BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov11f11 (692 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC18H10.12c |rpl701||60S ribosomal protein L7|Schizosaccharomy... 177 9e-46 SPAC3H5.07 |rpl702|rpl7-2, rpl7, rpl7b|60S ribosomal protein L7|... 175 4e-45 SPAC664.06 |rpl703|rpl7|60S ribosomal protein L7|Schizosaccharom... 168 6e-43 SPBC18H10.07 |||WW domain-binding protein 4 |Schizosaccharomyces... 29 0.64 SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 27 2.6 SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 26 4.5 SPAC11D3.07c |||transcription factor|Schizosaccharomyces pombe|c... 25 7.9 >SPBC18H10.12c |rpl701||60S ribosomal protein L7|Schizosaccharomyces pombe|chr 2|||Manual Length = 251 Score = 177 bits (432), Expect = 9e-46 Identities = 86/162 (53%), Positives = 111/162 (68%) Frame = +3 Query: 165 SKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRIKERD 344 SK+ PES+LK + +++++ KK+ I KRAE Y EYR ER+ Sbjct: 10 SKEQIFAPESLLKKKKTQEQSREQRVAAAAEKKAAQQKKRELIAKRAESYDAEYRKAERE 69 Query: 345 EIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVRLNK 524 +I L R+AR GNYYVP E KL FVIRIRGIN + PK RK++QL RL QINNGVFV+ NK Sbjct: 70 QIELGRKARAEGNYYVPDETKLVFVIRIRGINNIPPKARKIMQLLRLIQINNGVFVKFNK 129 Query: 525 ATVNMLRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGQRIPI 650 AT ML++ EPY+ +G PNLK+VREL+YKRGF K++ QRI + Sbjct: 130 ATKEMLQVVEPYVTYGIPNLKTVRELLYKRGFGKVNKQRIAL 171 >SPAC3H5.07 |rpl702|rpl7-2, rpl7, rpl7b|60S ribosomal protein L7|Schizosaccharomyces pombe|chr 1|||Manual Length = 250 Score = 175 bits (427), Expect = 4e-45 Identities = 82/155 (52%), Positives = 108/155 (69%) Frame = +3 Query: 186 PESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRIKERDEIRLARQ 365 PES+LK + +++S+ KK+ I KRAE Y EYR ER++I LAR+ Sbjct: 16 PESLLKKTKAQKQSREQIVAAAAEKKSARQKKRELIAKRAEAYEAEYRAAEREQIELARK 75 Query: 366 ARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNMLR 545 AR GNY+VP E KL FV+RIRGIN + PK RK++QL RL QINNG+FV+ NKA ML+ Sbjct: 76 ARAEGNYFVPHEPKLIFVVRIRGINNIPPKARKIMQLLRLLQINNGIFVKFNKAIKEMLQ 135 Query: 546 IAEPYIAWGYPNLKSVRELVYKRGFAKLSGQRIPI 650 + EPY+ +G PN K+VREL+YKRGF K++ QRIP+ Sbjct: 136 VVEPYVTYGIPNHKTVRELIYKRGFGKVNKQRIPL 170 >SPAC664.06 |rpl703|rpl7|60S ribosomal protein L7|Schizosaccharomyces pombe|chr 1|||Manual Length = 249 Score = 168 bits (409), Expect = 6e-43 Identities = 78/155 (50%), Positives = 106/155 (68%) Frame = +3 Query: 186 PESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRIKERDEIRLARQ 365 PE +LK ++ + ++ + K ++E FKRAE ++ YR +ER+ IRL R Sbjct: 15 PEVLLKKRKVNERTRKERVEQAIAKKEAQKKNRKETFKRAETFINNYRQRERERIRLNRS 74 Query: 366 ARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNMLR 545 A+N+G+ +VP E KL FVIRI G+ + PK+RKVL+L RL +INN VFVR NKA MLR Sbjct: 75 AKNKGDIFVPDETKLLFVIRIAGVKNMPPKIRKVLRLLRLSRINNAVFVRNNKAVAQMLR 134 Query: 546 IAEPYIAWGYPNLKSVRELVYKRGFAKLSGQRIPI 650 I EPY+ +G PNL SVREL+YKRGF K++GQRI + Sbjct: 135 IVEPYVMYGIPNLHSVRELIYKRGFGKINGQRIAL 169 >SPBC18H10.07 |||WW domain-binding protein 4 |Schizosaccharomyces pombe|chr 2|||Manual Length = 224 Score = 29.1 bits (62), Expect = 0.64 Identities = 11/39 (28%), Positives = 25/39 (64%) Frame = +3 Query: 267 SAIKKKREIFKRAEQYVKEYRIKERDEIRLARQARNRGN 383 +++K+ REI ++ E+ +R+K ++ ++ + A N GN Sbjct: 151 TSLKRNREIIEKEERSSFHFRVKPKNLDKVPKLAENEGN 189 >SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium transporting Cta4 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1211 Score = 27.1 bits (57), Expect = 2.6 Identities = 15/40 (37%), Positives = 24/40 (60%) Frame = +3 Query: 366 ARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFRL 485 + N+G YY G +AFV I G+ + SP++ LQL ++ Sbjct: 1133 SENKGMYY--GLLGIAFVA-IAGVTEFSPELNAKLQLVKM 1169 >SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|Schizosaccharomyces pombe|chr 1|||Manual Length = 2397 Score = 26.2 bits (55), Expect = 4.5 Identities = 9/34 (26%), Positives = 18/34 (52%) Frame = +3 Query: 300 RAEQYVKEYRIKERDEIRLARQARNRGNYYVPGE 401 +A Q ++ + +RL N+ N+++PGE Sbjct: 309 KATQMTVDFLVDWAKSVRLCANRFNKSNFFIPGE 342 >SPAC11D3.07c |||transcription factor|Schizosaccharomyces pombe|chr 1|||Manual Length = 603 Score = 25.4 bits (53), Expect = 7.9 Identities = 15/58 (25%), Positives = 25/58 (43%) Frame = +1 Query: 148 SKGRKTVRSCLLYQSQCSSIVRGERLFALGDYRLR*RGVLLPSRRRGKSSRGLNSTSR 321 S+G+ ++C L+Q+ C R R + + G+ LP + K G S R Sbjct: 18 SRGQPRCQTCTLFQADCHYSNRARRKRLVQRSKETFGGITLPVKNIEKPEDGEESVQR 75 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,644,943 Number of Sequences: 5004 Number of extensions: 50967 Number of successful extensions: 135 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 134 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 135 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 321951680 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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