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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11f10
         (738 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0369 - 9505330-9505652,9507262-9507532,9507649-9507690,950...    89   3e-18
01_01_1054 + 8330081-8330137,8330229-8330321,8330445-8330504,833...    38   0.008
06_01_0784 - 5868545-5868888,5868990-5869085,5870313-5870394,587...    37   0.015
08_02_1617 - 28265252-28265354,28266546-28266608,28266943-28267151     33   0.31 
06_01_0187 + 1458802-1458895,1459004-1459464,1459551-1459648,146...    31   1.3  
04_04_0198 + 23502657-23502900,23505228-23505298,23505690-235057...    31   1.3  
09_06_0194 - 21469815-21470117,21470226-21470376,21470463-214707...    30   2.2  
03_02_1035 - 13557425-13557721,13557855-13558058,13558143-135583...    30   2.2  
10_05_0043 + 8503979-8504407,8506484-8506624,8506865-8506975,850...    29   2.9  
06_01_0173 - 1364219-1364836,1364941-1365123,1365215-1365470,136...    29   2.9  
09_02_0448 - 9458463-9459752                                           29   3.9  
07_03_1605 - 28093235-28094031,28094887-28094974                       29   3.9  
03_03_0262 + 15968884-15969687                                         29   3.9  
12_02_0522 - 19960092-19960595,19962737-19962880,19963042-199631...    29   5.1  
03_05_0361 - 23448459-23448910,23448990-23449406,23449542-234497...    28   6.7  
08_02_0189 + 13984892-13984943,13985929-13986480,13986577-139867...    28   8.9  

>02_02_0369 -
           9505330-9505652,9507262-9507532,9507649-9507690,
           9508416-9508458,9508853-9508860
          Length = 228

 Score = 89.4 bits (212), Expect = 3e-18
 Identities = 37/51 (72%), Positives = 42/51 (82%)
 Frame = +1

Query: 46  MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQHLID 198
           MP+YYCDYCDTYLTHDSPSVRK H  G KHK NV+ YYQ++ E+Q Q LID
Sbjct: 1   MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLID 51


>01_01_1054 +
           8330081-8330137,8330229-8330321,8330445-8330504,
           8330703-8330975,8331107-8331181,8331269-8331325,
           8331409-8331549,8331656-8331706,8331795-8331944,
           8331974-8332057,8332171-8332273,8332451-8332527,
           8333469-8333704,8334000-8334078,8335123-8335218,
           8335735-8335828,8336325-8336423,8336663-8337453
          Length = 871

 Score = 37.9 bits (84), Expect = 0.008
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +1

Query: 40  LKMPKYYCDYCDTYLTHDSPSVRKTHCTGRKH 135
           + + KYYCDYC+     D+P+ RK H  G +H
Sbjct: 449 MPLGKYYCDYCEKQF-QDTPAARKRHLDGAQH 479


>06_01_0784 -
           5868545-5868888,5868990-5869085,5870313-5870394,
           5870639-5870839,5871810-5871818
          Length = 243

 Score = 37.1 bits (82), Expect = 0.015
 Identities = 14/30 (46%), Positives = 22/30 (73%)
 Frame = +1

Query: 58  YCDYCDTYLTHDSPSVRKTHCTGRKHKDNV 147
           +CD+C  Y+ ++  S+R TH  G++HKDNV
Sbjct: 12  WCDFCKIYIANNPLSIR-THEIGKRHKDNV 40


>08_02_1617 - 28265252-28265354,28266546-28266608,28266943-28267151
          Length = 124

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +1

Query: 46  MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVK 150
           M ++YC +CD Y    S SV++ H   ++HK  +K
Sbjct: 61  MGQFYCLHCDRYFA--SESVKEEHYRSKRHKKRIK 93


>06_01_0187 +
           1458802-1458895,1459004-1459464,1459551-1459648,
           1460918-1461487,1461534-1461822,1461904-1462086,
           1462204-1462824
          Length = 771

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -1

Query: 291 YRRIPRWWYCSAFVAKWILSNFAC 220
           Y+++P WW+ S  +A   ++ F C
Sbjct: 444 YKQVPEWWFISILIASVAITMFTC 467


>04_04_0198 +
           23502657-23502900,23505228-23505298,23505690-23505727,
           23505905-23507693
          Length = 713

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +1

Query: 193 IDATTAAFKAGKIAQNPFGNKGTAIPPPWDP 285
           +DAT  A   G IA  P G +G   PPP  P
Sbjct: 524 VDATVVAAAGGGIAIGPLGEEGLVGPPPPPP 554


>09_06_0194 -
           21469815-21470117,21470226-21470376,21470463-21470700,
           21470784-21470991,21471107-21471309,21471407-21471508,
           21471622-21472945
          Length = 842

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 15/60 (25%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
 Frame = +3

Query: 210 GIQSRQNCSKSIWQQRHCNTTTLGSFGNGTRRTPTSCTRWSSR-YDTSSIYGSWRSYGTT 386
           G  +   C+ +  +   C           TRR PT C  W     D   +  SW   G T
Sbjct: 374 GNMNAGECAAACRRNCSCVAYAYADLSRSTRRDPTRCLMWGGELLDMEKVNESWGDLGET 433


>03_02_1035 -
           13557425-13557721,13557855-13558058,13558143-13558332,
           13558450-13558841,13558931-13559023,13559297-13559500,
           13559572-13559635,13559760-13559806,13559825-13559971,
           13560243-13560335,13560420-13560599,13560993-13561128,
           13561216-13561466,13561556-13561669,13561794-13561991,
           13562050-13562110,13562921-13563210
          Length = 986

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 2/73 (2%)
 Frame = +1

Query: 22  LGC*CFLKMPKYYCDYCDTYLTHDSPSVRKTH--CTGRKHKDNVKFYYQKWMEEQAQHLI 195
           +GC    K+ +Y CD     L  D P VRKT   C  + +  N +    +   E  + LI
Sbjct: 200 MGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLEALKDLI 259

Query: 196 DATTAAFKAGKIA 234
                   A  +A
Sbjct: 260 SDNNPMVVANAVA 272


>10_05_0043 +
           8503979-8504407,8506484-8506624,8506865-8506975,
           8507746-8508330
          Length = 421

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +1

Query: 61  CDYCDTYLTHDSPSVRKTHCTGRKHKDNVK 150
           C+ C   +  D+P V + H TG+KHK N++
Sbjct: 280 CEVCK--IQCDTPEVLRIHKTGKKHKKNLE 307


>06_01_0173 -
           1364219-1364836,1364941-1365123,1365215-1365470,
           1365551-1366120,1367066-1367178,1367344-1367816,
           1367906-1367984
          Length = 763

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -1

Query: 291 YRRIPRWWYCSAFVAKWILSNFAC 220
           Y+++P WW+    +A   ++ FAC
Sbjct: 437 YKQVPEWWFVCILIANIAVTIFAC 460


>09_02_0448 - 9458463-9459752
          Length = 429

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = -3

Query: 184 VLVPPSISDNKTSHCLYVFF 125
           V++PP I D K SHCL VFF
Sbjct: 146 VVIPP-IPDKKYSHCLAVFF 164


>07_03_1605 - 28093235-28094031,28094887-28094974
          Length = 294

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
 Frame = +3

Query: 288 GNGTRRT---PTSCTR-WSSRYDTSSIYGSWRSYGTTNDDGSTWANAANDGNETAYDGP 452
           GNGTR T   P+SCT+ WS +   +++ G     GTT    S    + N  +E+  D P
Sbjct: 87  GNGTRHTVFGPSSCTQSWSHQAAAAAMGGK----GTTGSRSSISLCSDNYDSESEVDDP 141


>03_03_0262 + 15968884-15969687
          Length = 267

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -1

Query: 252 VAKWILSNFACFECRCCCIDEML 184
           V  W+ SN  C  CRC  IDE L
Sbjct: 119 VDMWLRSNSTCPLCRCAVIDEAL 141


>12_02_0522 -
           19960092-19960595,19962737-19962880,19963042-19963131,
           19963215-19963320,19963400-19963574,19963849-19963951,
           19964382-19964636,19964726-19964803,19964908-19965000,
           19965091-19965222,19965898-19966002,19966127-19966201,
           19966284-19966340,19966419-19966532,19966613-19966756,
           19966886-19966969,19967071-19967164,19967244-19967369,
           19967507-19967580,19967672-19967875,19968234-19968388,
           19968860-19968947,19969505-19969730,19970235-19970286,
           19970766-19970958,19973221-19973314,19973744-19973788,
           19974874-19974896
          Length = 1210

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 16/53 (30%), Positives = 23/53 (43%)
 Frame = +3

Query: 168 DGGTSTTSHRCNNSGIQSRQNCSKSIWQQRHCNTTTLGSFGNGTRRTPTSCTR 326
           + G     HR  +  I+     S S W +RHCN T L ++  G       C+R
Sbjct: 175 EAGALVPIHRLKSLRIRRSTPPSSSSWWRRHCNRTPL-TWPLGVYIVSVQCSR 226


>03_05_0361 -
           23448459-23448910,23448990-23449406,23449542-23449735,
           23449854-23449902,23450155-23450539,23450578-23450874,
           23451650-23451961
          Length = 701

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
 Frame = +3

Query: 279 GSFGNGTRRTPTSCTRWSSRYDTSSIYGS------WRSYGTTNDDGSTWANAANDGNETA 440
           G  G G    P +C+   +R+  S++  S      W  +  T  DGS+W++   +G  T+
Sbjct: 310 GQQGYGGGVPPPTCSGGHTRFGASALLISNACSLNWYLWNHTMSDGSSWSSDGTEGQYTS 369


>08_02_0189 +
           13984892-13984943,13985929-13986480,13986577-13986759,
           13986826-13987006,13987238-13987654,13987742-13988128,
           13988176-13988467
          Length = 687

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
 Frame = +1

Query: 100 SVRKTHCTGRKHKDNVKFYYQKWMEE----QAQHL 192
           S    HC    H  N K+YY+ W+EE    QA H+
Sbjct: 448 STTPLHCLA--HSLNPKYYYETWLEEAPNRQAPHM 480


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,630,705
Number of Sequences: 37544
Number of extensions: 315333
Number of successful extensions: 966
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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