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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11f04
         (676 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110501-4|CAB54510.1|  368|Caenorhabditis elegans Hypothetical ...   242   2e-64
AL034393-7|CAA22322.2|  337|Caenorhabditis elegans Hypothetical ...    46   2e-05
AC024818-3|AAF60780.2|  453|Caenorhabditis elegans Hypothetical ...    45   4e-05
AC024214-18|AAF36083.1|  211|Caenorhabditis elegans Nuclear pore...    45   6e-05
AC024214-17|AAF36082.1|  313|Caenorhabditis elegans Nuclear pore...    45   6e-05
AJ011523-1|CAB38019.1|  760|Caenorhabditis elegans CHE-2 protein...    43   2e-04
AC006635-2|AAK68383.1|  760|Caenorhabditis elegans Abnormal chem...    43   2e-04
U42835-4|AAA83588.1|  611|Caenorhabditis elegans Uncoordinated p...    42   3e-04
AF324437-1|AAK11613.1|  611|Caenorhabditis elegans UNC-78 protein.     42   3e-04
Z81099-1|CAB03187.1|  600|Caenorhabditis elegans Hypothetical pr...    39   0.003
AC024857-1|AAK31566.2|  869|Caenorhabditis elegans Temporarily a...    39   0.004
AL132904-13|CAC35846.4|  778|Caenorhabditis elegans Hypothetical...    37   0.011
U21322-6|AAN65314.2|  669|Caenorhabditis elegans Hypothetical pr...    37   0.015
U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical pr...    37   0.015
Z83120-6|CAB76722.1|  809|Caenorhabditis elegans Hypothetical pr...    36   0.035
Z35663-5|CAA84727.1|  681|Caenorhabditis elegans Hypothetical pr...    34   0.081
U42835-5|AAO61444.1|  517|Caenorhabditis elegans Uncoordinated p...    33   0.19 
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr...    32   0.32 
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr...    32   0.32 
Z81490-1|CAB04014.1|  510|Caenorhabditis elegans Hypothetical pr...    32   0.32 
Z80215-3|CAB02270.1|  496|Caenorhabditis elegans Hypothetical pr...    32   0.32 
Z47358-8|CAA87433.1|  702|Caenorhabditis elegans Hypothetical pr...    32   0.32 
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.      32   0.32 
AL110500-12|CAB60432.1|  362|Caenorhabditis elegans Hypothetical...    32   0.32 
AF330595-1|AAK00353.1|  510|Caenorhabditis elegans SMU-1 protein.      32   0.32 
U23412-5|AAK21467.2|  492|Caenorhabditis elegans Hypothetical pr...    32   0.43 
Z79756-4|CAB02116.2|  478|Caenorhabditis elegans Hypothetical pr...    31   0.75 
AL021481-1|CAA16333.1|  363|Caenorhabditis elegans Hypothetical ...    31   0.75 
U23139-7|AAK31492.1|  929|Caenorhabditis elegans Hypothetical pr...    30   1.3  
AC006708-15|AAF60425.1|  504|Caenorhabditis elegans Hypothetical...    30   1.3  
U23176-7|AAC46713.4|  454|Caenorhabditis elegans Hypothetical pr...    30   1.7  
U58762-2|AAK39302.1|  722|Caenorhabditis elegans Hypothetical pr...    29   3.0  
U58762-1|AAK39301.1|  732|Caenorhabditis elegans Hypothetical pr...    29   3.0  
U21321-1|AAG00051.1|  507|Caenorhabditis elegans Fizzy (cdc20 pr...    29   3.0  
AF067942-4|AAG45573.2|  324|Caenorhabditis elegans Hypothetical ...    29   3.0  
Z66561-2|CAA91460.1|  331|Caenorhabditis elegans Hypothetical pr...    29   4.0  
Z31590-4|CAD27606.1|  495|Caenorhabditis elegans Hypothetical pr...    29   4.0  
Z31590-3|CAD27605.1|  607|Caenorhabditis elegans Hypothetical pr...    29   4.0  
Z31590-2|CAD27604.1|  538|Caenorhabditis elegans Hypothetical pr...    29   4.0  
Z31590-1|CAA83461.1|  605|Caenorhabditis elegans Hypothetical pr...    29   4.0  
Z81531-5|CAB04319.1| 1152|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z49127-9|CAA88948.1|  340|Caenorhabditis elegans Hypothetical pr...    28   5.3  
X17497-1|CAA35532.1|  340|Caenorhabditis elegans G-protein protein.    28   5.3  
AF291846-1|AAK55963.1|  340|Caenorhabditis elegans heterotrimeri...    28   5.3  
Z81523-5|CAB04240.2|  298|Caenorhabditis elegans Hypothetical pr...    28   7.0  
Z81513-13|CAB04180.2| 1213|Caenorhabditis elegans Hypothetical p...    27   9.2  
AF106576-4|AAC78176.1|  473|Caenorhabditis elegans Hypothetical ...    27   9.2  

>AL110501-4|CAB54510.1|  368|Caenorhabditis elegans Hypothetical
           protein Y79H2A.6 protein.
          Length = 368

 Score =  242 bits (592), Expect = 2e-64
 Identities = 103/157 (65%), Positives = 125/157 (79%)
 Frame = +2

Query: 206 PITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVT 385
           PITCHAWNKDR+QIA S ++N++HI++    DW+  + L EHDL V G+DW   TNRIV+
Sbjct: 16  PITCHAWNKDRTQIAVSASSNDIHIFEWRNGDWQSIHTLSEHDLPVTGLDWGTKTNRIVS 75

Query: 386 CSVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMENKFAVGSGARLISICYFEKE 565
           CS D+NA+VWT  D   W   LVL+R NRAAT VKWSP+ENKFAVGSGA+L+S+CY+EKE
Sbjct: 76  CSQDKNAFVWTF-DKNVWKPELVLVRFNRAATYVKWSPLENKFAVGSGAKLVSVCYYEKE 134

Query: 566 NNWWVSKHIKKPIRSTVTSIDWHPNNILLVAGSADFK 676
           N+WWVSK IKKPIRSTVT +DWH NN+LL  GS DFK
Sbjct: 135 NDWWVSKQIKKPIRSTVTCLDWHSNNVLLAVGSCDFK 171



 Score = 38.3 bits (85), Expect = 0.005
 Identities = 24/115 (20%), Positives = 44/115 (38%), Gaps = 1/115 (0%)
 Frame = +2

Query: 185 TFGDSCAPITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAP 364
           T  +   P+T   W    ++I     +    ++  + N WK    LV  +     + W+P
Sbjct: 53  TLSEHDLPVTGLDWGTKTNRIVSCSQDKNAFVWTFDKNVWKPELVLVRFNRAATYVKWSP 112

Query: 365 NTNRIVTCSVDRNAYV-WTQGDDGKWATTLVLLRINRAATCVKWSPMENKFAVGS 526
             N+    S  +   V + + ++  W +  +   I    TC+ W       AVGS
Sbjct: 113 LENKFAVGSGAKLVSVCYYEKENDWWVSKQIKKPIRSTVTCLDWHSNNVLLAVGS 167


>AL034393-7|CAA22322.2|  337|Caenorhabditis elegans Hypothetical
           protein Y18D10A.9 protein.
          Length = 337

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 34/150 (22%), Positives = 64/150 (42%)
 Frame = +2

Query: 221 AWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDR 400
           A++ D   +  +  +  V +Y++E  ++ + N L  H+  V    ++ +   + TCS D+
Sbjct: 74  AFSNDGKCLVSASFDASVVVYQQEDGEFAEVNKLEGHESEVKCAVFSKSDEFLATCSRDK 133

Query: 401 NAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMENKFAVGSGARLISICYFEKENNWWV 580
           + + W Q +D  ++ + +L    +    V W P E+     S    I    F+ E +W  
Sbjct: 134 SVWFWQQDEDEDFSVSSILQPHTQDVKQVAWHPTEDLLVSCSYDSSIRFYRFDGE-DWVT 192

Query: 581 SKHIKKPIRSTVTSIDWHPNNILLVAGSAD 670
            + I      TV SI +      LV    D
Sbjct: 193 QQKIDGCHVGTVWSIAFDTEGHRLVTVGED 222


>AC024818-3|AAF60780.2|  453|Caenorhabditis elegans Hypothetical
           protein Y54H5A.1 protein.
          Length = 453

 Score = 45.2 bits (102), Expect = 4e-05
 Identities = 35/155 (22%), Positives = 65/155 (41%), Gaps = 5/155 (3%)
 Frame = +2

Query: 221 AWNKDRS-QIAFSPNNNEVHIYK-KEGNDWKQ-TNNLVEHDLRVMGIDWAPN-TNRIVTC 388
           AW+  ++  +A      ++++++ KEG  W    N L  H   V  + W+P  T  + +C
Sbjct: 235 AWSSLKTGDLATGDIIKKIYLWQMKEGGQWAVGANPLTGHKKSVEDLAWSPTETGLLASC 294

Query: 389 SVDRNAYVWTQGDDGKWATTLVLLRINRA-ATCVKWSPMENKFAVGSGARLISICYFEKE 565
           S D +  +W      K A    + + + +    + W+  EN    G     + I +  K 
Sbjct: 295 SADGSIKLWDTRSAPKDACVCTVQKAHESDVNVISWNRHENLIVSGGDDGELKI-WSLKT 353

Query: 566 NNWWVSKHIKKPIRSTVTSIDWHPNNILLVAGSAD 670
             +     + K   S +TS+DWHP+       S +
Sbjct: 354 IQFGQPVALFKYHNSPITSVDWHPHETTTFMASGE 388


>AC024214-18|AAF36083.1|  211|Caenorhabditis elegans Nuclear pore
           complex protein protein20, isoform b protein.
          Length = 211

 Score = 44.8 bits (101), Expect = 6e-05
 Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
 Frame = +2

Query: 320 LVEHDLRVMGIDWA-PNTNRIV-TCSVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKW 493
           LV H   V  + WA P    ++ + S D+   +W +   G+W           + TCV +
Sbjct: 54  LVGHSGPVWKVSWAHPKYGGLLASASYDKKVIIWNE-QQGRWQKAYEWAAHEASTTCVAF 112

Query: 494 SPMENKFAVGSGARL--ISICYFEKENNWWVSKHIKKPIRSTVTSIDWHPNN 643
           +P +    + S +    I I  ++  +N W+S  I+K     V S+ W P +
Sbjct: 113 APHQYGLMLASASADGDIGILRYDNSSNEWISSKIQKCHEQGVNSVCWAPGS 164



 Score = 27.5 bits (58), Expect = 9.2
 Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 6/57 (10%)
 Frame = +2

Query: 281 YKKEGNDWKQTNNLVEHDLRVMGIDWAPNT------NRIVTCSVDRNAYVWTQGDDG 433
           Y    N+W  +     H+  V  + WAP +       R+V+   D+N  +W     G
Sbjct: 135 YDNSSNEWISSKIQKCHEQGVNSVCWAPGSADPAAKKRLVSAGNDKNVKIWALSQFG 191


>AC024214-17|AAF36082.1|  313|Caenorhabditis elegans Nuclear pore
           complex protein protein20, isoform a protein.
          Length = 313

 Score = 44.8 bits (101), Expect = 6e-05
 Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
 Frame = +2

Query: 320 LVEHDLRVMGIDWA-PNTNRIV-TCSVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKW 493
           LV H   V  + WA P    ++ + S D+   +W +   G+W           + TCV +
Sbjct: 54  LVGHSGPVWKVSWAHPKYGGLLASASYDKKVIIWNE-QQGRWQKAYEWAAHEASTTCVAF 112

Query: 494 SPMENKFAVGSGARL--ISICYFEKENNWWVSKHIKKPIRSTVTSIDWHPNN 643
           +P +    + S +    I I  ++  +N W+S  I+K     V S+ W P +
Sbjct: 113 APHQYGLMLASASADGDIGILRYDNSSNEWISSKIQKCHEQGVNSVCWAPGS 164



 Score = 30.3 bits (65), Expect = 1.3
 Identities = 19/83 (22%), Positives = 30/83 (36%), Gaps = 7/83 (8%)
 Frame = +2

Query: 281 YKKEGNDWKQTNNLVEHDLRVMGIDWAPNT------NRIVTCSVDRNAYVWTQGD-DGKW 439
           Y    N+W  +     H+  V  + WAP +       R+V+   D+N  +W   D   +W
Sbjct: 135 YDNSSNEWISSKIQKCHEQGVNSVCWAPGSADPAAKKRLVSAGNDKNVKIWAFDDATNEW 194

Query: 440 ATTLVLLRINRAATCVKWSPMEN 508
                L           W P+ N
Sbjct: 195 ILEKTLAGHTDFVREAAWCPVTN 217


>AJ011523-1|CAB38019.1|  760|Caenorhabditis elegans CHE-2 protein
           protein.
          Length = 760

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 38/153 (24%), Positives = 61/153 (39%)
 Frame = +2

Query: 209 ITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTC 388
           + C AW+   S + +    N  H Y K             HD  ++  DW P ++ IVT 
Sbjct: 148 VYCVAWDSTSSNVLYC---NADHCYIKSLKMQVAPIKWKAHDGIILCCDWNPTSDLIVTG 204

Query: 389 SVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMENKFAVGSGARLISICYFEKEN 568
             D    VW    DG           +   T + W+     FAVGS   ++ +C    ++
Sbjct: 205 GEDLKFKVW----DGFGQILFNSSVHDYPITSISWNTDGTLFAVGS-HNILRLC---DKS 256

Query: 569 NWWVSKHIKKPIRSTVTSIDWHPNNILLVAGSA 667
            W  S  ++K    +V ++ W P+   L  G+A
Sbjct: 257 GW--SHSLEKMNAGSVMALSWSPDGTQLAVGTA 287


>AC006635-2|AAK68383.1|  760|Caenorhabditis elegans Abnormal
           chemotaxis protein 2 protein.
          Length = 760

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 38/153 (24%), Positives = 61/153 (39%)
 Frame = +2

Query: 209 ITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTC 388
           + C AW+   S + +    N  H Y K             HD  ++  DW P ++ IVT 
Sbjct: 148 VYCVAWDSTSSNVLYC---NADHCYIKSLKMQVAPIKWKAHDGIILCCDWNPTSDLIVTG 204

Query: 389 SVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMENKFAVGSGARLISICYFEKEN 568
             D    VW    DG           +   T + W+     FAVGS   ++ +C    ++
Sbjct: 205 GEDLKFKVW----DGFGQILFNSSVHDYPITSISWNTDGTLFAVGS-HNILRLC---DKS 256

Query: 569 NWWVSKHIKKPIRSTVTSIDWHPNNILLVAGSA 667
            W  S  ++K    +V ++ W P+   L  G+A
Sbjct: 257 GW--SHSLEKMNAGSVMALSWSPDGTQLAVGTA 287


>U42835-4|AAA83588.1|  611|Caenorhabditis elegans Uncoordinated
           protein 78, isoform a protein.
          Length = 611

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 33/151 (21%), Positives = 63/151 (41%), Gaps = 1/151 (0%)
 Frame = +2

Query: 212 TCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCS 391
           +C A + D+  +A    +++VH+YK  G    +   +V H   +  + ++ N   +V   
Sbjct: 452 SCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIV-HPAEITSVAFSNNGAFLVATD 510

Query: 392 VDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMENKFAVGSGARLISICYFEKENN 571
             R    ++  ++ + A T           CV WSP   + A GS    + +    K ++
Sbjct: 511 QSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSD 570

Query: 572 WWVSKHIK-KPIRSTVTSIDWHPNNILLVAG 661
             +   IK     S+V S+ W     ++ AG
Sbjct: 571 HPII--IKGAHAMSSVNSVIWLNETTIVSAG 599



 Score = 35.9 bits (79), Expect = 0.026
 Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
 Frame = +2

Query: 203 APITCHAWNKDRSQIAFSPNNNEVHIYKKEGN-DWKQTNNLVEHDLRVMGIDWAPNTNRI 379
           A IT  A++ + + +  +  + +V  Y    N +   TN+   H  +V  + W+P+  R+
Sbjct: 492 AEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRL 551

Query: 380 VTCSVDRNAYVW 415
            T S+D +  VW
Sbjct: 552 ATGSLDNSVIVW 563



 Score = 33.1 bits (72), Expect = 0.19
 Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
 Frame = +2

Query: 185 TFGDSCAPITCHAWNKDRSQIAFSPNNNEVHIYK-----KEGNDWKQTNNLVEHDLRVMG 349
           TFG+    +    +N D S  A +  +  + +Y      K G     +   V H   V G
Sbjct: 185 TFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFG 244

Query: 350 IDWAPNTNRIVTCSVDRNAYVW 415
           + W+P+  +I + S D+   +W
Sbjct: 245 LTWSPDGTKIASASADKTIKIW 266


>AF324437-1|AAK11613.1|  611|Caenorhabditis elegans UNC-78 protein.
          Length = 611

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 33/151 (21%), Positives = 63/151 (41%), Gaps = 1/151 (0%)
 Frame = +2

Query: 212 TCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCS 391
           +C A + D+  +A    +++VH+YK  G    +   +V H   +  + ++ N   +V   
Sbjct: 452 SCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIV-HPAEITSVAFSNNGAFLVATD 510

Query: 392 VDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMENKFAVGSGARLISICYFEKENN 571
             R    ++  ++ + A T           CV WSP   + A GS    + +    K ++
Sbjct: 511 QSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSD 570

Query: 572 WWVSKHIK-KPIRSTVTSIDWHPNNILLVAG 661
             +   IK     S+V S+ W     ++ AG
Sbjct: 571 HPII--IKGAHAMSSVNSVIWLNETTIVSAG 599



 Score = 35.9 bits (79), Expect = 0.026
 Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
 Frame = +2

Query: 203 APITCHAWNKDRSQIAFSPNNNEVHIYKKEGN-DWKQTNNLVEHDLRVMGIDWAPNTNRI 379
           A IT  A++ + + +  +  + +V  Y    N +   TN+   H  +V  + W+P+  R+
Sbjct: 492 AEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRL 551

Query: 380 VTCSVDRNAYVW 415
            T S+D +  VW
Sbjct: 552 ATGSLDNSVIVW 563



 Score = 33.1 bits (72), Expect = 0.19
 Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
 Frame = +2

Query: 185 TFGDSCAPITCHAWNKDRSQIAFSPNNNEVHIYK-----KEGNDWKQTNNLVEHDLRVMG 349
           TFG+    +    +N D S  A +  +  + +Y      K G     +   V H   V G
Sbjct: 185 TFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFG 244

Query: 350 IDWAPNTNRIVTCSVDRNAYVW 415
           + W+P+  +I + S D+   +W
Sbjct: 245 LTWSPDGTKIASASADKTIKIW 266


>Z81099-1|CAB03187.1|  600|Caenorhabditis elegans Hypothetical
           protein K08F9.2 protein.
          Length = 600

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 30/150 (20%), Positives = 58/150 (38%)
 Frame = +2

Query: 212 TCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCS 391
           TC A+  ++S +A    + +VH+YK  G+   +    +EH   +  + ++ +   +    
Sbjct: 440 TCVAFCAEKSLVAVGGKDAKVHVYKLNGDGRLEELKKIEHSAEITAVSFSDDGEYLAVTD 499

Query: 392 VDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMENKFAVGSGARLISICYFEKENN 571
           + R    ++   D    +             V WSP   + A GS    + I   +K   
Sbjct: 500 LARKVIPYSVSTDFSVTSPNSWTFHTSKVLTVAWSPDNQRLATGSIDTSVIIWDMKKPGE 559

Query: 572 WWVSKHIKKPIRSTVTSIDWHPNNILLVAG 661
             V      P+ S+V  + W     ++ AG
Sbjct: 560 HPVIIKGAHPM-SSVNVVRWLDETTVVSAG 588



 Score = 35.1 bits (77), Expect = 0.046
 Identities = 22/99 (22%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
 Frame = +2

Query: 203 APITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQT--NNLVEHDLRVMGIDWAPNTNR 376
           A IT  +++ D   +A +    +V  Y     D+  T  N+   H  +V+ + W+P+  R
Sbjct: 481 AEITAVSFSDDGEYLAVTDLARKVIPYSVS-TDFSVTSPNSWTFHTSKVLTVAWSPDNQR 539

Query: 377 IVTCSVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKW 493
           + T S+D +  +W     G+    +       +   V+W
Sbjct: 540 LATGSIDTSVIIWDMKKPGEHPVIIKGAHPMSSVNVVRW 578



 Score = 32.7 bits (71), Expect = 0.25
 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
 Frame = +2

Query: 224 WNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNL-----VEHDLRVMGIDWAPNTNRIVTC 388
           +N D S  A + ++  V +Y   G D ++   L     V H   +  + W+P+ +RI T 
Sbjct: 198 YNNDGSLFASTGSDGTVVLYN--GVDGEKVGVLEDAKGVAHTGSIFALAWSPDQSRIATA 255

Query: 389 SVDRNAYVW 415
           S D++  +W
Sbjct: 256 SADKSVKIW 264


>AC024857-1|AAK31566.2|  869|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 305 protein.
          Length = 869

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 1/128 (0%)
 Frame = +2

Query: 281 YKKEGNDWKQTN-NLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVL 457
           +K   +D  + N NL  H   +  + W  + +++ +C      YVW + DD +W+  LV 
Sbjct: 51  FKPTPDDLTRYNFNLRGHHNAIRMVTWNKSQSKLASCDASGIIYVWVRNDD-RWSVELVN 109

Query: 458 LRINRAATCVKWSPMENKFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTVTSIDWHP 637
            R  + +  + WSP      +      + I     +  W  S     P+ + VT   W P
Sbjct: 110 DRGVKVSD-LSWSPCGGSALICYDDNFVLIGSANGQRVWSNS----FPLPAAVTCGVWAP 164

Query: 638 NNILLVAG 661
           ++  LV G
Sbjct: 165 DSRQLVLG 172


>AL132904-13|CAC35846.4|  778|Caenorhabditis elegans Hypothetical
           protein Y111B2A.17 protein.
          Length = 778

 Score = 37.1 bits (82), Expect = 0.011
 Identities = 14/42 (33%), Positives = 26/42 (61%)
 Frame = +2

Query: 296 NDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQ 421
           ++W + + ++ H L V  I W P+  R++T S DR A ++T+
Sbjct: 596 SNWSKKSEIIGHQLTVTQIAWNPSGTRLLTVSRDRTAKLYTE 637


>U21322-6|AAN65314.2|  669|Caenorhabditis elegans Hypothetical
           protein K10D2.1b protein.
          Length = 669

 Score = 36.7 bits (81), Expect = 0.015
 Identities = 28/127 (22%), Positives = 53/127 (41%), Gaps = 5/127 (3%)
 Frame = +2

Query: 302 WKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVLLRINRAAT 481
           +K+   L  H + V+ ++W+PN   + + S+D    ++         T  VL  I     
Sbjct: 123 YKECCVLRGHSMEVLTVEWSPNGKYLASGSIDYRIIIYNARKLPDRIT--VLNDIQLPVK 180

Query: 482 CVKWSPMENKFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTV-----TSIDWHPNNI 646
            + W P+    A   G + +    F   ++W   K + +P  S +     T +DW P+  
Sbjct: 181 GLSWDPIGKYLASLEGDKKLR---FWATDSWQCVKSVTEPFESNIEETMLTRLDWSPDGK 237

Query: 647 LLVAGSA 667
            L+  +A
Sbjct: 238 YLMTPAA 244


>U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical
           protein K10D2.1a protein.
          Length = 1223

 Score = 36.7 bits (81), Expect = 0.015
 Identities = 28/127 (22%), Positives = 53/127 (41%), Gaps = 5/127 (3%)
 Frame = +2

Query: 302 WKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVLLRINRAAT 481
           +K+   L  H + V+ ++W+PN   + + S+D    ++         T  VL  I     
Sbjct: 411 YKECCVLRGHSMEVLTVEWSPNGKYLASGSIDYRIIIYNARKLPDRIT--VLNDIQLPVK 468

Query: 482 CVKWSPMENKFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTV-----TSIDWHPNNI 646
            + W P+    A   G + +    F   ++W   K + +P  S +     T +DW P+  
Sbjct: 469 GLSWDPIGKYLASLEGDKKLR---FWATDSWQCVKSVTEPFESNIEETMLTRLDWSPDGK 525

Query: 647 LLVAGSA 667
            L+  +A
Sbjct: 526 YLMTPAA 532


>Z83120-6|CAB76722.1|  809|Caenorhabditis elegans Hypothetical
           protein R06A4.9 protein.
          Length = 809

 Score = 35.5 bits (78), Expect = 0.035
 Identities = 32/157 (20%), Positives = 60/157 (38%), Gaps = 2/157 (1%)
 Frame = +2

Query: 206 PITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVT 385
           P+    W+ +  ++       E  ++   G  +     L  HD  +  + WA N   ++ 
Sbjct: 135 PVYSVCWSPEGKRLITGCQTGEFTLWN--GTAFNFETILQAHDSAIRALKWASNEQWLL- 191

Query: 386 CSVDRNAYV--WTQGDDGKWATTLVLLRINRAATCVKWSPMENKFAVGSGARLISICYFE 559
            S D+  YV  W    +      +     + A   + ++P + KFA  S      +  F 
Sbjct: 192 -SADQGGYVKYWQPNMNN---AHMFSAHKDEAIRGLAFAPTDVKFATASDDGTARVWDFA 247

Query: 560 KENNWWVSKHIKKPIRSTVTSIDWHPNNILLVAGSAD 670
           +    +  + + +   + V  IDWHP   L+  GS D
Sbjct: 248 R----YTEERVLRGHGAEVRCIDWHPTKGLIATGSRD 280


>Z35663-5|CAA84727.1|  681|Caenorhabditis elegans Hypothetical
           protein T04A8.7a protein.
          Length = 681

 Score = 34.3 bits (75), Expect = 0.081
 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
 Frame = +2

Query: 296 NDWKQTNNLVEHDLRVMGIDWAPNTNRIVTC----SVDRNAYVWTQGDDGKWATTL 451
           + +KQ    V+ D  V G++WAP   ++       + D+NA V+ + + GKW+ T+
Sbjct: 51  SSYKQFGLNVQPDNSVKGLEWAPAAEKLALIGDFNNWDQNANVYKKEEHGKWSITV 106


>U42835-5|AAO61444.1|  517|Caenorhabditis elegans Uncoordinated
           protein 78, isoform b protein.
          Length = 517

 Score = 33.1 bits (72), Expect = 0.19
 Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
 Frame = +2

Query: 185 TFGDSCAPITCHAWNKDRSQIAFSPNNNEVHIYK-----KEGNDWKQTNNLVEHDLRVMG 349
           TFG+    +    +N D S  A +  +  + +Y      K G     +   V H   V G
Sbjct: 185 TFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFG 244

Query: 350 IDWAPNTNRIVTCSVDRNAYVW 415
           + W+P+  +I + S D+   +W
Sbjct: 245 LTWSPDGTKIASASADKTIKIW 266



 Score = 28.7 bits (61), Expect = 4.0
 Identities = 14/63 (22%), Positives = 29/63 (46%)
 Frame = +2

Query: 212 TCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCS 391
           +C A + D+  +A    +++VH+YK  G    +   +V H   +  + ++ N   +V   
Sbjct: 452 SCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIV-HPAEITSVAFSNNGAFLVATD 510

Query: 392 VDR 400
             R
Sbjct: 511 QSR 513


>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
           protein ZK520.3a protein.
          Length = 1383

 Score = 32.3 bits (70), Expect = 0.32
 Identities = 29/140 (20%), Positives = 49/140 (35%), Gaps = 2/140 (1%)
 Frame = +2

Query: 218 HAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVD 397
           H W  +   +A +  NN V  Y K+GN      + +    +++ I W    + +     +
Sbjct: 40  HRWRPNGHTVAVACANNTVIYYDKKGN----VIDALNPTGKLIDIAWDKEGDVLAIAVAN 95

Query: 398 RNA-YVWTQGDDGKWATTLVLLRINRAATCVKWSPMENKFAVGSGARLISICYFEKENNW 574
               Y+W                     TC+ WSP      +G+ A  I +         
Sbjct: 96  TGTIYLWDVNSRNTDTVESGATSSKELPTCLAWSPSTPTLVIGNNAGNIVVYNHRTSRRI 155

Query: 575 WV-SKHIKKPIRSTVTSIDW 631
            V  KH +   + TVT  D+
Sbjct: 156 AVMGKHQRSVTQITVTPEDY 175


>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
           protein ZK520.3a protein.
          Length = 1383

 Score = 32.3 bits (70), Expect = 0.32
 Identities = 29/140 (20%), Positives = 49/140 (35%), Gaps = 2/140 (1%)
 Frame = +2

Query: 218 HAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVD 397
           H W  +   +A +  NN V  Y K+GN      + +    +++ I W    + +     +
Sbjct: 40  HRWRPNGHTVAVACANNTVIYYDKKGN----VIDALNPTGKLIDIAWDKEGDVLAIAVAN 95

Query: 398 RNA-YVWTQGDDGKWATTLVLLRINRAATCVKWSPMENKFAVGSGARLISICYFEKENNW 574
               Y+W                     TC+ WSP      +G+ A  I +         
Sbjct: 96  TGTIYLWDVNSRNTDTVESGATSSKELPTCLAWSPSTPTLVIGNNAGNIVVYNHRTSRRI 155

Query: 575 WV-SKHIKKPIRSTVTSIDW 631
            V  KH +   + TVT  D+
Sbjct: 156 AVMGKHQRSVTQITVTPEDY 175


>Z81490-1|CAB04014.1|  510|Caenorhabditis elegans Hypothetical
           protein CC4.3 protein.
          Length = 510

 Score = 32.3 bits (70), Expect = 0.32
 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
 Frame = +2

Query: 224 WNKDRSQIAFSPNNNEVHIY-KKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDR 400
           ++KD S I    N++ V ++  K G   K+      H   +  + ++   N I++CS D 
Sbjct: 315 FSKDNSHILSGGNDHVVRVHGMKSGKCLKEMRG---HSSYITDVRYSDEGNHIISCSTDG 371

Query: 401 NAYVWTQGDDGKWATT 448
           +  VW  G  G+  +T
Sbjct: 372 SIRVW-HGKSGECLST 386


>Z80215-3|CAB02270.1|  496|Caenorhabditis elegans Hypothetical
           protein C36B1.5 protein.
          Length = 496

 Score = 32.3 bits (70), Expect = 0.32
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = +2

Query: 302 WKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGD 427
           W+    L  HD R++ +D +P+   + + + DR   +W Q D
Sbjct: 454 WQPLRQLQGHDTRILCVDISPDGQWMCSSAFDRTFKLWAQSD 495


>Z47358-8|CAA87433.1|  702|Caenorhabditis elegans Hypothetical
           protein ZK1307.6 protein.
          Length = 702

 Score = 32.3 bits (70), Expect = 0.32
 Identities = 24/107 (22%), Positives = 37/107 (34%)
 Frame = +2

Query: 209 ITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTC 388
           + C AWN D   I     +  +       +D      L  H   V G+ W+P+   + + 
Sbjct: 483 VGCLAWNADT--ICSGSRDRTIMHRDIRCDDNDMGRKLTNHRQEVCGLKWSPDKQLLASG 540

Query: 389 SVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMENKFAVGSG 529
             D    VW    +    T     + N A   + WSP  +   V  G
Sbjct: 541 GNDNQLLVWNLRRNEPIQT---YTQHNAAVKALAWSPHHHGLLVSGG 584


>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
          Length = 1383

 Score = 32.3 bits (70), Expect = 0.32
 Identities = 29/140 (20%), Positives = 49/140 (35%), Gaps = 2/140 (1%)
 Frame = +2

Query: 218 HAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVD 397
           H W  +   +A +  NN V  Y K+GN      + +    +++ I W    + +     +
Sbjct: 40  HRWRPNGHTVAVACANNTVIYYDKKGN----VIDALNPTGKLIDIAWDKEGDVLAIAVAN 95

Query: 398 RNA-YVWTQGDDGKWATTLVLLRINRAATCVKWSPMENKFAVGSGARLISICYFEKENNW 574
               Y+W                     TC+ WSP      +G+ A  I +         
Sbjct: 96  TGTIYLWDVNSRNTDTVESGATSSKELPTCLAWSPSTPTLVIGNNAGNIVVYNHRTSRRI 155

Query: 575 WV-SKHIKKPIRSTVTSIDW 631
            V  KH +   + TVT  D+
Sbjct: 156 AVMGKHQRSVTQITVTPEDY 175


>AL110500-12|CAB60432.1|  362|Caenorhabditis elegans Hypothetical
           protein Y87G2A.11 protein.
          Length = 362

 Score = 32.3 bits (70), Expect = 0.32
 Identities = 42/186 (22%), Positives = 72/186 (38%), Gaps = 22/186 (11%)
 Frame = +2

Query: 170 MAQTLTFGDSCAPITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDW---KQTNNLVEHDLR 340
           M++ L FG  C      +   D   I F    N +   K + N      + + L+    R
Sbjct: 1   MSECLMFGMDCEARCMTSMTADEENICFLVGTNNIKNDKNQVNKLFMDPEASRLMSKTFR 60

Query: 341 -----VMGIDWAPNTNRIV-TCSVDRNAY-------VWTQGDDGKWATTLVLLRINRAAT 481
                V  I   P  + I+ TC+ D ++        +W   +D +   T+  L   +  +
Sbjct: 61  HPAGEVRAIAAHPTKSTILATCTADFSSLGGTHSITIWNIEEDKRTLETVSRLPTEQVMS 120

Query: 482 CVKWSPMENKFAVGSGARLISICYFEKENNWWVSKHIKKPIRS---TVTSIDW---HPNN 643
           C++W P   K A  +  R   I     EN   + +++K P+ +    + S  W   H  N
Sbjct: 121 CLEWEPNSMKCAAMTPFR-PEIQLLNMENGPEIVQNLKIPLENEEDEMFSATWSPHHDGN 179

Query: 644 ILLVAG 661
           +L V G
Sbjct: 180 MLGVTG 185


>AF330595-1|AAK00353.1|  510|Caenorhabditis elegans SMU-1 protein.
          Length = 510

 Score = 32.3 bits (70), Expect = 0.32
 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
 Frame = +2

Query: 224 WNKDRSQIAFSPNNNEVHIY-KKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDR 400
           ++KD S I    N++ V ++  K G   K+      H   +  + ++   N I++CS D 
Sbjct: 315 FSKDNSHILSGGNDHVVRVHGMKSGKCLKEMRG---HSSYITDVRYSDEGNHIISCSTDG 371

Query: 401 NAYVWTQGDDGKWATT 448
           +  VW  G  G+  +T
Sbjct: 372 SIRVW-HGKSGECLST 386


>U23412-5|AAK21467.2|  492|Caenorhabditis elegans Hypothetical
           protein T10F2.4 protein.
          Length = 492

 Score = 31.9 bits (69), Expect = 0.43
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = +2

Query: 302 WKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWT 418
           W +  +L +H   V G+ +  N   +VTCS+D++  V++
Sbjct: 453 WSEVVSLSDHSGPVTGVRFGENARSLVTCSLDKSLRVFS 491


>Z79756-4|CAB02116.2|  478|Caenorhabditis elegans Hypothetical
           protein F53C11.7 protein.
          Length = 478

 Score = 31.1 bits (67), Expect = 0.75
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
 Frame = +2

Query: 206 PITCHAWNK-DRSQIA-FSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNT-NR 376
           P+   AWN+ D + IA F  ++ EV I             L  H+  + G+ WAP++ + 
Sbjct: 359 PLLRLAWNRNDHNYIATFGQDSKEVLILDLR-LPCTPVARLRNHEATINGLSWAPHSGSH 417

Query: 377 IVTCSVDRNAYVW 415
           I T   D  A +W
Sbjct: 418 ICTAGDDYQALIW 430


>AL021481-1|CAA16333.1|  363|Caenorhabditis elegans Hypothetical
           protein Y43F4B.4 protein.
          Length = 363

 Score = 31.1 bits (67), Expect = 0.75
 Identities = 26/118 (22%), Positives = 49/118 (41%), Gaps = 11/118 (9%)
 Frame = +2

Query: 350 IDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMENKFAVGSG 529
           + + P+  R+ TC+ D    +W +  DG W  +        A   V W+  E    V + 
Sbjct: 23  VSFDPHGRRMATCASDMTMAIWDRKPDGNWRRSAHWKCHGGAVWRVIWAHPEFGQIVATC 82

Query: 530 ARLISICYFEKE-----------NNWWVSKHIKKPIRSTVTSIDWHPNNILLVAGSAD 670
           +   +I  +E++            + W+ + I    RS VT I + P ++ L+  S +
Sbjct: 83  SYDRTIVIWEEQIVRSEKDLKQKESQWIRRTIISDNRSDVTDICFSPRHLGLMMASCN 140



 Score = 29.9 bits (64), Expect = 1.7
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = +2

Query: 284 KKEGNDWKQTNNLVEHDLRVMGIDWA-PNTNRIV-TCSVDRNAYVWTQ 421
           K +GN W+++ +   H   V  + WA P   +IV TCS DR   +W +
Sbjct: 47  KPDGN-WRRSAHWKCHGGAVWRVIWAHPEFGQIVATCSYDRTIVIWEE 93


>U23139-7|AAK31492.1|  929|Caenorhabditis elegans Hypothetical
           protein F13H8.2 protein.
          Length = 929

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 19/51 (37%), Positives = 26/51 (50%)
 Frame = +2

Query: 263 NNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 415
           NN   +Y    N  K   +L  H L V  +D AP++   VT SVD++  VW
Sbjct: 565 NNTCSVYFV--NTLKFFVSLYGHSLPVTCVDIAPSSKLCVTGSVDKSVKVW 613


>AC006708-15|AAF60425.1|  504|Caenorhabditis elegans Hypothetical
           protein Y110A7A.8 protein.
          Length = 504

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
 Frame = -1

Query: 427 ISLSPDVSITV-NRTRNNTVGVGS-PINPHHSKVVFHKVVCLLP 302
           ++  P  ++ V  +T+ N +G  +   NPHH  + FH++V  +P
Sbjct: 250 LATMPSCNVQVLGKTKKNLIGFSTVSTNPHHGFIYFHQLVQKMP 293


>U23176-7|AAC46713.4|  454|Caenorhabditis elegans Hypothetical
           protein F21H12.1 protein.
          Length = 454

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 9/33 (27%), Positives = 20/33 (60%)
 Frame = +2

Query: 185 TFGDSCAPITCHAWNKDRSQIAFSPNNNEVHIY 283
           TF   C P++C +W++D  ++  S  +N + ++
Sbjct: 62  TFSAHCLPVSCLSWSRDGRKLLTSSADNSIAMF 94


>U58762-2|AAK39302.1|  722|Caenorhabditis elegans Hypothetical
           protein T27F7.2b protein.
          Length = 722

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
 Frame = -2

Query: 675 LKSAEPATSKMLLGCQSIDVTVERMGFLICLDTHQLFSFSK*QI-DINLAPDPTANLFSM 499
           + S +P TS    G QS+++++  +G  IC +   L S S  ++ DI+  PD T N+   
Sbjct: 167 IDSFQPTTSG---GMQSVELSISVLGVKICCEKTVLMSHSLRRVTDISARPD-TQNI--- 219

Query: 498 GDHFTQVAARLIRRRTRV 445
           G   T+   R  RR   V
Sbjct: 220 GYVATEPVGRTYRRLCHV 237


>U58762-1|AAK39301.1|  732|Caenorhabditis elegans Hypothetical
           protein T27F7.2a protein.
          Length = 732

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
 Frame = -2

Query: 675 LKSAEPATSKMLLGCQSIDVTVERMGFLICLDTHQLFSFSK*QI-DINLAPDPTANLFSM 499
           + S +P TS    G QS+++++  +G  IC +   L S S  ++ DI+  PD T N+   
Sbjct: 177 IDSFQPTTSG---GMQSVELSISVLGVKICCEKTVLMSHSLRRVTDISARPD-TQNI--- 229

Query: 498 GDHFTQVAARLIRRRTRV 445
           G   T+   R  RR   V
Sbjct: 230 GYVATEPVGRTYRRLCHV 247


>U21321-1|AAG00051.1|  507|Caenorhabditis elegans Fizzy (cdc20
           protein family) homologprotein 1 protein.
          Length = 507

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = +2

Query: 263 NNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 415
           N++V I +   + W   N    H   V  ++W+ + N  V+ S DR A +W
Sbjct: 295 NHDVRISQHVVSSWGGDNG---HCRDVTALEWSADENMCVSGSSDRTAKIW 342


>AF067942-4|AAG45573.2|  324|Caenorhabditis elegans Hypothetical
           protein ZK6.6 protein.
          Length = 324

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 570 IGGCLSILRSPFVRL*HLLIGIPI 641
           +G C     SPF+ L H +IGIP+
Sbjct: 255 LGSCFIFFLSPFLNLYHYVIGIPL 278


>Z66561-2|CAA91460.1|  331|Caenorhabditis elegans Hypothetical
           protein F08G12.2 protein.
          Length = 331

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 17/82 (20%), Positives = 39/82 (47%)
 Frame = +2

Query: 170 MAQTLTFGDSCAPITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMG 349
           MA T+        I   A++ D + +A S  + ++  +   G + +  + +  H   VM 
Sbjct: 28  MAPTMVLLGHEGEIYTGAFSPDGTCLATSGYDQKIFFWNVYG-ECENFSTIKGHSGAVMD 86

Query: 350 IDWAPNTNRIVTCSVDRNAYVW 415
           + +  +++ +V+C  D++  VW
Sbjct: 87  LKFTTDSSSLVSCGTDKSVRVW 108


>Z31590-4|CAD27606.1|  495|Caenorhabditis elegans Hypothetical
           protein R01H10.3d protein.
          Length = 495

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 5/72 (6%)
 Frame = +2

Query: 329 HDLRVMGIDWAP-NTNRIVTCSVDRNAYVWTQGDDG----KWATTLVLLRINRAATCVKW 493
           H    + + W+P N N I +CS D    VW   D G         + L    +    + W
Sbjct: 78  HKAPCLEVAWSPFNDNVIASCSEDTTCKVWVIPDRGLNRNLSEPAVELTGHQKRVNTIAW 137

Query: 494 SPMENKFAVGSG 529
            P+ N   + +G
Sbjct: 138 HPVANNVLLTAG 149


>Z31590-3|CAD27605.1|  607|Caenorhabditis elegans Hypothetical
           protein R01H10.3c protein.
          Length = 607

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 5/72 (6%)
 Frame = +2

Query: 329 HDLRVMGIDWAP-NTNRIVTCSVDRNAYVWTQGDDG----KWATTLVLLRINRAATCVKW 493
           H    + + W+P N N I +CS D    VW   D G         + L    +    + W
Sbjct: 78  HKAPCLEVAWSPFNDNVIASCSEDTTCKVWVIPDRGLNRNLSEPAVELTGHQKRVNTIAW 137

Query: 494 SPMENKFAVGSG 529
            P+ N   + +G
Sbjct: 138 HPVANNVLLTAG 149


>Z31590-2|CAD27604.1|  538|Caenorhabditis elegans Hypothetical
           protein R01H10.3b protein.
          Length = 538

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 5/72 (6%)
 Frame = +2

Query: 329 HDLRVMGIDWAP-NTNRIVTCSVDRNAYVWTQGDDG----KWATTLVLLRINRAATCVKW 493
           H    + + W+P N N I +CS D    VW   D G         + L    +    + W
Sbjct: 78  HKAPCLEVAWSPFNDNVIASCSEDTTCKVWVIPDRGLNRNLSEPAVELTGHQKRVNTIAW 137

Query: 494 SPMENKFAVGSG 529
            P+ N   + +G
Sbjct: 138 HPVANNVLLTAG 149


>Z31590-1|CAA83461.1|  605|Caenorhabditis elegans Hypothetical
           protein R01H10.3a protein.
          Length = 605

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 5/72 (6%)
 Frame = +2

Query: 329 HDLRVMGIDWAP-NTNRIVTCSVDRNAYVWTQGDDG----KWATTLVLLRINRAATCVKW 493
           H    + + W+P N N I +CS D    VW   D G         + L    +    + W
Sbjct: 78  HKAPCLEVAWSPFNDNVIASCSEDTTCKVWVIPDRGLNRNLSEPAVELTGHQKRVNTIAW 137

Query: 494 SPMENKFAVGSG 529
            P+ N   + +G
Sbjct: 138 HPVANNVLLTAG 149


>Z81531-5|CAB04319.1| 1152|Caenorhabditis elegans Hypothetical protein
            F36D3.5 protein.
          Length = 1152

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = +2

Query: 275  HIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDD 430
            HI+  E  D K TN+ +E    +   + APNT  ++    D N  + T   D
Sbjct: 931  HIWMDERTDNKITNDFMEKFQAITSDEAAPNTTHVIV-KTDENGVLETDDLD 981


>Z49127-9|CAA88948.1|  340|Caenorhabditis elegans Hypothetical
           protein F13D12.7 protein.
          Length = 340

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
 Frame = +2

Query: 329 HDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMEN 508
           H  ++  + WA ++  +V+ S D    VW      K     + LR +   TC  ++P  +
Sbjct: 54  HLAKIYAMHWASDSRNLVSASQDGKLIVWDSYTTNK--VHAIPLRSSWVMTCA-YAPSGS 110

Query: 509 KFAVGSGARLISICYFE-KENNWWVSKHI 592
             A G    + SI   + +E N  VS+ +
Sbjct: 111 FVACGGLDNICSIYSLKTREGNVRVSREL 139


>X17497-1|CAA35532.1|  340|Caenorhabditis elegans G-protein protein.
          Length = 340

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
 Frame = +2

Query: 329 HDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMEN 508
           H  ++  + WA ++  +V+ S D    VW      K     + LR +   TC  ++P  +
Sbjct: 54  HLAKIYAMHWASDSRNLVSASQDGKLIVWDSYTTNK--VHAIPLRSSWVMTCA-YAPSGS 110

Query: 509 KFAVGSGARLISICYFE-KENNWWVSKHI 592
             A G    + SI   + +E N  VS+ +
Sbjct: 111 FVACGGLDNICSIYSLKTREGNVRVSREL 139


>AF291846-1|AAK55963.1|  340|Caenorhabditis elegans heterotrimeric G
           protein beta subunit1 protein.
          Length = 340

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
 Frame = +2

Query: 329 HDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMEN 508
           H  ++  + WA ++  +V+ S D    VW      K     + LR +   TC  ++P  +
Sbjct: 54  HLAKIYAMHWASDSRNLVSASQDGKLIVWDSYTTNK--VHAIPLRSSWVMTCA-YAPSGS 110

Query: 509 KFAVGSGARLISICYFE-KENNWWVSKHI 592
             A G    + SI   + +E N  VS+ +
Sbjct: 111 FVACGGLDNICSIYSLKTREGNVRVSREL 139


>Z81523-5|CAB04240.2|  298|Caenorhabditis elegans Hypothetical
           protein F32H2.4 protein.
          Length = 298

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 29/146 (19%), Positives = 58/146 (39%), Gaps = 2/146 (1%)
 Frame = +2

Query: 239 SQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRV--MGIDWAPNTNRIVTCSVDRNAYV 412
           + +  + +  +V I K  G   +   ++  H  +V  + +  + +  ++   + D +  +
Sbjct: 143 NHVFVAESGGKVEILKFAGGALEPVTSIQAHSHQVECLAVSISKDGRKLAVGASDASCSL 202

Query: 413 WTQGDDGKWATTLVLLRINRAATCVKWSPMENKFAVGSGARLISICYFEKENNWWVSKHI 592
           W   D  +     V+ R +     V +S      A GS    I I Y    +     KH 
Sbjct: 203 W---DLEELICERVIPRHDYGIRAVSFSCNGQLLASGSEDHSIDIAYVPDGSRCHEIKHT 259

Query: 593 KKPIRSTVTSIDWHPNNILLVAGSAD 670
            +       S+ WHPN++LL   ++D
Sbjct: 260 GETY-----SVAWHPNSLLLAYTASD 280


>Z81513-13|CAB04180.2| 1213|Caenorhabditis elegans Hypothetical
            protein F26D2.10 protein.
          Length = 1213

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = +2

Query: 275  HIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDD 430
            HI+  E  D K TN+ +E    +   + APNT  ++    D N  + T   D
Sbjct: 992  HIWMDEITDNKITNDFMEKFQAITSDEAAPNTTHVIV-KTDENGVLDTDNLD 1042


>AF106576-4|AAC78176.1|  473|Caenorhabditis elegans Hypothetical
           protein W07E6.2 protein.
          Length = 473

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 14/72 (19%), Positives = 32/72 (44%)
 Frame = +2

Query: 206 PITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVT 385
           P+   AW+ D   +     ++ + +++ +        +L  H   V  +DW+P   ++V+
Sbjct: 404 PVYQVAWSADSRLLVSGSADSTLKVFELKTKSLYY--DLPGHGDEVFTVDWSPEGTKVVS 461

Query: 386 CSVDRNAYVWTQ 421
              D+   +W Q
Sbjct: 462 GGKDKVLKLWRQ 473


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,148,041
Number of Sequences: 27780
Number of extensions: 360353
Number of successful extensions: 998
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 982
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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