Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11f13
(273 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021479-7|CAN99702.1| 234|Caenorhabditis elegans Hypothetical ... 91 1e-19
AL021479-6|CAA16322.2| 207|Caenorhabditis elegans Hypothetical ... 91 1e-19
Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p... 29 0.34
Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr... 29 0.34
U41268-1|AAA82433.2| 234|Caenorhabditis elegans Temporarily ass... 28 0.79
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 27 1.4
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 27 1.4
Z81568-11|CAB04593.1| 681|Caenorhabditis elegans Hypothetical p... 27 2.4
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z69904-4|CAA93779.1| 249|Caenorhabditis elegans Hypothetical pr... 27 2.4
U52001-1|AAA96093.1| 656|Caenorhabditis elegans Feminization of... 27 2.4
J03172-1|AAA28055.1| 656|Caenorhabditis elegans protein ( C.ele... 27 2.4
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 26 3.2
Z46791-1|CAA86761.1| 476|Caenorhabditis elegans Hypothetical pr... 26 3.2
U38378-1|AAA79751.1| 418|Caenorhabditis elegans Hypothetical pr... 26 3.2
AC025716-22|AAK39613.1| 630|Caenorhabditis elegans Zwilch (dros... 26 4.2
Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical pr... 25 5.5
U00055-5|AAL06044.4| 1182|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z81525-8|CAB04257.1| 208|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 25 7.3
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 25 7.3
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 25 7.3
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 25 7.3
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 25 7.3
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 25 7.3
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 25 7.3
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 25 7.3
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ... 25 7.3
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z70034-11|CAA93853.2| 364|Caenorhabditis elegans Hypothetical p... 25 9.7
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 25 9.7
AL161712-8|CAC70133.1| 340|Caenorhabditis elegans Hypothetical ... 25 9.7
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 25 9.7
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 25 9.7
>AL021479-7|CAN99702.1| 234|Caenorhabditis elegans Hypothetical
protein Y22F5A.3b protein.
Length = 234
Score = 91.1 bits (216), Expect = 1e-19
Identities = 43/87 (49%), Positives = 59/87 (67%), Gaps = 2/87 (2%)
Frame = +2
Query: 17 GEQLDRIEEGMDQINADMREAEKNLSGMXKCCGICVLPCNKGASFKEDD--GTWKGNDDG 190
GEQL+R E +D IN DM+EAE +L GM KCCG+CVLP NK F++ + WK +DDG
Sbjct: 81 GEQLERCEGALDTINQDMKEAEDHLKGMEKCCGLCVLPWNKTDDFEKTEFAKAWKKDDDG 140
Query: 191 KVVNNQPQRVMDERNGIGPXAGYIGRI 271
V+++QP R+ + +GP GYI +I
Sbjct: 141 GVISDQP-RITVGDSSMGPQGGYITKI 166
>AL021479-6|CAA16322.2| 207|Caenorhabditis elegans Hypothetical
protein Y22F5A.3a protein.
Length = 207
Score = 91.1 bits (216), Expect = 1e-19
Identities = 43/87 (49%), Positives = 59/87 (67%), Gaps = 2/87 (2%)
Frame = +2
Query: 17 GEQLDRIEEGMDQINADMREAEKNLSGMXKCCGICVLPCNKGASFKEDD--GTWKGNDDG 190
GEQL+R E +D IN DM+EAE +L GM KCCG+CVLP NK F++ + WK +DDG
Sbjct: 54 GEQLERCEGALDTINQDMKEAEDHLKGMEKCCGLCVLPWNKTDDFEKTEFAKAWKKDDDG 113
Query: 191 KVVNNQPQRVMDERNGIGPXAGYIGRI 271
V+++QP R+ + +GP GYI +I
Sbjct: 114 GVISDQP-RITVGDSSMGPQGGYITKI 139
>Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 29.5 bits (63), Expect = 0.34
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2
Query: 44 GMDQINADMREAEK-NLSGMXKCCGICVLPCNK 139
G D IN D+ E + L+G CC C L C++
Sbjct: 1210 GEDHINQDIYECKTCGLTGSLCCCSECALTCHR 1242
>Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical protein
F36A2.13 protein.
Length = 2944
Score = 29.5 bits (63), Expect = 0.34
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2
Query: 44 GMDQINADMREAEK-NLSGMXKCCGICVLPCNK 139
G D IN D+ E + L+G CC C L C++
Sbjct: 1210 GEDHINQDIYECKTCGLTGSLCCCSECALTCHR 1242
>U41268-1|AAA82433.2| 234|Caenorhabditis elegans Temporarily
assigned gene nameprotein 81 protein.
Length = 234
Score = 28.3 bits (60), Expect = 0.79
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 20 EQLDRIEEGMDQINADMREAEKNLSGMXKCCG 115
EQLD+IE + + D+ N++ M CG
Sbjct: 73 EQLDKIEANLSNVIDDLNVVSHNITAMEHYCG 104
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 27.5 bits (58), Expect = 1.4
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -2
Query: 233 CVHPSPAAADC*PPYRHRCPSRC--RRPL*TMLPCCK 129
CV P+P C P + +C +C +P+ P C+
Sbjct: 140 CVAPAPVTVQCVPQCQQKCTQQCVQAQPIQQCQPQCQ 176
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 27.5 bits (58), Expect = 1.4
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -2
Query: 233 CVHPSPAAADC*PPYRHRCPSRC--RRPL*TMLPCCK 129
CV P+P C P + +C +C +P+ P C+
Sbjct: 141 CVAPAPVTVQCVPQCQQKCTQQCVQAQPIQQCQPQCQ 177
>Z81568-11|CAB04593.1| 681|Caenorhabditis elegans Hypothetical
protein K08E3.6 protein.
Length = 681
Score = 26.6 bits (56), Expect = 2.4
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 38 EEGMDQINADMREAEKNLSGMXK 106
EE ++NADMREAE+ L+ K
Sbjct: 55 EESKKRLNADMREAEEALAKARK 77
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 26.6 bits (56), Expect = 2.4
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -2
Query: 233 CVHPSPAAADC*PPYRHRCPSRC--RRPL*TMLPCCK 129
CV +PAA C P + +C +C +P+ P C+
Sbjct: 141 CVVQTPAAVQCVPQCQQQCQQQCVQTQPIQQCQPQCQ 177
>Z69904-4|CAA93779.1| 249|Caenorhabditis elegans Hypothetical
protein ZK20.4 protein.
Length = 249
Score = 26.6 bits (56), Expect = 2.4
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +2
Query: 20 EQLDRIEEGMDQINADMREAEKNLSGMXKCCGICV-LPC-NKGASFKEDDGTWKGNDDGK 193
++LDR E G ++ DM +K+L + C + + C N FK DG K D K
Sbjct: 171 KELDRAELG--SLSRDM---DKSLQFAIRACEMDIPQSCANVSRMFKLGDGVPKDLDQAK 225
Query: 194 VVNNQPQRVMDERNGIGPXAGYIG 265
++ + +M+ AG+ G
Sbjct: 226 KYADRAKEIMETLRSNDTNAGFTG 249
>U52001-1|AAA96093.1| 656|Caenorhabditis elegans Feminization of xx
and xo animalsprotein 1, isoform a protein.
Length = 656
Score = 26.6 bits (56), Expect = 2.4
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = -3
Query: 235 IAFIHHPLR-LIVDHLTVIVALPGAVVLFERCSLVARQHADPATFXHPGQILLGLPHVRV 59
I +HH L I D + + LP A VL + L +A P ILL R
Sbjct: 514 IPLLHHTLEERIPDSNSAELGLPKAAVLEQLLELDLDVNATDKNNDTPMHILLRAREFRK 573
Query: 58 DLVHALL 38
LV ALL
Sbjct: 574 SLVRALL 580
>J03172-1|AAA28055.1| 656|Caenorhabditis elegans protein (
C.elegans fem-1 gene,complete cds. ).
Length = 656
Score = 26.6 bits (56), Expect = 2.4
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = -3
Query: 235 IAFIHHPLR-LIVDHLTVIVALPGAVVLFERCSLVARQHADPATFXHPGQILLGLPHVRV 59
I +HH L I D + + LP A VL + L +A P ILL R
Sbjct: 514 IPLLHHTLEERIPDSNSAELGLPKAAVLEQLLELDLDVNATDKNNDTPMHILLRAREFRK 573
Query: 58 DLVHALL 38
LV ALL
Sbjct: 574 SLVRALL 580
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 26.2 bits (55), Expect = 3.2
Identities = 19/59 (32%), Positives = 22/59 (37%), Gaps = 3/59 (5%)
Frame = -2
Query: 239 SHCVHPSPAAADC*PPYRHRCPSRC---RRPL*TMLPCCKAARRSRNIXPSRTDSSRPP 72
S C PSP A C PP C P + L CCK A N ++ PP
Sbjct: 97 SPCCGPSPVPAPCCPPPPAPAAPCCPPPPPPTPSPLVCCKQAPVPENPCCQIVAAAMPP 155
>Z46791-1|CAA86761.1| 476|Caenorhabditis elegans Hypothetical
protein C09G5.2 protein.
Length = 476
Score = 26.2 bits (55), Expect = 3.2
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 158 DDGTWKGNDDGKVVNNQPQRVMDERNGIGPXAGYIGR 268
+D TWKG +DG ++ + R+GI GY G+
Sbjct: 442 NDRTWKGLNDGVSTAEDSTKMGEGRSGIA--QGYSGK 476
>U38378-1|AAA79751.1| 418|Caenorhabditis elegans Hypothetical
protein R11F4.3 protein.
Length = 418
Score = 26.2 bits (55), Expect = 3.2
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = -2
Query: 167 CRRPL*TMLPCCKAARRSRNIXPSRTDSSRPPACPR*SGPCPPRFCPI 24
C P+ LP + + I P+R+ + A P P PPRF +
Sbjct: 118 CSSPVCNQLPLAQQRQLLTAIAPARSKTVPDLATPELPIPQPPRFAEV 165
>AC025716-22|AAK39613.1| 630|Caenorhabditis elegans Zwilch
(drosophila) homolog protein1 protein.
Length = 630
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 138 REHRSKRTTAPGRATMTVRWSTIS 209
R+ ++ APG T+ VRWST S
Sbjct: 241 RKIATENRPAPGEVTIDVRWSTKS 264
>Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical protein
F43C1.1 protein.
Length = 1036
Score = 25.4 bits (53), Expect = 5.5
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -2
Query: 227 HPSPAAADC*PPYRHRCPSRCRRPL*TMLP 138
HPSP P RHR PS PL + P
Sbjct: 942 HPSPPVPPPIPAIRHRTPSPPPPPLPSSTP 971
>U00055-5|AAL06044.4| 1182|Caenorhabditis elegans Hypothetical
protein R02F2.2 protein.
Length = 1182
Score = 25.4 bits (53), Expect = 5.5
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +2
Query: 134 NKGASFKEDDGTWKGNDDGKV-VNNQPQRV 220
++G S W GNDDG+V V N +RV
Sbjct: 875 DEGTSTAGQTTVWIGNDDGEVFVVNSTERV 904
>Z81525-8|CAB04257.1| 208|Caenorhabditis elegans Hypothetical
protein F33A8.3 protein.
Length = 208
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 28 GQNRGGHGPDQRGHAGGREES 90
G+ RGG G RG GG+ E+
Sbjct: 188 GRGRGGRGRGGRGGQGGQSEA 208
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical
protein T01D3.3b protein.
Length = 1011
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -2
Query: 236 HCVHPSPAAADC*PPYRHRCPSRCRRPL 153
HC HP C +CP+ C RPL
Sbjct: 482 HCEHPLKNYQSC----GSKCPASCDRPL 505
>Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical
protein T01D3.3a protein.
Length = 802
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -2
Query: 236 HCVHPSPAAADC*PPYRHRCPSRCRRPL 153
HC HP C +CP+ C RPL
Sbjct: 273 HCEHPLKNYQSC----GSKCPASCDRPL 296
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -1
Query: 162 SSSLNDAPLLQGSTQIPQHXSIPDRFFSAS 73
++ +++ L+ GSTQ+P I RFF S
Sbjct: 360 TADVDEIVLVGGSTQVPAVRKIVGRFFKKS 389
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +3
Query: 69 CGRPRRICPGWXNVAGSACCLATREHRSKRTTAPGRAT 182
CG P + PG+ + + CCL + +K G T
Sbjct: 412 CGVPCQCQPGYVQCSQNLCCLKYKNMAAKFRKLSGSTT 449
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -2
Query: 77 PPACPR*SGPCPPRFCP 27
PP CP P PP CP
Sbjct: 59 PPMCPPPPPPPPPPMCP 75
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/18 (55%), Positives = 11/18 (61%), Gaps = 1/18 (5%)
Frame = -2
Query: 77 PPACPR*SGP-CPPRFCP 27
PP P P CPP+FCP
Sbjct: 40 PPPLPCPPPPICPPQFCP 57
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 74 PACPR*SGPCPPRFCP 27
P CP PCP +FCP
Sbjct: 52 PVCPP-PPPCPAQFCP 66
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/40 (27%), Positives = 16/40 (40%)
Frame = +2
Query: 140 GASFKEDDGTWKGNDDGKVVNNQPQRVMDERNGIGPXAGY 259
G EDDG + D + N + +DE + P Y
Sbjct: 7584 GEPINEDDGVYTDKDGNVIPTNSEGKPIDENGQVLPKNEY 7623
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/40 (27%), Positives = 16/40 (40%)
Frame = +2
Query: 140 GASFKEDDGTWKGNDDGKVVNNQPQRVMDERNGIGPXAGY 259
G EDDG + D + N + +DE + P Y
Sbjct: 7629 GEPINEDDGVYTDKDGNVIPTNSEGKPIDENGQVLPKNEY 7668
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/40 (27%), Positives = 16/40 (40%)
Frame = +2
Query: 140 GASFKEDDGTWKGNDDGKVVNNQPQRVMDERNGIGPXAGY 259
G EDDG + D + N + +DE + P Y
Sbjct: 7629 GEPINEDDGVYTDKDGNVIPTNSEGKPIDENGQVLPKNEY 7668
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 25.0 bits (52), Expect = 7.3
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Frame = -2
Query: 92 TDSSRPPAC--PR*SGPCPPRFC 30
T S+R P C PR PCP RFC
Sbjct: 1197 TKSTRVPNCDDPR---PCPTRFC 1216
>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
protein Y46B2A.3 protein.
Length = 1145
Score = 25.0 bits (52), Expect = 7.3
Identities = 14/47 (29%), Positives = 16/47 (34%)
Frame = +3
Query: 27 WTESRRAWTRSTRTCGRPRRICPGWXNVAGSACCLATREHRSKRTTA 167
W TR T R GW N A +RE + TTA
Sbjct: 259 WRNGANGTTRDTSRGFTQRPTTAGWRNGANGTTIDTSREFTQRPTTA 305
Score = 25.0 bits (52), Expect = 7.3
Identities = 14/47 (29%), Positives = 16/47 (34%)
Frame = +3
Query: 27 WTESRRAWTRSTRTCGRPRRICPGWXNVAGSACCLATREHRSKRTTA 167
W TR T R GW N A +RE + TTA
Sbjct: 403 WRNGANGTTRDTSRGFTQRPTTAGWRNGANGTTIDTSREFTQRPTTA 449
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -2
Query: 233 CVHPSPAAADC*PPYRHRCPSRC--RRPL*TMLPCCK 129
CV +PA C P + +C +C +P+ P C+
Sbjct: 141 CVVQTPAPVQCVPQCQQQCQQQCVQTQPIQQCQPQCQ 177
>Z70034-11|CAA93853.2| 364|Caenorhabditis elegans Hypothetical
protein C18E9.2a protein.
Length = 364
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 152 KEDDGTWKGNDDGKVVNNQPQRVMDERN 235
K+ + KGND V P+ V+++RN
Sbjct: 99 KKKENKDKGNDSSAEVTKSPKGVVEKRN 126
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1
Query: 37 RGGHGPDQRGHAGGR 81
RGG+G D+ G GGR
Sbjct: 118 RGGYGGDRGGRGGGR 132
>AL161712-8|CAC70133.1| 340|Caenorhabditis elegans Hypothetical
protein Y66D12A.11 protein.
Length = 340
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1
Query: 129 GSTQIPQHXSIPDRFFSASRMSALIWSMPSS 37
GSTQ P+H +IP +M + +S SS
Sbjct: 284 GSTQAPEHSAIPS-ISMIRKMERIFYSSESS 313
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 10 YVRRTIGQNRGGHGPDQRGHAGG 78
Y RR + GH P QRG +GG
Sbjct: 195 YGRRGRRADAAGHYPSQRGGSGG 217
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 17 GEQLDRIEEGMDQINADMREAEKN 88
G++ D++EE DQ N D R+ E +
Sbjct: 3767 GKEDDQVEEDDDQENVDERDREND 3790
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,046,544
Number of Sequences: 27780
Number of extensions: 140077
Number of successful extensions: 583
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 579
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 227290938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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