Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11f06
         (512 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    24   0.91 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   1.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   1.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   1.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   1.2  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    22   3.7  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   6.4  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   8.5  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   8.5  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   8.5  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.8 bits (49), Expect = 0.91
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 281 YEGPVGVAGNLPFLGTAAVEETFKSIGVGH 370
           +EG    +G    L TAAV  +F++I  G+
Sbjct: 662 FEGEAKTSGQPRLLLTAAVPASFEAIAAGY 691


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +1

Query: 349 QVHWCWPYIVSMWGRGRGYKS*KSRLCYY 435
           +V W W  I + W    G     SR+C++
Sbjct: 128 RVAWMWCLIFAFWVPQLGSLFRSSRMCFF 156


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +1

Query: 349 QVHWCWPYIVSMWGRGRGYKS*KSRLCYY 435
           +V W W  I + W    G     SR+C++
Sbjct: 128 RVAWMWCLIFAFWVPQLGSLFRSSRMCFF 156


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +1

Query: 349 QVHWCWPYIVSMWGRGRGYKS*KSRLCYY 435
           +V W W  I + W    G     SR+C++
Sbjct: 128 RVAWMWCLIFAFWVPQLGSLFRSSRMCFF 156


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +1

Query: 349 QVHWCWPYIVSMWGRGRGYKS*KSRLCYY 435
           +V W W  I + W    G     SR+C++
Sbjct: 128 RVAWMWCLIFAFWVPQLGSLFRSSRMCFF 156


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 424 LCYYTKPCACSPGSGQW 474
           +CYY    A  PG+GQ+
Sbjct: 26  ICYYASWGAQRPGNGQF 42


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -2

Query: 451 RHRAWCNSRDGTFSS 407
           +HR+WC+S     S+
Sbjct: 231 QHRSWCSSSQPVLST 245


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 439 KPCACSPGSGQWATR 483
           K   CSPGSG   +R
Sbjct: 146 KSSVCSPGSGHQDSR 160


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 439 KPCACSPGSGQWATR 483
           K   CSPGSG   +R
Sbjct: 146 KSSVCSPGSGHQDSR 160


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 439 KPCACSPGSGQWATR 483
           K   CSPGSG   +R
Sbjct: 146 KSSVCSPGSGHQDSR 160


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,791
Number of Sequences: 336
Number of extensions: 2681
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12258909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)