Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11f09
         (665 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   6.5  
AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F rec...    23   6.5  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   8.7  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -2

Query: 196  PRYVPRPMAGMSLPLFIFNEGTSIVDASSV 107
            PRY+    AG  L +F F+   +I   ++V
Sbjct: 1137 PRYIQSQPAGKQLSMFFFHTKETIQQPANV 1166


>AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F
           receptor protein.
          Length = 425

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +3

Query: 441 SLKKLGLDYIDLYLMHWPIGLNADY 515
           +L  LG++Y+   +  WPI     Y
Sbjct: 188 NLPSLGIEYVSYCIEDWPIAYGRVY 212


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +3

Query: 3   FIALCIWRQSQFARASRQYKSTICSLV 83
           F+A+C W + ++   +  + S I SLV
Sbjct: 616 FMAICYWMKQKYQLIAAFFISAIYSLV 642


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,612
Number of Sequences: 2352
Number of extensions: 13687
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)