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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11f06
         (512 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0218 + 1856104-1856700,1856814-1857452                           31   0.41 
06_01_0366 - 2632115-2632180,2632359-2632470,2632736-2634168           31   0.72 
12_01_0101 - 779047-779298,779459-779711,779857-780005,780033-78...    29   2.2  
04_01_0154 - 1775693-1775942,1776834-1777588                           28   3.8  
11_06_0365 - 22742886-22744223                                         28   5.1  
11_06_0362 - 22723104-22724441                                         28   5.1  
06_02_0064 + 11062798-11063568,11064212-11064261,11064354-110645...    28   5.1  
06_01_0474 - 3362734-3362827,3363179-3363366,3363458-3363700,336...    28   5.1  
05_01_0460 - 3644229-3644420,3644623-3644865,3644959-3645237,364...    28   5.1  
07_03_1004 + 23244479-23244648,23245104-23245276,23245535-232456...    27   6.7  
05_05_0017 + 21546434-21546841                                         27   6.7  
01_05_0791 + 25267885-25267930,25268258-25268713,25268802-252688...    27   6.7  
08_02_0572 - 18842539-18842950,18843242-18843613,18844947-18845671     27   8.8  
03_02_0477 - 8770905-8770985,8771164-8771361,8771939-8772025,877...    27   8.8  
01_01_1143 - 9064210-9065682                                           27   8.8  
01_01_0219 + 1863478-1864041,1864459-1865109                           27   8.8  

>01_01_0218 + 1856104-1856700,1856814-1857452
          Length = 411

 Score = 31.5 bits (68), Expect = 0.41
 Identities = 17/63 (26%), Positives = 25/63 (39%)
 Frame = -3

Query: 477 SPLTTPRTAGTGLGVIAETGLSALIATTPSPH*DDIWPTPMDLKVSSTAAVPRKGRLPAT 298
           SPL +P          + T +    A +PSP    +WP         +A++P     PA 
Sbjct: 41  SPLLSPMLLSVSSLAPSSTPMPTPTAPSPSPETPCVWPPSPPSPTDPSASMPSPTERPAA 100

Query: 297 PTG 289
           P G
Sbjct: 101 PMG 103


>06_01_0366 - 2632115-2632180,2632359-2632470,2632736-2634168
          Length = 536

 Score = 30.7 bits (66), Expect = 0.72
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +2

Query: 371 ISSQCGDGVVAIRAESPVSAITPSPVPAVRGVVNGLLGQ 487
           +SS  G+ V     ESPV AIT SP+  V  +    +G+
Sbjct: 302 VSSYLGNVVTYASRESPVEAITSSPLADVAAMAGAAIGE 340


>12_01_0101 -
           779047-779298,779459-779711,779857-780005,780033-780281,
           780377-780571,780681-780788,780935-781156,781669-781986,
           781988-782615,783059-783135,783161-783267,783491-783619,
           783763-783820,783902-783984,784458-784539,784617-784693,
           784827-784910,784999-785068,785146-785234,785319-786008,
           786485-786797
          Length = 1410

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
 Frame = +1

Query: 298 CGRQSTFPWNCCRRRNLQVHWCW----PYIVSMWGRGRGYKS*KSR 423
           C R  +F W   +++N   H CW    P+    W R R + S + R
Sbjct: 615 CARVQSFAWFLRKKKNQAFHTCWWKRMPFTSINWLRDRLFTSIRRR 660


>04_01_0154 - 1775693-1775942,1776834-1777588
          Length = 334

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 40  RSSRGRTSNIRSQSMLGSWLVRGPGRRRTGFQ 135
           R +RG     R  +   SWL+ G GRRR+G +
Sbjct: 180 RGARGSWRRRRLATGASSWLLGGRGRRRSGLR 211


>11_06_0365 - 22742886-22744223
          Length = 445

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = +1

Query: 67  IRSQSMLGSWLVRGPGRRRTGFQLLVQPLR*PCLSRPCNEFS 192
           IRS ++  SW       RR  F L     + PCL   C  +S
Sbjct: 27  IRSSAVCASWCAASTAVRRARFPLPSSAKQLPCLFYACEAYS 68


>11_06_0362 - 22723104-22724441
          Length = 445

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = +1

Query: 67  IRSQSMLGSWLVRGPGRRRTGFQLLVQPLR*PCLSRPCNEFS 192
           IRS ++  SW       RR  F L     + PCL   C  +S
Sbjct: 27  IRSSAVCASWCAASTAVRRARFPLPSSAKQLPCLFYACEAYS 68


>06_02_0064 +
           11062798-11063568,11064212-11064261,11064354-11064510,
           11064598-11064816,11065301-11065429,11066502-11068031,
           11068654-11069013,11069086-11069205,11069727-11069897,
           11070022-11070180,11070327-11070452,11070660-11070968
          Length = 1366

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = -3

Query: 417 LSALIATTPSPH*DDIWPTPMDLKVSSTAAVPRKGRLPATPTGP 286
           L  L+  T   H +     PM  + S+ AAV     LPA P+ P
Sbjct: 119 LMQLLGNTAPTHLESAVSMPMPSEFSAAAAVAPPAPLPAMPSAP 162


>06_01_0474 - 3362734-3362827,3363179-3363366,3363458-3363700,
            3363820-3364098,3364189-3364386,3364475-3365110,
            3365209-3365463,3365579-3365685,3365770-3369566,
            3369677-3370166,3370918-3371308,3371481-3371573,
            3371687-3371810,3372544-3372791
          Length = 2380

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 18/76 (23%), Positives = 36/76 (47%)
 Frame = -1

Query: 389  PHIETIYGQHQWT*RFLRRQQFQGKVDCRPHQQDLRKCFGMTRQCR*EHMGSRWSLRNFL 210
            P I T++ + + T  +   + ++ + D + +Q   +  F  T Q    H G  W+L N+ 
Sbjct: 1432 PRINTLFQKDRHTLAY--DKGWRVRTDFKQYQVLKQNPFWWTHQ---RHDGKLWNLNNYR 1486

Query: 209  H*TLPELNSLQGLLRH 162
               +  L  ++G+L H
Sbjct: 1487 TDVIQALGGVEGILEH 1502


>05_01_0460 - 3644229-3644420,3644623-3644865,3644959-3645237,
            3645328-3645525,3645614-3646249,3646352-3646606,
            3646718-3646824,3646909-3650705,3650816-3651305,
            3652043-3652433,3652621-3652713,3652818-3652941,
            3653871-3654118
          Length = 2350

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 18/76 (23%), Positives = 36/76 (47%)
 Frame = -1

Query: 389  PHIETIYGQHQWT*RFLRRQQFQGKVDCRPHQQDLRKCFGMTRQCR*EHMGSRWSLRNFL 210
            P I T++ + + T  +   + ++ + D + +Q   +  F  T Q    H G  W+L N+ 
Sbjct: 1432 PRINTLFQKDRHTLAY--DKGWRVRTDFKQYQVLKQNPFWWTHQ---RHDGKLWNLNNYR 1486

Query: 209  H*TLPELNSLQGLLRH 162
               +  L  ++G+L H
Sbjct: 1487 TDVIQALGGVEGILEH 1502


>07_03_1004 +
           23244479-23244648,23245104-23245276,23245535-23245638,
           23245849-23246037,23246508-23248076
          Length = 734

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = +1

Query: 259 CLVIPKHLRRSCWCGRQSTFPWNCCRRRNLQVH 357
           CLV P   RR C   R+S F    CRR   Q+H
Sbjct: 120 CLVFPWPARRRCPSRRRSLFRLR-CRRGRRQLH 151


>05_05_0017 + 21546434-21546841
          Length = 135

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 29/79 (36%), Positives = 34/79 (43%), Gaps = 6/79 (7%)
 Frame = -3

Query: 507 AQPHS-VPWPS-SPLTTPRTAGTGLGVIAETGLSALIATTPSPH*DDIW---PTP-MDLK 346
           A P S  P PS +PL+TP     G  V A +   A   TTP+P         P+P  D K
Sbjct: 47  ASPASDAPAPSPAPLSTPELCRPGEPVPAPSSSPAGATTTPAPAAPAATAPAPSPEADGK 106

Query: 345 VSSTAAVPRKGRLPATPTG 289
            S  AA P     PA   G
Sbjct: 107 SSGAAAAPPLMTWPAVLAG 125


>01_05_0791 +
           25267885-25267930,25268258-25268713,25268802-25268832,
           25268949-25269255
          Length = 279

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 18/58 (31%), Positives = 25/58 (43%)
 Frame = +2

Query: 275 NIYEGPVGVAGNLPFLGTAAVEETFKSIGVGHISSQCGDGVVAIRAESPVSAITPSPV 448
           N Y     VA +  F GTA +  T  S G    S+  G G   +   SP +   P+P+
Sbjct: 142 NSYYQKNPVATSCDFGGTATITNTDPSSGSCQYSASSGGGQNMLPPPSPTTLPPPTPM 199


>08_02_0572 - 18842539-18842950,18843242-18843613,18844947-18845671
          Length = 502

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
 Frame = +1

Query: 298 CGRQSTF-PWNCCRRRNLQVHWCW 366
           C RQ    P +CCRR   Q  WC+
Sbjct: 371 CSRQEEEGPDHCCRRLRRQEQWCY 394


>03_02_0477 -
           8770905-8770985,8771164-8771361,8771939-8772025,
           8772094-8772179,8772270-8772368,8772431-8772551,
           8773251-8773331,8773643-8773723,8773972-8774088,
           8774185-8774256,8774621-8775055
          Length = 485

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = +1

Query: 247 SYRHC--LVIPKHLRRSCWCGRQSTFPWNCCRRRNLQVHWCW 366
           +Y H   +++ K+   SC  G    F  N  R+ N  + +CW
Sbjct: 230 TYHHLKDIILEKYGSNSCNIGDDGGFAPNISRQWNYAIQYCW 271


>01_01_1143 - 9064210-9065682
          Length = 490

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 29/90 (32%), Positives = 35/90 (38%), Gaps = 4/90 (4%)
 Frame = +2

Query: 254 GIALSSQNIYEGPV----GVAGNLPFLGTAAVEETFKSIGVGHISSQCGDGVVAIRAESP 421
           G+ L  Q   +GP     G  G L   GT+   +     G  H  S  G  V      SP
Sbjct: 334 GVVLHCQKAIDGPKPNKGGGLGGLYGAGTSGGRKGAGGYGA-HSHSLPGAAVGGHVMPSP 392

Query: 422 VSAITPSPVPAVRGVVNGLLGQGTECGCAS 511
           VS++T  P  A    VN  LGQ      AS
Sbjct: 393 VSSLTSLPGVAGGPGVNPALGQALTAILAS 422


>01_01_0219 + 1863478-1864041,1864459-1865109
          Length = 404

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -3

Query: 408 LIATTPSPH*DDIWPTPMDLKVSSTAAVPRKGRLPATPTG 289
           ++  +PSP    +WP P+     + A  P     P+TPTG
Sbjct: 58  IMQPSPSPETPCVWPPPLPSSTPTPAPSP-----PSTPTG 92


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,426,727
Number of Sequences: 37544
Number of extensions: 355060
Number of successful extensions: 1190
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1190
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1106928780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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