Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11f10
(738 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0369 - 9505330-9505652,9507262-9507532,9507649-9507690,950... 89 3e-18
01_01_1054 + 8330081-8330137,8330229-8330321,8330445-8330504,833... 38 0.008
06_01_0784 - 5868545-5868888,5868990-5869085,5870313-5870394,587... 37 0.015
08_02_1617 - 28265252-28265354,28266546-28266608,28266943-28267151 33 0.31
06_01_0187 + 1458802-1458895,1459004-1459464,1459551-1459648,146... 31 1.3
04_04_0198 + 23502657-23502900,23505228-23505298,23505690-235057... 31 1.3
09_06_0194 - 21469815-21470117,21470226-21470376,21470463-214707... 30 2.2
03_02_1035 - 13557425-13557721,13557855-13558058,13558143-135583... 30 2.2
10_05_0043 + 8503979-8504407,8506484-8506624,8506865-8506975,850... 29 2.9
06_01_0173 - 1364219-1364836,1364941-1365123,1365215-1365470,136... 29 2.9
09_02_0448 - 9458463-9459752 29 3.9
07_03_1605 - 28093235-28094031,28094887-28094974 29 3.9
03_03_0262 + 15968884-15969687 29 3.9
12_02_0522 - 19960092-19960595,19962737-19962880,19963042-199631... 29 5.1
03_05_0361 - 23448459-23448910,23448990-23449406,23449542-234497... 28 6.7
08_02_0189 + 13984892-13984943,13985929-13986480,13986577-139867... 28 8.9
>02_02_0369 -
9505330-9505652,9507262-9507532,9507649-9507690,
9508416-9508458,9508853-9508860
Length = 228
Score = 89.4 bits (212), Expect = 3e-18
Identities = 37/51 (72%), Positives = 42/51 (82%)
Frame = +1
Query: 46 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQHLID 198
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q LID
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLID 51
>01_01_1054 +
8330081-8330137,8330229-8330321,8330445-8330504,
8330703-8330975,8331107-8331181,8331269-8331325,
8331409-8331549,8331656-8331706,8331795-8331944,
8331974-8332057,8332171-8332273,8332451-8332527,
8333469-8333704,8334000-8334078,8335123-8335218,
8335735-8335828,8336325-8336423,8336663-8337453
Length = 871
Score = 37.9 bits (84), Expect = 0.008
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 40 LKMPKYYCDYCDTYLTHDSPSVRKTHCTGRKH 135
+ + KYYCDYC+ D+P+ RK H G +H
Sbjct: 449 MPLGKYYCDYCEKQF-QDTPAARKRHLDGAQH 479
>06_01_0784 -
5868545-5868888,5868990-5869085,5870313-5870394,
5870639-5870839,5871810-5871818
Length = 243
Score = 37.1 bits (82), Expect = 0.015
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +1
Query: 58 YCDYCDTYLTHDSPSVRKTHCTGRKHKDNV 147
+CD+C Y+ ++ S+R TH G++HKDNV
Sbjct: 12 WCDFCKIYIANNPLSIR-THEIGKRHKDNV 40
>08_02_1617 - 28265252-28265354,28266546-28266608,28266943-28267151
Length = 124
Score = 32.7 bits (71), Expect = 0.31
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 46 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVK 150
M ++YC +CD Y S SV++ H ++HK +K
Sbjct: 61 MGQFYCLHCDRYFA--SESVKEEHYRSKRHKKRIK 93
>06_01_0187 +
1458802-1458895,1459004-1459464,1459551-1459648,
1460918-1461487,1461534-1461822,1461904-1462086,
1462204-1462824
Length = 771
Score = 30.7 bits (66), Expect = 1.3
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = -1
Query: 291 YRRIPRWWYCSAFVAKWILSNFAC 220
Y+++P WW+ S +A ++ F C
Sbjct: 444 YKQVPEWWFISILIASVAITMFTC 467
>04_04_0198 +
23502657-23502900,23505228-23505298,23505690-23505727,
23505905-23507693
Length = 713
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 193 IDATTAAFKAGKIAQNPFGNKGTAIPPPWDP 285
+DAT A G IA P G +G PPP P
Sbjct: 524 VDATVVAAAGGGIAIGPLGEEGLVGPPPPPP 554
>09_06_0194 -
21469815-21470117,21470226-21470376,21470463-21470700,
21470784-21470991,21471107-21471309,21471407-21471508,
21471622-21472945
Length = 842
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/60 (25%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
Frame = +3
Query: 210 GIQSRQNCSKSIWQQRHCNTTTLGSFGNGTRRTPTSCTRWSSR-YDTSSIYGSWRSYGTT 386
G + C+ + + C TRR PT C W D + SW G T
Sbjct: 374 GNMNAGECAAACRRNCSCVAYAYADLSRSTRRDPTRCLMWGGELLDMEKVNESWGDLGET 433
>03_02_1035 -
13557425-13557721,13557855-13558058,13558143-13558332,
13558450-13558841,13558931-13559023,13559297-13559500,
13559572-13559635,13559760-13559806,13559825-13559971,
13560243-13560335,13560420-13560599,13560993-13561128,
13561216-13561466,13561556-13561669,13561794-13561991,
13562050-13562110,13562921-13563210
Length = 986
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 2/73 (2%)
Frame = +1
Query: 22 LGC*CFLKMPKYYCDYCDTYLTHDSPSVRKTH--CTGRKHKDNVKFYYQKWMEEQAQHLI 195
+GC K+ +Y CD L D P VRKT C + + N + + E + LI
Sbjct: 200 MGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLEALKDLI 259
Query: 196 DATTAAFKAGKIA 234
A +A
Sbjct: 260 SDNNPMVVANAVA 272
>10_05_0043 +
8503979-8504407,8506484-8506624,8506865-8506975,
8507746-8508330
Length = 421
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 61 CDYCDTYLTHDSPSVRKTHCTGRKHKDNVK 150
C+ C + D+P V + H TG+KHK N++
Sbjct: 280 CEVCK--IQCDTPEVLRIHKTGKKHKKNLE 307
>06_01_0173 -
1364219-1364836,1364941-1365123,1365215-1365470,
1365551-1366120,1367066-1367178,1367344-1367816,
1367906-1367984
Length = 763
Score = 29.5 bits (63), Expect = 2.9
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = -1
Query: 291 YRRIPRWWYCSAFVAKWILSNFAC 220
Y+++P WW+ +A ++ FAC
Sbjct: 437 YKQVPEWWFVCILIANIAVTIFAC 460
>09_02_0448 - 9458463-9459752
Length = 429
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 184 VLVPPSISDNKTSHCLYVFF 125
V++PP I D K SHCL VFF
Sbjct: 146 VVIPP-IPDKKYSHCLAVFF 164
>07_03_1605 - 28093235-28094031,28094887-28094974
Length = 294
Score = 29.1 bits (62), Expect = 3.9
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +3
Query: 288 GNGTRRT---PTSCTR-WSSRYDTSSIYGSWRSYGTTNDDGSTWANAANDGNETAYDGP 452
GNGTR T P+SCT+ WS + +++ G GTT S + N +E+ D P
Sbjct: 87 GNGTRHTVFGPSSCTQSWSHQAAAAAMGGK----GTTGSRSSISLCSDNYDSESEVDDP 141
>03_03_0262 + 15968884-15969687
Length = 267
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -1
Query: 252 VAKWILSNFACFECRCCCIDEML 184
V W+ SN C CRC IDE L
Sbjct: 119 VDMWLRSNSTCPLCRCAVIDEAL 141
>12_02_0522 -
19960092-19960595,19962737-19962880,19963042-19963131,
19963215-19963320,19963400-19963574,19963849-19963951,
19964382-19964636,19964726-19964803,19964908-19965000,
19965091-19965222,19965898-19966002,19966127-19966201,
19966284-19966340,19966419-19966532,19966613-19966756,
19966886-19966969,19967071-19967164,19967244-19967369,
19967507-19967580,19967672-19967875,19968234-19968388,
19968860-19968947,19969505-19969730,19970235-19970286,
19970766-19970958,19973221-19973314,19973744-19973788,
19974874-19974896
Length = 1210
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +3
Query: 168 DGGTSTTSHRCNNSGIQSRQNCSKSIWQQRHCNTTTLGSFGNGTRRTPTSCTR 326
+ G HR + I+ S S W +RHCN T L ++ G C+R
Sbjct: 175 EAGALVPIHRLKSLRIRRSTPPSSSSWWRRHCNRTPL-TWPLGVYIVSVQCSR 226
>03_05_0361 -
23448459-23448910,23448990-23449406,23449542-23449735,
23449854-23449902,23450155-23450539,23450578-23450874,
23451650-23451961
Length = 701
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Frame = +3
Query: 279 GSFGNGTRRTPTSCTRWSSRYDTSSIYGS------WRSYGTTNDDGSTWANAANDGNETA 440
G G G P +C+ +R+ S++ S W + T DGS+W++ +G T+
Sbjct: 310 GQQGYGGGVPPPTCSGGHTRFGASALLISNACSLNWYLWNHTMSDGSSWSSDGTEGQYTS 369
>08_02_0189 +
13984892-13984943,13985929-13986480,13986577-13986759,
13986826-13987006,13987238-13987654,13987742-13988128,
13988176-13988467
Length = 687
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Frame = +1
Query: 100 SVRKTHCTGRKHKDNVKFYYQKWMEE----QAQHL 192
S HC H N K+YY+ W+EE QA H+
Sbjct: 448 STTPLHCLA--HSLNPKYYYETWLEEAPNRQAPHM 480
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,630,705
Number of Sequences: 37544
Number of extensions: 315333
Number of successful extensions: 966
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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