFKGFCYVEFEYLEDLMKA 294
P YV N+ Q I +F I N V ++ D + + KGFC+V E+ A
Sbjct: 273 PGCTLYVYNIGYDANQEGITALFGQCGIVNKVDIMWDWQRQQCKGFCFVTMATQEEAQNA 332
Query: 295 ID-LNGII 315
I LNG +
Sbjct: 333 IQTLNGFM 340
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +1
Query: 127 KAYVGNLPSGIIQGDINRIFPDLSIKNVRLVMDKE--TDKFKGFCYVEFEYLEDLMKAID 300
+ Y+ ++ +++ DI +F K V + KE T K KG+ ++E+E + AI
Sbjct: 200 RIYIASVHPDLLEDDIKSVFEAFG-KVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAIA 258
Query: 301 LNGIINVDGNILKI 342
+ ++ G L++
Sbjct: 259 SMNLFDLGGQFLRV 272
Score = 31.1 bits (67), Expect = 0.75
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +1
Query: 127 KAYVGNLPSGIIQGDINRIF-PDLSIKNVRLVMDKETDKFKGFCYVEFEYLEDLMKAID- 300
+ YVG++ + + I F P I + L D K KGF +VE++ E A++
Sbjct: 103 RVYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEAAQLALEQ 162
Query: 301 LNGIINVDGNILKI 342
+NG++ + G +K+
Sbjct: 163 MNGVL-LGGRNIKV 175
>SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11)
Length = 67
Score = 32.7 bits (71), Expect = 0.25
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +1
Query: 127 KAYVGNLPSGIIQGDINRIFPDLSIKNVRLVMDKETDKFKGFCYVEFEYLEDLMKAI-DL 303
+ Y+G LP G + D+ + F +R ++ K+ G+ +VEF+Y +D A+ +
Sbjct: 4 RVYLGRLPYGTREDDVKKFFYTYGRFKIREIILKD-----GYGFVEFDYSDDAEDAVYEC 58
Query: 304 NG 309
NG
Sbjct: 59 NG 60
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 32.3 bits (70), Expect = 0.33
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 106 LPSEPPYKAYVGNLPSGIIQGDINRIFPDLSIKNVR 213
+P PP+ A++GNLP + + DI F S+K++R
Sbjct: 271 IPDNPPFTAFLGNLPYDVEREDILEFFS--SVKSLR 304
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 31.9 bits (69), Expect = 0.43
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +1
Query: 127 KAYVGNLPSGIIQGDINRIFPDL--SIKNVRLVMDKETDKFKGFCYVEFEYLEDLMKAID 300
K +VG L I F +K + + + +++ +GFC+V F+ ED + I
Sbjct: 104 KIFVGGLKPETSDEKIREYFGKAYAPVKEIEYITEHSSNRRRGFCFVSFD-SEDTVDKIC 162
Query: 301 LNGIINVDGNILKIDVAEEK 360
N++GN +++ A K
Sbjct: 163 ETQFHNIEGNKVEVKRALPK 182
>SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 31.5 bits (68), Expect = 0.57
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 133 YVGNLPSGIIQGDINRIFPDLSI-KNVRLVMDKETDKFKGFCYVEFE 270
+V NLP + +I +F + K VRLV ++ K KG+ YVE+E
Sbjct: 174 FVSNLPFDAKESEIEELFSKHGVVKQVRLVTNR-AGKPKGYGYVEYE 219
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 31.5 bits (68), Expect = 0.57
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Frame = +1
Query: 127 KAYVGNLPSGIIQGDINRIFPDLSIKNVRL-------VMDKETDKFKGFCYVEFEYLEDL 285
+ YVGN+P G+ + + F + +K +L V+ + + + F ++E +E+
Sbjct: 564 RLYVGNIPFGVTENLMIEFF-NAKMKEAKLNTAPGNPVIAAQINTEQNFAFIELRSVEET 622
Query: 286 MKAIDLNGIINVDGNILKI 342
+A+ +GII + G LKI
Sbjct: 623 TQAMAFDGII-LQGQALKI 640
>SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33)
Length = 662
Score = 30.7 bits (66), Expect = 1.00
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +1
Query: 124 YKAYVGNLPSGIIQGDINRIF 186
++ ++GNLPSG+ D+N +F
Sbjct: 357 HQVFIGNLPSGVKDADVNEVF 377
>SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23)
Length = 362
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = +1
Query: 133 YVGNLPSGIIQGDINRIF-PDLSIKNVRLVMDKETDKFKGFCYVEFEYLEDLMKAID-LN 306
++ +LP D+ + F P ++ + ++ +DK+T+ K F +V ++ + AI +N
Sbjct: 280 FIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQHMN 339
Query: 307 GIINVDGNILKIDVAEEK 360
G + LK+ + K
Sbjct: 340 G-FQIGAKRLKVQLKRPK 356
>SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28)
Length = 419
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 133 YVGNLPSGIIQGDINRIFPDL-SIKNVRLVMDKETDKFKGFCYVEFEYLEDLMKAI 297
Y+ L + D+ R+ +I + + ++DK+T+ KG+ +V+FE KA+
Sbjct: 103 YIRGLKANTTDDDLVRLCHKYGTIISTKAILDKDTNLCKGYGFVDFESPISAQKAV 158
>SB_54715| Best HMM Match : Hexapep (HMM E-Value=1.2e-05)
Length = 1143
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 259 VEFEYLEDLMKAIDLNGIINVDGNI 333
VE + + +L + ++L+GI+ VDGNI
Sbjct: 390 VELDGIVELDEIVELDGIVEVDGNI 414
>SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07)
Length = 97
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 169 DINRIFPDL-SIKNVRLVMDKETDKFKGFCYVEF 267
DI F +I++V +V DK T + +G CYV+F
Sbjct: 38 DIRSAFEQYGTIEDVWVVKDKATKENRGVCYVKF 71
>SB_16504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/47 (23%), Positives = 25/47 (53%)
Frame = +1
Query: 208 VRLVMDKETDKFKGFCYVEFEYLEDLMKAIDLNGIINVDGNILKIDV 348
+ +V + + K +G+ ++E+E+ D+ A +DG + +DV
Sbjct: 35 ISMVYNSKASKPRGYAFIEYEHERDMHAAYKHADGKKIDGRRIVVDV 81
>SB_59462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 184 FPDLSIKNVRLVMDKETDKFKGFCY 258
+PD I V +VM+ +D +G CY
Sbjct: 149 YPDCPICTVEIVMELVSDNVRGLCY 173
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,258,132
Number of Sequences: 59808
Number of extensions: 225713
Number of successful extensions: 551
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 549
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1536271375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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