Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11f13
(273 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 21 1.8
AY769607-1|AAV40983.1| 196|Tribolium castaneum heat shock cogna... 21 1.8
AY769606-1|AAV40982.1| 196|Tribolium castaneum heat shock prote... 21 1.8
DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory pro... 21 3.1
DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein. 21 3.1
AY769608-1|AAV40984.1| 195|Tribolium castaneum heat shock prote... 20 4.1
AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein p... 20 5.4
AY695256-1|AAW21973.1| 168|Tribolium castaneum ventral nerve co... 19 7.2
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 19 9.5
AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein. 19 9.5
AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 19 9.5
AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface pro... 19 9.5
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 21.4 bits (43), Expect = 1.8
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +1
Query: 28 GQNRGGHGPDQRGHAGGREE 87
G RGG RG GG E+
Sbjct: 92 GGGRGGGRDGDRGDGGGEEK 111
>AY769607-1|AAV40983.1| 196|Tribolium castaneum heat shock cognate
70 protein.
Length = 196
Score = 21.4 bits (43), Expect = 1.8
Identities = 8/31 (25%), Positives = 20/31 (64%)
Frame = -1
Query: 171 QVPSSSLNDAPLLQGSTQIPQHXSIPDRFFS 79
++ S++++ L+ GST+IP+ + +F+
Sbjct: 153 KIGKSAVHEIVLVGGSTRIPKVQQLITEYFN 183
>AY769606-1|AAV40982.1| 196|Tribolium castaneum heat shock protein
70 protein.
Length = 196
Score = 21.4 bits (43), Expect = 1.8
Identities = 8/31 (25%), Positives = 20/31 (64%)
Frame = -1
Query: 171 QVPSSSLNDAPLLQGSTQIPQHXSIPDRFFS 79
++ S++++ L+ GST+IP+ + +F+
Sbjct: 153 KIGKSAVHEIVLVGGSTRIPKVQQLITEYFN 183
>DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory
protein 6 protein.
Length = 251
Score = 20.6 bits (41), Expect = 3.1
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -2
Query: 71 ACPR*SGPCPPR 36
AC GPCPP+
Sbjct: 45 ACLLSKGPCPPQ 56
>DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein.
Length = 822
Score = 20.6 bits (41), Expect = 3.1
Identities = 9/25 (36%), Positives = 11/25 (44%)
Frame = +2
Query: 155 EDDGTWKGNDDGKVVNNQPQRVMDE 229
E D WK ND K R +D+
Sbjct: 224 EPDHKWKKNDSSKKKTRYYYRSVDD 248
>AY769608-1|AAV40984.1| 195|Tribolium castaneum heat shock protein
70 protein.
Length = 195
Score = 20.2 bits (40), Expect = 4.1
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -1
Query: 153 LNDAPLLQGSTQIPQHXSIPDRFFSASRMS 64
+++ L+ GST+IP+ + FF ++
Sbjct: 158 IDEIVLVGGSTRIPKIQQLIKDFFDGKELN 187
>AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein
protein.
Length = 287
Score = 19.8 bits (39), Expect = 5.4
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = -3
Query: 100 HPGQILLGLP 71
H GQ+++GLP
Sbjct: 242 HQGQLVVGLP 251
>AY695256-1|AAW21973.1| 168|Tribolium castaneum ventral nerve cord
defective protein protein.
Length = 168
Score = 19.4 bits (38), Expect = 7.2
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = -3
Query: 181 VALPGAVVLFERCSLVARQHADPATFXHPGQILLGLPH 68
VA+P V + C +H DP + PG ++ H
Sbjct: 119 VAVPVLVRDGKPCLSGGPKHPDPGSLQVPGAPMMMSSH 156
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 19.0 bits (37), Expect = 9.5
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -2
Query: 101 PSRTDSSRPP 72
PSR D ++PP
Sbjct: 998 PSREDCTKPP 1007
>AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein.
Length = 209
Score = 19.0 bits (37), Expect = 9.5
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 143 ASFKEDDGTWKGNDDGKVVNNQPQR 217
AS +GT + +DD NQ +R
Sbjct: 158 ASIGSGEGTGEEDDDTNGKKNQKKR 182
>AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein.
Length = 456
Score = 19.0 bits (37), Expect = 9.5
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 143 ASFKEDDGTWKGNDDGKVVNNQPQR 217
AS +GT + +DD NQ +R
Sbjct: 314 ASIGSGEGTGEEDDDTNGKKNQKKR 338
>AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface
protein chaoptin protein.
Length = 782
Score = 19.0 bits (37), Expect = 9.5
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -3
Query: 55 LVHALLDSVQLFSS 14
L HAL SVQ F S
Sbjct: 22 LTHALSSSVQNFPS 35
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,390
Number of Sequences: 336
Number of extensions: 1322
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used: 4471194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
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