BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov11f11 (692 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 08_01_0835 + 8147177-8147359,8147871-8147968,8148045-8148102,814... 186 2e-47 04_04_1075 + 30634141-30634320,30634917-30635014,30635113-306351... 180 7e-46 08_02_1442 + 27120604-27120890,27121029-27121166,27121280-271213... 100 1e-21 10_06_0101 + 10736987-10737100,10737263-10737301,10737397-107374... 30 2.0 12_02_0398 - 18586985-18587480,18587669-18587687,18588317-185885... 28 6.1 01_06_0457 - 29524544-29525962,29526518-29526606,29526841-295268... 28 8.1 >08_01_0835 + 8147177-8147359,8147871-8147968,8148045-8148102, 8148192-8148271,8148770-8148872,8148966-8149181 Length = 245 Score = 186 bits (452), Expect = 2e-47 Identities = 87/160 (54%), Positives = 116/160 (72%) Frame = +3 Query: 171 KLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRIKERDEI 350 K VPESVLK + L + A++ ++ IF RA+QY +EY +E++ + Sbjct: 7 KAAVVPESVLKKRKREEQWAADRKEKALAEKKKAVESRKLIFARAKQYAQEYDAQEKELV 66 Query: 351 RLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVRLNKAT 530 +L R+AR +G +YV EAKL FV+RIRGIN + PK RK+LQL RLRQI NGVF+++NKAT Sbjct: 67 QLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTRKILQLLRLRQIFNGVFLKVNKAT 126 Query: 531 VNMLRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGQRIPI 650 +NMLR EPY+A+GYPNLKSVREL+YKRG+ KL+ QRIP+ Sbjct: 127 INMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPL 166 >04_04_1075 + 30634141-30634320,30634917-30635014,30635113-30635170, 30635259-30635338,30635686-30635788,30635847-30636080 Length = 250 Score = 180 bits (439), Expect = 7e-46 Identities = 83/156 (53%), Positives = 114/156 (73%) Frame = +3 Query: 183 VPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRIKERDEIRLAR 362 VPESVL+ + + + +I+ ++ IF RA+QY +EY +E++ ++L R Sbjct: 10 VPESVLRKRKREEVWAAASKEKAVAEKKKSIESRKLIFSRAKQYAEEYEAQEKELVQLKR 69 Query: 363 QARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNML 542 +AR +G +YV E KL FV+RIRGIN + PK RK+LQL RLRQI NGVF+++NKAT+NML Sbjct: 70 EARMKGGFYVSPEEKLLFVVRIRGINAMHPKTRKILQLLRLRQIFNGVFLKVNKATINML 129 Query: 543 RIAEPYIAWGYPNLKSVRELVYKRGFAKLSGQRIPI 650 R EPY+A+GYPNLKSVREL+YKRG+ KL+ QRIP+ Sbjct: 130 RRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPL 165 >08_02_1442 + 27120604-27120890,27121029-27121166,27121280-27121382, 27121877-27122036,27122927-27123114,27123203-27124770, 27124882-27125869,27126595-27127098,27127347-27127433, 27127753-27127821,27128012-27128041 Length = 1373 Score = 100 bits (239), Expect = 1e-21 Identities = 56/168 (33%), Positives = 92/168 (54%), Gaps = 3/168 (1%) Frame = +3 Query: 156 KEDSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRIK 335 +E +++LP V E+VLK + +R + KR E +V+E+R K Sbjct: 3 EEGTQQLPYVRETVLKKRKVNEDWAVKNRERKAAKRQRRRDDGKGAIKRPEDFVREFRNK 62 Query: 336 ERDEIRLARQARNRGNYYVPGE---AKLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGV 506 E D +R+ + + R P E +KL F IRI G + P +R++L+ RL Q+ GV Sbjct: 63 ELDFVRMKTRLKVRK--LPPAETLNSKLVFAIRIPGTMDLHPHMRRILRKLRLTQVLTGV 120 Query: 507 FVRLNKATVNMLRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGQRIPI 650 F++ AT+ L + EP+I +G+PNLK+V++L+YK+G L + P+ Sbjct: 121 FLKATDATMKRLLVVEPFITYGFPNLKNVKDLIYKKGRGFLDKEPFPL 168 >10_06_0101 + 10736987-10737100,10737263-10737301,10737397-10737474, 10737539-10737685,10737781-10737888,10738115-10738449, 10738572-10739544,10739702-10739980 Length = 690 Score = 29.9 bits (64), Expect = 2.0 Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%) Frame = +3 Query: 249 TLKRRSSAIKKKREIF--KRAEQYVKE-YRIKERDEIRLARQARNRGNYY 389 TL+ R+ IK KRE+F KR E ++E ++ + E+ + A NR + Sbjct: 149 TLETRTDPIKLKREVFRRKRKEHRIQELLQVDKEAELHMRNVATNRSRNF 198 >12_02_0398 - 18586985-18587480,18587669-18587687,18588317-18588544, 18589699-18589966 Length = 336 Score = 28.3 bits (60), Expect = 6.1 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +1 Query: 394 PGKPNWHLSSESVVSTKFHRRSVKFCNCLDCAK 492 PG+ NW S +V TK R+S + N +D A+ Sbjct: 100 PGQANWFPDSNLLVDTKGRRQSRRIKNLMDEAE 132 >01_06_0457 - 29524544-29525962,29526518-29526606,29526841-29526892, 29527573-29527677,29528181-29528208,29528279-29528343, 29528808-29528880,29528932-29529113 Length = 670 Score = 27.9 bits (59), Expect = 8.1 Identities = 10/26 (38%), Positives = 16/26 (61%) Frame = +2 Query: 557 LHCLGIPQLKECP*VSIQTWIRQAEW 634 LHC G+PQ+K +W+R +E+ Sbjct: 109 LHCSGLPQIKLLSRFRRSSWVRTSEY 134 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,038,497 Number of Sequences: 37544 Number of extensions: 327689 Number of successful extensions: 761 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 750 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 761 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1768474200 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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