Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11f04
(676 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26293| Best HMM Match : WD40 (HMM E-Value=1.1e-15) 53 2e-07
SB_37875| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_20681| Best HMM Match : WD40 (HMM E-Value=3.1e-16) 35 0.069
SB_57808| Best HMM Match : WD40 (HMM E-Value=2.5e-22) 34 0.12
SB_52725| Best HMM Match : WD40 (HMM E-Value=2.1e-22) 34 0.12
SB_54574| Best HMM Match : WD40 (HMM E-Value=0) 33 0.21
SB_34582| Best HMM Match : PAP2 (HMM E-Value=0.013) 32 0.49
SB_21573| Best HMM Match : WD40 (HMM E-Value=4.1e-32) 32 0.49
SB_14684| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.49
SB_48086| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_52576| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.85
SB_47540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.85
SB_22042| Best HMM Match : WD40 (HMM E-Value=6.1e-13) 31 0.85
SB_14111| Best HMM Match : WD40 (HMM E-Value=6.2e-30) 30 1.5
SB_34659| Best HMM Match : WD40 (HMM E-Value=1.1e-34) 30 1.5
SB_19094| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_55962| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_48808| Best HMM Match : DEAD (HMM E-Value=0.029) 29 2.6
SB_20382| Best HMM Match : WD40 (HMM E-Value=1.7e-23) 29 2.6
SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_3357| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_34456| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_36508| Best HMM Match : WD40 (HMM E-Value=0.006) 29 4.5
SB_11879| Best HMM Match : WD40 (HMM E-Value=5.8e-21) 29 4.5
SB_54131| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_40185| Best HMM Match : WD40 (HMM E-Value=0) 29 4.5
SB_25971| Best HMM Match : Sushi (HMM E-Value=0.54) 29 4.5
SB_22072| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_5414| Best HMM Match : WD40 (HMM E-Value=6.6e-15) 29 4.5
SB_50716| Best HMM Match : WD40 (HMM E-Value=0) 28 6.0
SB_49916| Best HMM Match : ig (HMM E-Value=8.5e-06) 28 6.0
SB_30961| Best HMM Match : I-set (HMM E-Value=0) 28 6.0
SB_29629| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_20916| Best HMM Match : zf-C3HC4 (HMM E-Value=0.013) 28 6.0
SB_5745| Best HMM Match : Extensin_2 (HMM E-Value=0.43) 28 6.0
SB_58364| Best HMM Match : WD40 (HMM E-Value=2.8026e-45) 28 6.0
SB_51303| Best HMM Match : WD40 (HMM E-Value=3.5e-40) 28 6.0
SB_46779| Best HMM Match : PP2C_C (HMM E-Value=1.7) 28 7.9
SB_41907| Best HMM Match : Reprolysin (HMM E-Value=9.2e-05) 28 7.9
SB_8765| Best HMM Match : WD40 (HMM E-Value=3.9e-15) 28 7.9
SB_37321| Best HMM Match : Pkinase (HMM E-Value=2.4e-27) 28 7.9
SB_33497| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_26293| Best HMM Match : WD40 (HMM E-Value=1.1e-15)
Length = 140
Score = 53.2 bits (122), Expect = 2e-07
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Frame = +2
Query: 278 IYKKEGNDWKQTNNLVEHDLRVMGIDWAPN----TNRIVTCSVDRNAYVWTQG-DDGKWA 442
++++ G W + L H V + WAPN T+ I +CS D +W++ ++G+
Sbjct: 20 MFRETGGQWVEEQKLEAHSDWVRDVAWAPNVGLPTSTIASCSQDCRVIIWSRNEEEGEGW 79
Query: 443 TTLVLLRINRAATCVKWSPMENKFAVGSGARLISICYFEKENNW 574
++ VL + N V WS N AV G +S+ E W
Sbjct: 80 SSKVLKKFNDVVWHVSWSVTGNILAVSGGDNKVSLWKESLEGQW 123
>SB_37875| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 544
Score = 38.3 bits (85), Expect = 0.006
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 16/161 (9%)
Frame = +2
Query: 236 RSQIAFSPNNNEVHIYK----KEGNDWKQTNNL---VEHDLRVMGIDWAPNTNRIVTCSV 394
R+ I N N + ++K K+G T V H ++ I A N I++CS
Sbjct: 160 RAFITALANGNTIRVFKVSKKKDGTGTTITGEFDFPVRHKAEIINIAVASNGKYIMSCSK 219
Query: 395 DRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMENKFAVGSG----ARLISICYFEK 562
D +W G+ TL L+IN + + + SP +F +G +L + + +
Sbjct: 220 DTTIIIWDL--KGEVLATLDTLQINNSFSAL--SPC-GRFVASAGFTPDVKLWEVKFNKS 274
Query: 563 ENNWWVSKHIKK----PIRSTVTSIDWHPNN-ILLVAGSAD 670
+ VSK ++ T+T+I WHP++ L AG +D
Sbjct: 275 DAFEQVSKCFQEDHSVSQSDTITAIAWHPSSRYLASAGGSD 315
>SB_20681| Best HMM Match : WD40 (HMM E-Value=3.1e-16)
Length = 91
Score = 34.7 bits (76), Expect = 0.069
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 326 EHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATT 448
+H + + + + R+ TCS D++ VW G+DG+W T
Sbjct: 10 DHKDLIHDVSYDFHGRRMATCSSDQSVKVWDLGEDGEWRCT 50
Score = 31.1 bits (67), Expect = 0.85
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +2
Query: 290 EGNDWKQTNNLVEHDLRVMGIDWA-PNTNRIV-TCSVDRNAYVWTQ 421
E +W+ T N H V + WA P +++ +CS DR VW +
Sbjct: 43 EDGEWRCTANWKTHSGSVWKVTWAHPEFGQVLASCSFDRTVAVWEE 88
>SB_57808| Best HMM Match : WD40 (HMM E-Value=2.5e-22)
Length = 195
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +2
Query: 485 VKWSPMENKFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTVTSIDWHPNNILLVAGS 664
+ +SP +NK+A + L+ I F + + + + + V IDWHP+ LLV+GS
Sbjct: 119 LSFSPTDNKYASCADDGLVKIWDFYR----CMEEKTLRGHGADVKCIDWHPHKSLLVSGS 174
Query: 665 AD 670
D
Sbjct: 175 KD 176
>SB_52725| Best HMM Match : WD40 (HMM E-Value=2.1e-22)
Length = 874
Score = 33.9 bits (74), Expect = 0.12
Identities = 23/98 (23%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Frame = +2
Query: 260 NNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKW 439
+ N + +Y ++ NL H+ +V + W+ + ++I++C +D Y W + +
Sbjct: 252 HGNVIQLYSS--TTFENVGNLKGHNGKVRQVIWSQDDSKIISCGMDGAVYEWNVYNYKRE 309
Query: 440 ATTLVLLRINRAATCVKWSP-MENKFAVGSGARLISIC 550
+++ + + T V SP FAVGS + IC
Sbjct: 310 GESVLK---SCSYTSVTVSPDGRTTFAVGSDRTIKEIC 344
>SB_54574| Best HMM Match : WD40 (HMM E-Value=0)
Length = 1050
Score = 33.1 bits (72), Expect = 0.21
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +2
Query: 209 ITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTC 388
+ C A++ D S+I + V I+ + + + V H V ++P+ + V+C
Sbjct: 555 VNCCAFSHDDSRIISCSADQTVKIW--DASSGEGVLCFVGHTQEVFSCSFSPDDTKAVSC 612
Query: 389 SVDRNAYVW 415
S DR VW
Sbjct: 613 SADRTVKVW 621
Score = 32.7 bits (71), Expect = 0.28
Identities = 15/72 (20%), Positives = 35/72 (48%)
Frame = +2
Query: 200 CAPITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRI 379
C + C ++ D S++ +N V ++ + +Q ++ H V ++ + +RI
Sbjct: 510 CGAVYCCKFSSDSSKVVSCGTDNHVKVWDSQSG--RQLLSISGHGDVVNCCAFSHDDSRI 567
Query: 380 VTCSVDRNAYVW 415
++CS D+ +W
Sbjct: 568 ISCSADQTVKIW 579
>SB_34582| Best HMM Match : PAP2 (HMM E-Value=0.013)
Length = 279
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -1
Query: 337 KVVFHK-VVCLLPVISFLLVYVNFIIVW*ECNLTSILVP 224
KV F + ++ LP ISFLL+Y N+ I+ L+ I+ P
Sbjct: 16 KVPFKQMIIAFLPFISFLLIYSNYRIIRESTGLSKIIKP 54
>SB_21573| Best HMM Match : WD40 (HMM E-Value=4.1e-32)
Length = 458
Score = 31.9 bits (69), Expect = 0.49
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +2
Query: 467 NRAATCVKWSPMENKFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTVTSIDWHPNN- 643
N V WS + A GS R S+ +K+ HI K +V + WHP+N
Sbjct: 33 NSKVHSVSWSCDGRRLASGSFDRTASVFVLDKDR--LTLDHIYKGHNESVDQLCWHPSNP 90
Query: 644 ILLVAGSAD 670
L V S D
Sbjct: 91 DLFVTASGD 99
>SB_14684| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -1
Query: 337 KVVFHK-VVCLLPVISFLLVYVNFIIVW*ECNLTSILVP 224
KV F + ++ LP ISFLL+Y N+ I+ L+ I+ P
Sbjct: 60 KVPFKQMIIAFLPFISFLLIYSNYRIIRESTGLSKIIKP 98
>SB_48086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 31.5 bits (68), Expect = 0.64
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Frame = +2
Query: 206 PITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQ----TNNLVEH-DLRVMGID 355
P H WN + F N +E Y+++G WK+ T +H L+V GID
Sbjct: 1094 PPPLHLWNTPPNGSMFLINRHEFRDYRRDGYTWKKRTKSTTTREDHFKLKVQGID 1148
>SB_52576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1649
Score = 31.1 bits (67), Expect = 0.85
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +2
Query: 314 NNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKW 493
N+L HD V GI + R+V+ S DR +W +A L + CV
Sbjct: 826 NSLDGHDGHVRGIAITSDGRRLVSASQDRTLRIWNL---ETFAHVSTLRGHSETVYCVCC 882
Query: 494 SPMENKFAV-GSGARLISI 547
SP ++KFA+ GS ++ I
Sbjct: 883 SP-DDKFAISGSEDTMVKI 900
>SB_47540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 622
Score = 31.1 bits (67), Expect = 0.85
Identities = 23/128 (17%), Positives = 54/128 (42%), Gaps = 6/128 (4%)
Frame = +2
Query: 302 WKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVLLRINRA-A 478
W+ + L +H V+ + W+P+ + + + SVD +W + K+ + +++ +
Sbjct: 78 WRCVHTLRQHSGDVLDLAWSPDDSFLASGSVDNTVTIW---NAQKFPEVIQIIKGHTGLV 134
Query: 479 TCVKWSPMENKFAVGSGARLISICYFEKENNWWVSKHIKKPI-----RSTVTSIDWHPNN 643
V W P+ A S + + + + +W + +P + V + W P+
Sbjct: 135 KGVTWDPVGKYLASQSDDKTLRVW---RTTDWQQETSVTEPFLECSGTTHVLRLSWSPDG 191
Query: 644 ILLVAGSA 667
+V+ A
Sbjct: 192 HYVVSAHA 199
>SB_22042| Best HMM Match : WD40 (HMM E-Value=6.1e-13)
Length = 232
Score = 31.1 bits (67), Expect = 0.85
Identities = 22/89 (24%), Positives = 34/89 (38%)
Frame = +2
Query: 230 KDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAY 409
K +A N+N++ +Y E D + H ++ +D + +IVT S D
Sbjct: 145 KTNDHLAVVTNSNQLRLYNLETLDCRMVEG---HSKMILCLDVCADGTKIVTGSKDHTVR 201
Query: 410 VWTQGDDGKWATTLVLLRINRAATCVKWS 496
VW D V A + V WS
Sbjct: 202 VWDVSDCSNPRCLAVGNGHTHAVSGVAWS 230
>SB_14111| Best HMM Match : WD40 (HMM E-Value=6.2e-30)
Length = 1093
Score = 30.3 bits (65), Expect = 1.5
Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 8/120 (6%)
Frame = +2
Query: 329 HDLRVMGIDWAP-NTNRIVTCSVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPME 505
H V +DW P TN + +CS+D + VW +G + A VKWSP
Sbjct: 203 HTSGVNRLDWNPVYTNLLASCSMDNSVRVWDTYLNGICVKSHTF--HGGAVKDVKWSP-- 258
Query: 506 NKFAVGSGARLISICYFEKENNWWVSKHIKKPI-----RSTVTSIDWHP--NNILLVAGS 664
G +L+S C ++K + + H + VT + +HP N+ L G+
Sbjct: 259 ------GGMQLLS-CGYDKSSR-LIDIHTGCQVSLFHQNDYVTCVQYHPIDRNVFLTGGA 310
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +2
Query: 329 HDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMEN 508
H V + W+P ++++C D+++ + D + L N TCV++ P++
Sbjct: 247 HGGAVKDVKWSPGGMQLLSCGYDKSSRLI----DIHTGCQVSLFHQNDYVTCVQYHPIDR 302
Query: 509 KFAVGSGAR 535
+ GAR
Sbjct: 303 NVFLTGGAR 311
>SB_34659| Best HMM Match : WD40 (HMM E-Value=1.1e-34)
Length = 292
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = +2
Query: 224 WNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRN 403
W+ D +A N+N++ ++ G+ Q + EH V I W+P+ + S N
Sbjct: 154 WSPDHQHLASGGNDNKLLVWNLSGSTPIQQYS--EHTAAVKAISWSPHQVCNLAWSKHSN 211
Query: 404 AYVWTQG 424
V T G
Sbjct: 212 ELVSTHG 218
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/78 (23%), Positives = 32/78 (41%)
Frame = +2
Query: 182 LTFGDSCAPITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWA 361
LT A + AWN D + S + + + + + + + LV H V G+ W+
Sbjct: 99 LTMDGHSARVGALAWNGD---MLSSGSRDRLILQRDTRSPTQLERRLVGHRQEVCGLKWS 155
Query: 362 PNTNRIVTCSVDRNAYVW 415
P+ + + D VW
Sbjct: 156 PDHQHLASGGNDNKLLVW 173
>SB_19094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +2
Query: 233 DRSQIAFSPNNNEVHIYKKEGNDWKQTN--NLVEHDLRVMGIDWAPNTNRIVTCSVDRNA 406
D +I +N V I+ + G+ N +L EHD V + +RI++ S DR+
Sbjct: 52 DSKRIVVGSDNGAVDIWSQSGSLLGLENLASLKEHDNVVSSVSVDCEKSRIISASWDRSI 111
Query: 407 YVW 415
VW
Sbjct: 112 KVW 114
>SB_55962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = +2
Query: 479 TCVKWSPMENKFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTVTSIDWHPNNILLVA 658
T SP +GS RL + + W SK + P T+TS+ W + LVA
Sbjct: 160 TVAACSPSGQSVVIGSFDRLRVFNWSPRRGAWDESKAKEIPNLYTITSLAWKRDGSRLVA 219
Query: 659 GS 664
G+
Sbjct: 220 GT 221
>SB_48808| Best HMM Match : DEAD (HMM E-Value=0.029)
Length = 498
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 505 LHGRPFHASRCSVDTQKNKSSCPFPIISLSPDVSI 401
LHG H + V T SCPF I+ ++P++ +
Sbjct: 297 LHGDMSHTQKQGVYTAIRDPSCPFKILYVTPEILV 331
>SB_20382| Best HMM Match : WD40 (HMM E-Value=1.7e-23)
Length = 437
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 317 NLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 415
+L H L VM +D + ++ IVT S D+N +W
Sbjct: 241 SLYGHKLPVMAMDISSDSTLIVTGSADKNIKIW 273
>SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 459
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/47 (27%), Positives = 19/47 (40%)
Frame = +2
Query: 290 EGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDD 430
+ N W H + +DW N N +CS D+ +V G D
Sbjct: 215 DANTWDVKQQFAFHQAPTLDVDW-QNNNSFASCSTDKLIHVCRLGLD 260
>SB_3357| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1228
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +2
Query: 257 PNNNEVHIYKKEG-NDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 415
P ++E+ KKE N KQ H RV+G++ + + +VT S D + VW
Sbjct: 827 PPDDEMTEKKKEPKNVIKQVVCWRAHLTRVVGVEHVDSADAVVTASTDLSVRVW 880
>SB_34456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 454
Score = 29.1 bits (62), Expect = 3.4
Identities = 32/120 (26%), Positives = 48/120 (40%), Gaps = 6/120 (5%)
Frame = +2
Query: 329 HDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVLLRINR-AATCVKWSPME 505
HD RV W+PN + + S D +W + + T L +R + A T V++ P
Sbjct: 87 HDDRVKSCAWSPNGEYVASSSADGRVTLW----EPRLGTALSKIRAHEDAVTHVEFYPFV 142
Query: 506 NKFAV----GSGARLISICY-FEKENNWWVSKHIKKPIRSTVTSIDWHPNNILLVAGSAD 670
+ +V SG R + + F K K K SI P+ LL G +D
Sbjct: 143 STNSVPVLFTSGGRACRVWHPFRKRKQLESIKPHKAGDEVEAFSIS--PDGTLLATGGSD 200
>SB_36508| Best HMM Match : WD40 (HMM E-Value=0.006)
Length = 1103
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = +2
Query: 323 VEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGD 427
V+ ++ +M I W+ +T+RI+T + +W+ G+
Sbjct: 545 VKGNVAIMSIQWSKDTSRILTLNSQGTVELWSVGN 579
>SB_11879| Best HMM Match : WD40 (HMM E-Value=5.8e-21)
Length = 447
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 290 EGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDD 430
+ N WKQ +L H L V I ++ + RI++ S DR+ V+ D
Sbjct: 235 DANIWKQVCSLPGHSLTVTQIAFSHSGQRILSVSRDRSWAVFRLRQD 281
>SB_54131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3160
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 260 NNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRI 379
+NNEV + K D +NN VE+D + ID + N +
Sbjct: 1609 SNNEVELAKSTNIDKLVSNNEVEYDAKSTNIDKLVSNNEV 1648
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 326 EHDLRVMGIDWAPNT--NRIVTCSVDRNAYVWTQGDDG 433
EHD V + W+ N + +CS DR +W + G
Sbjct: 3103 EHDGPVWQVSWSHPMFGNLLASCSYDRKVIIWKESSSG 3140
>SB_40185| Best HMM Match : WD40 (HMM E-Value=0)
Length = 503
Score = 28.7 bits (61), Expect = 4.5
Identities = 36/152 (23%), Positives = 62/152 (40%), Gaps = 7/152 (4%)
Frame = +2
Query: 236 RSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 415
R + F+PN ++ ++ LV H V + + +++CS D+ +W
Sbjct: 51 RKKFEFNPNAPPLNRIPFPEMTASESRRLVGHSGPVFAVSIDHDNKFLLSCSEDKTIRLW 110
Query: 416 TQGDDGKWATTLVLLR-INRAATCVKWSPMENKFAVGSGARLISICYFEKENNWWVSKHI 592
+ TTLV R N V++ P + FA S R + W + H
Sbjct: 111 SLFT----FTTLVAYRGHNYPVWDVQFCPRGHYFASTSHDRTARL---------WSTDH- 156
Query: 593 KKPIR------STVTSIDWHPNNILLVAGSAD 670
++P+R S V + +HPN + GS+D
Sbjct: 157 QQPLRIFAGHVSDVNKVAFHPNCNYIATGSSD 188
>SB_25971| Best HMM Match : Sushi (HMM E-Value=0.54)
Length = 275
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 451 CSSAYQPSSDLREMVSHGEQVCCRVRS 531
C + YQP S L E +SHG + RV S
Sbjct: 93 CQAGYQPVSRLCEGLSHGSRYVLRVSS 119
>SB_22072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 642
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +2
Query: 275 HIYKKEGND---WKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 415
HI E ++ W + L H V + W+P+ ++++ SVD +A +W
Sbjct: 158 HILDDENDNLETWTVSKMLRGHIEDVYDLAWSPDGTQLLSGSVDNSAIIW 207
>SB_5414| Best HMM Match : WD40 (HMM E-Value=6.6e-15)
Length = 490
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +2
Query: 221 AWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAP-NTNRIVTCSVD 397
A + D + + ++N +I+K D + L H V + W P + ++VTCS D
Sbjct: 82 ALSPDDNYLLSGSSDNNAYIWKVSDAD-RPPVCLRGHAGEVTSVVWCPQDITKVVTCSDD 140
Query: 398 RNAYVW 415
+W
Sbjct: 141 TTVRIW 146
>SB_50716| Best HMM Match : WD40 (HMM E-Value=0)
Length = 494
Score = 28.3 bits (60), Expect = 6.0
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Frame = +2
Query: 233 DRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYV 412
D + I +++ V ++ D N L+ H V+ + + +VTCS DR+ V
Sbjct: 239 DENVIVTGSSDSTVRVWNVHAGD--MLNTLIHHCEAVLHLRF--QEGMMVTCSKDRSIAV 294
Query: 413 WTQGDDGKWATTLVLLRINRAATCVKWSPMENKFAV-GSGARLISI 547
W + VL+ +RAA V ++K+ V SG R I +
Sbjct: 295 WDMQSPTDISLRRVLVG-HRAA--VNVVDFDDKYIVSASGDRTIKV 337
>SB_49916| Best HMM Match : ig (HMM E-Value=8.5e-06)
Length = 465
Score = 28.3 bits (60), Expect = 6.0
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Frame = +2
Query: 194 DSC-APITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRV---MGIDWA 361
D C A ++ +A + + A +P HIY+ + WK T+ V + + ID
Sbjct: 284 DECEALVSSNATREHAHEAAETPTLLPSHIYETTNDTWKTTSTSVNSETAIGLYSAIDNG 343
Query: 362 PNTNRIVTCSVDRNAYVWTQGD 427
N + S D N + T D
Sbjct: 344 MNDDVNPYASADHNPEITTSKD 365
>SB_30961| Best HMM Match : I-set (HMM E-Value=0)
Length = 1018
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = -1
Query: 430 IISLSPDVSITVNRTRNNTV 371
I ++SPDVS+T+NRT + T+
Sbjct: 671 ITAISPDVSVTINRTDSVTL 690
>SB_29629| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 264
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 245 IAFSPNNNEVHIYKKEGNDWK 307
I F PN + H Y+K+G WK
Sbjct: 184 IRFDPNPSIAHRYRKQGRPWK 204
>SB_20916| Best HMM Match : zf-C3HC4 (HMM E-Value=0.013)
Length = 507
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/61 (24%), Positives = 31/61 (50%)
Frame = -1
Query: 493 PFHASRCSVDTQKNKSSCPFPIISLSPDVSITVNRTRNNTVGVGSPINPHHSKVVFHKVV 314
P + S+ ++ + ++C F + L+ + +RT + + G PINPH ++ +V
Sbjct: 428 PPYISQSTLLGRNGSNACTFISLILAHSYITSASRT-SIQLSRGPPINPHWLSMMLSAIV 486
Query: 313 C 311
C
Sbjct: 487 C 487
>SB_5745| Best HMM Match : Extensin_2 (HMM E-Value=0.43)
Length = 607
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 218 HAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEH 331
H +N + + ++ N+N+ HIY GND +N +H
Sbjct: 178 HIYNDNSNDHIYNDNSND-HIYNDNGNDHIYNDNSNDH 214
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +2
Query: 218 HAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTN 373
H +N + + ++ N+N+ HIY ND +N +H G D N N
Sbjct: 160 HIYNDNSNDHIYNDNSND-HIYNDNSNDHIYNDNSNDHIYNDNGNDHIYNDN 210
>SB_58364| Best HMM Match : WD40 (HMM E-Value=2.8026e-45)
Length = 426
Score = 28.3 bits (60), Expect = 6.0
Identities = 33/148 (22%), Positives = 56/148 (37%), Gaps = 11/148 (7%)
Frame = +2
Query: 266 NEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW--TQGDDGKW 439
N ++ ++ D+ + + +H +AP+ N I + + N +W TQ D
Sbjct: 36 NNKSVFIRDVEDFAKCDVYTDHAKDTTVAAYAPSGNYICSGDITGNVRIWDTTQKDH--- 92
Query: 440 ATTLVLLRINRAATCVKWSPMENKFAV-GSGARL-ISICYFEKENNW-------WVSKHI 592
I A + WSP + V G G IC ++ + KH+
Sbjct: 93 LLKYEYPCIGGAIKDIAWSPDSKRIVVVGEGRESPFRICTGSEDRTVGFHEGPPFKFKHL 152
Query: 593 KKPIRSTVTSIDWHPNNILLVAGSADFK 676
+ V I + P+ +AGSAD K
Sbjct: 153 NSEPTNFVNCIGYSPSGDFFIAGSADGK 180
>SB_51303| Best HMM Match : WD40 (HMM E-Value=3.5e-40)
Length = 400
Score = 28.3 bits (60), Expect = 6.0
Identities = 27/118 (22%), Positives = 45/118 (38%), Gaps = 2/118 (1%)
Frame = +2
Query: 329 HDLRVMGIDWAPN-TNRIVTCSVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPME 505
H + + W P+ + +T SVDR VW + + T I K++
Sbjct: 98 HRSSIETVQWYPHDSGMFLTSSVDRTLKVWDT-NALQVVETFNFEGIVYKHQAAKYAKRH 156
Query: 506 NKFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTVTSIDWHP-NNILLVAGSADFK 676
+ A + + +C + + HI + + V S+ W P N LL G D K
Sbjct: 157 SLVATANEDSRVYLCDLRTGS----ASHILRGHATAVLSVSWSPLNQYLLATGGRDNK 210
>SB_46779| Best HMM Match : PP2C_C (HMM E-Value=1.7)
Length = 405
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 585 LDTHQLFSFSK*QIDINLAPDPTANLFSMGDHFTQVAARLIRRRT 451
L +H SF K Q +L P + G H ++ + RL+RR T
Sbjct: 89 LRSHSFGSFFKEQNSDSLLPHKPRTISESGSHSSERSPRLLRRST 133
>SB_41907| Best HMM Match : Reprolysin (HMM E-Value=9.2e-05)
Length = 656
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1
Query: 517 SKLVLHGRPFHASRCSVDTQKNKSSC 440
S L+LHGR +RCS D NK C
Sbjct: 607 SSLILHGRVIDGTRCSSD-DLNKDVC 631
>SB_8765| Best HMM Match : WD40 (HMM E-Value=3.9e-15)
Length = 481
Score = 27.9 bits (59), Expect = 7.9
Identities = 26/101 (25%), Positives = 39/101 (38%)
Frame = +2
Query: 329 HDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMEN 508
H+ V+ IDW P N I++ D VW D T V W+P
Sbjct: 50 HEGIVLKIDWNPINNLILSGGEDCKYKVW----DSYGRVLYSSAPHEYPITSVSWAPDGE 105
Query: 509 KFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTVTSIDW 631
VGS + +C + W S ++KP ++ +I W
Sbjct: 106 LLGVGS-FNTLRLC----DRTGW-SYALEKPNTGSIFNIAW 140
>SB_37321| Best HMM Match : Pkinase (HMM E-Value=2.4e-27)
Length = 592
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -1
Query: 442 CPFPIISLSPDVSITVNRTRNNTVGVGSPINPHHSKVVFHKVVCL 308
CP+ S SP V+ T RTR+ T+ + S V H++ CL
Sbjct: 405 CPYAP-STSPRVTSTTFRTRHRTLSARFFSDVPESHVYVHRISCL 448
>SB_33497| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 446 TLVLLRINRAATCVKWSPMENKFAVGSGARLISIC 550
T+ LL +A V + P FA+GS ++++ IC
Sbjct: 837 TIALLEDLQAIRAVAFHPTGKLFAIGSNSKILRIC 871
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 320 LVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWT 418
+ +HD +++ W P V+ S DR A +WT
Sbjct: 1273 VAQHDDKMIQCRWHPFLMAFVSSSADRTARLWT 1305
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,442,565
Number of Sequences: 59808
Number of extensions: 476303
Number of successful extensions: 1453
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1442
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1733301648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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